Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060719.seq
(647 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical ... 38 0.005
AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility... 38 0.005
U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical pr... 36 0.025
DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determini... 36 0.025
Z81057-3|CAB02916.1| 168|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 33 0.23
U97552-5|AAQ01520.1| 605|Caenorhabditis elegans Hypothetical pr... 33 0.23
U97552-4|AAX55684.1| 666|Caenorhabditis elegans Hypothetical pr... 33 0.23
U97552-3|AAQ01521.1| 663|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z70684-8|CAA94603.2| 360|Caenorhabditis elegans Hypothetical pr... 32 0.30
Z83228-5|CAB05731.1| 148|Caenorhabditis elegans Hypothetical pr... 31 0.53
X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomera... 31 0.53
U97006-5|AAC47967.1| 222|Caenorhabditis elegans Hypothetical pr... 31 0.53
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 31 0.53
U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical p... 30 1.6
Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z93385-5|CAB07639.1| 734|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical p... 29 2.1
Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical pr... 29 2.1
AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical ... 29 2.1
Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical p... 29 2.8
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 29 2.8
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 29 2.8
Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical pr... 29 3.8
U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical pr... 29 3.8
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 29 3.8
U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical pr... 29 3.8
AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical ... 29 3.8
Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical pr... 28 5.0
L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome cond... 28 5.0
AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical ... 28 5.0
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 28 5.0
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 5.0
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 5.0
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 5.0
Z78198-3|CAB01569.1| 1010|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z68882-10|CAA93111.1| 397|Caenorhabditis elegans Hypothetical p... 28 6.6
U53335-7|AAA96172.2| 150|Caenorhabditis elegans Hypothetical pr... 28 6.6
L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans chrom... 28 6.6
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 28 6.6
AC006810-1|AAF59633.1| 182|Caenorhabditis elegans Hypothetical ... 28 6.6
U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical pr... 27 8.7
>AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical
protein Y17G7A.1 protein.
Length = 315
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/61 (39%), Positives = 32/61 (52%)
Frame = +1
Query: 73 MSDDGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGR 252
++D GS+ V KKGRGRP N + L K+GR A + D +PV K+GR
Sbjct: 111 VNDTGSSPV-KKGRGRPIKNPSADAGSPLVKKGRGRRAQTPAADTDAIDTASSPV-KKGR 168
Query: 253 G 255
G
Sbjct: 169 G 169
Score = 37.5 bits (83), Expect = 0.008
Identities = 28/74 (37%), Positives = 35/74 (47%)
Frame = +1
Query: 79 DDGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGD 258
D S+ V KKGRGRP N + L K+GR A + D +PV K+GRG
Sbjct: 158 DTASSPV-KKGRGRPAKNPSADAGSPLVKKGRGRQAKNLAADTDAIDTASSPV-KKGRGR 215
Query: 259 QKVPRKKRESRARV 300
P KK + A V
Sbjct: 216 ---PLKKTAAEADV 226
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +1
Query: 121 PKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVA---KRGR 252
P N ++ + + KRGR + + + D E+AP A KRGR
Sbjct: 255 PAVNESEEADEPVLKRGRSVKQPKDESESDDEDAEKAPAAIPKKRGR 301
>AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility
group protein I beta protein.
Length = 315
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/61 (39%), Positives = 32/61 (52%)
Frame = +1
Query: 73 MSDDGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGR 252
++D GS+ V KKGRGRP N + L K+GR A + D +PV K+GR
Sbjct: 111 VNDTGSSPV-KKGRGRPIKNPSADAGSPLVKKGRGRRAQTPAADTDAIDTASSPV-KKGR 168
Query: 253 G 255
G
Sbjct: 169 G 169
Score = 37.5 bits (83), Expect = 0.008
Identities = 28/74 (37%), Positives = 35/74 (47%)
Frame = +1
Query: 79 DDGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGD 258
D S+ V KKGRGRP N + L K+GR A + D +PV K+GRG
Sbjct: 158 DTASSPV-KKGRGRPAKNPSADAGSPLVKKGRGRQAKNLAADTDAIDTASSPV-KKGRGR 215
Query: 259 QKVPRKKRESRARV 300
P KK + A V
Sbjct: 216 ---PLKKTAAEADV 226
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +1
Query: 121 PKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVA---KRGR 252
P N ++ + + KRGR + + + D E+AP A KRGR
Sbjct: 255 PAVNESEEADEPVLKRGRSVKQPKDESESDDEDAEKAPAAIPKKRGR 301
>U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical
protein F52C9.7 protein.
Length = 451
Score = 35.9 bits (79), Expect = 0.025
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 76 SDDGSTV-VEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGR 252
SD+ S VE+K R P + S++ +KR R P R + +S ++ + K
Sbjct: 142 SDESSDERVERKRRRSPSPKRRRRPSEKPRKRSRSPRRERPRSPKRSREESRKLSRKPSS 201
Query: 253 GDQKVPRKKRESRARV 300
K PR+ RE +V
Sbjct: 202 SRSKSPRRSREDPRKV 217
>DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determining
protein MOG-3 protein.
Length = 451
Score = 35.9 bits (79), Expect = 0.025
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 76 SDDGSTV-VEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGR 252
SD+ S VE+K R P + S++ +KR R P R + +S ++ + K
Sbjct: 142 SDESSDERVERKRRRSPSPKRRRRPSEKPRKRSRSPRRERPRSPKRSREESRKLSRKPSS 201
Query: 253 GDQKVPRKKRESRARV 300
K PR+ RE +V
Sbjct: 202 SRSKSPRRSREDPRKV 217
>Z81057-3|CAB02916.1| 168|Caenorhabditis elegans Hypothetical
protein F10D11.4 protein.
Length = 168
Score = 33.5 bits (73), Expect = 0.13
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Frame = +1
Query: 100 EKKGRGRPKANGTQPESK---ELKKRGRPP---AATRTKDSAKSSDDEQAPVAKRGRGDQ 261
+KK R + K +P+ K E+KK +P + AK +E+ P D
Sbjct: 82 KKKERSKKKEKDKKPDEKVEKEVKKEDKPDNNEPLIKNLKIAKKEQEEENPKTDLESHDD 141
Query: 262 KVPRKKRESRARVKVEVVDG 321
+V KK+ESR + K + +G
Sbjct: 142 EVETKKKESRRQKKKKSKEG 161
>Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +1
Query: 139 QPESKELKKRGRP-PAATRTKDSAKSSDDEQAPVAK--RGRGDQKVPRKKRES 288
+P +K + P P A + + S+ SSDDE+ PVAK + K KK ES
Sbjct: 321 KPAAKPTPAKATPKPVAKKAESSSDSSDDEKKPVAKPAPAKATPKPVAKKAES 373
Score = 32.3 bits (70), Expect = 0.30
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +1
Query: 139 QPESKELKKRGRP-PAATRTKDSAKSSDDEQAPVAK--RGRGDQKVPRKKRES 288
+P +K + P P A + + S+ SSDDE+ PVAK + K KK +S
Sbjct: 383 KPAAKPTPAKATPKPVAKKAESSSDSSDDEKKPVAKPTSAKATPKPAAKKADS 435
Score = 31.5 bits (68), Expect = 0.53
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 142 PESKELKKRGRPPAATRTKDSAKSSDDEQAPVAK--RGRGDQKVPRKKRES 288
P K K P A + + S+ SSDDE+ P AK + K KK ES
Sbjct: 292 PAKKTPAKAAPKPVAKKAESSSDSSDDEKKPAAKPTPAKATPKPVAKKAES 342
Score = 30.7 bits (66), Expect = 0.93
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +1
Query: 139 QPESKELKKRGRP-PAATRTKDSAKSSDDEQAPVAK--RGRGDQKVPRKKRES 288
+P +K + P P A + + S+ SSDDE+ P AK + K KK ES
Sbjct: 352 KPVAKPAPAKATPKPVAKKAESSSDSSDDEKKPAAKPTPAKATPKPVAKKAES 404
Score = 30.7 bits (66), Expect = 0.93
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 139 QPESKELKKRGRP-PAATRTKDSAKSSDDEQAPVAK 243
+P +K P P A + + S+ SSDDE+ PVAK
Sbjct: 505 KPAAKPTPANATPKPVAKKAESSSDSSDDEKKPVAK 540
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +1
Query: 139 QPESKELKKRGRP-PAATRTKDSAKSSDDEQAPVAK--RGRGDQKVPRKKRES 288
+P +K + P P + + S+ SSDDE+ PVAK + K KK +S
Sbjct: 230 KPAAKPTPAKPTPKPVVKKAESSSDSSDDEKKPVAKPAPAKATPKPAAKKADS 282
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 145 ESKELKKRGRPPAATRTKDSAKSSDDEQAPVAK--RGRGDQKVPRKKRES 288
+S K +P A S+ SSDDE+ PVAK + K KK +S
Sbjct: 599 KSTPAKTTPKPTAKKAASSSSDSSDDEKKPVAKPTSAKATPKPAAKKADS 648
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +1
Query: 139 QPESKELKKRGRP-PAATRTKDSAKSSDDEQAPVAKR-GRGDQKVPRKKRES 288
+P +K + P PAA + S+ SSDDE AP K + K KK ES
Sbjct: 414 KPVAKPTSAKATPKPAAKKADSSSDSSDDE-APAKKTPAKAAPKPASKKAES 464
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +1
Query: 139 QPESKELKKRGRP-PAATRTKDSAKSSDDEQAPVAKR-GRGDQKVPRKKRES 288
+P +K + P PAA + S+ SSDDE AP K + K KK ES
Sbjct: 261 KPVAKPAPAKATPKPAAKKADSSSDSSDDE-APAKKTPAKAAPKPVAKKAES 311
>U97552-5|AAQ01520.1| 605|Caenorhabditis elegans Hypothetical
protein W05H7.4a protein.
Length = 605
Score = 32.7 bits (71), Expect = 0.23
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 115 GRPKANGTQPESKELKKRGRPPAATRT-KDSAKSSDDEQAPVAKRGRGDQKVPRKKRESR 291
G P A+G+Q + KR R R +D A D +Q P +R R D++ PR+ SR
Sbjct: 534 GSPNAHGSQYQDPVPTKRARVSRFDRQGEDDAPGQDMDQRP-PRRNRFDEQPPRRTFRSR 592
>U97552-4|AAX55684.1| 666|Caenorhabditis elegans Hypothetical
protein W05H7.4e protein.
Length = 666
Score = 32.7 bits (71), Expect = 0.23
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 115 GRPKANGTQPESKELKKRGRPPAATRT-KDSAKSSDDEQAPVAKRGRGDQKVPRKKRESR 291
G P A+G+Q + KR R R +D A D +Q P +R R D++ PR+ SR
Sbjct: 595 GSPNAHGSQYQDPVPTKRARVSRFDRQGEDDAPGQDMDQRP-PRRNRFDEQPPRRTFRSR 653
>U97552-3|AAQ01521.1| 663|Caenorhabditis elegans Hypothetical
protein W05H7.4b protein.
Length = 663
Score = 32.7 bits (71), Expect = 0.23
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 115 GRPKANGTQPESKELKKRGRPPAATRT-KDSAKSSDDEQAPVAKRGRGDQKVPRKKRESR 291
G P A+G+Q + KR R R +D A D +Q P +R R D++ PR+ SR
Sbjct: 592 GSPNAHGSQYQDPVPTKRARVSRFDRQGEDDAPGQDMDQRP-PRRNRFDEQPPRRTFRSR 650
>Z70684-8|CAA94603.2| 360|Caenorhabditis elegans Hypothetical
protein F28D1.8 protein.
Length = 360
Score = 32.3 bits (70), Expect = 0.30
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +1
Query: 79 DDGSTVVEKKGRGRPKANGTQPES--KELKKRGRPPAATRTKDSA-KSSDDEQAPVAKRG 249
DDGS G K GT +S K KK+ + K A K +++ V+K
Sbjct: 281 DDGSVDGTTAGSTESKGPGTTSKSTDKGKKKKKTKKGGKKKKSGAGKGKGKKKSKVSKEK 340
Query: 250 RGDQKVPRKKRESRARVK 303
+G +KV +KK S+ K
Sbjct: 341 KGGKKVQKKKPASKPTKK 358
>Z83228-5|CAB05731.1| 148|Caenorhabditis elegans Hypothetical
protein F52F12.5 protein.
Length = 148
Score = 31.5 bits (68), Expect = 0.53
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Frame = +1
Query: 70 TMSDDGSTVVEKK-GRGRPKANGTQPESKELKKRGRPPAATRTK----DSAKSSDDEQAP 234
++S+D V EKK +G K + T+ +SKE K+ + + K +S +++
Sbjct: 17 SLSEDDDPVKEKKKSKGNEKKSSTESKSKESKETSKEEDLAQKKFLMTQKTQSMTEDEKE 76
Query: 235 VAKRGRGDQKVPRKK--RESRARVKVE 309
V + QK P+K ES ++K E
Sbjct: 77 VKPKAPESQK-PKKNSAEESNEKIKKE 102
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +1
Query: 70 TMSDDGSTVVEKKGRG-RPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKR 246
+M++D V K +PK N + ++++KK G T K + P+A
Sbjct: 69 SMTEDEKEVKPKAPESQKPKKNSAEESNEKIKKEGSVKVET-VASKVKPASSRVPPIAST 127
Query: 247 -GRGDQKVPRKKRES 288
G+G +KK+ +
Sbjct: 128 PGKGSVDGEQKKKST 142
>X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomerase
protein.
Length = 806
Score = 31.5 bits (68), Expect = 0.53
Identities = 19/75 (25%), Positives = 33/75 (44%)
Frame = +1
Query: 79 DDGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGD 258
D+ T +++ + R + + E +E KKR + K DDE + D
Sbjct: 144 DEAPTTDDEEEQKRKEKERRKKEKREKKKRKEKKRLEKENRKIKEEDDEDSD----DEDD 199
Query: 259 QKVPRKKRESRARVK 303
+K +KKR+S+ K
Sbjct: 200 EKAKKKKRKSKGAEK 214
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +1
Query: 100 EKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPRKK 279
EKK + R +G+ + + +KR + KD S+D+ P K+ + + K +K
Sbjct: 53 EKKQKKRKAESGSDEDDYKPEKRKSSAKNGKKKDVGSDSEDDYKPEKKKSKKNNK--KKA 110
Query: 280 RES 288
+ES
Sbjct: 111 QES 113
>U97006-5|AAC47967.1| 222|Caenorhabditis elegans Hypothetical
protein C13F10.7 protein.
Length = 222
Score = 31.5 bits (68), Expect = 0.53
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 103 KKGRGRPKANGTQPESKELKKRGRPPAATRT-KDSAKSSDDEQAPVAKRGRGDQKVPRKK 279
KK + K + E KE KK + R D + SD+E+ K+ + +K RK+
Sbjct: 136 KKKAKKEKKKAKKLEKKERKKERKEKRRRRDDSDDSSDSDEEEDRKRKKSKESKKEKRKR 195
Query: 280 RES 288
R S
Sbjct: 196 RHS 198
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 31.5 bits (68), Expect = 0.53
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +1
Query: 103 KKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPRK 276
K+GRGRP++ T +++ + AA R+K A+S ++E+ + + +K P+K
Sbjct: 572 KRGRGRPRSRSTMSITEDSEPSTSSTAAKRSK-RAESDEEEEQDLKLTNKSPEK-PKK 627
>U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical
protein F32E10.6 protein.
Length = 374
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/63 (22%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 100 EKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVA-KRGRGDQKVPRK 276
+K + + + + E +E+K++ ++ TK +A D+E+ PVA K+ + ++
Sbjct: 190 KKSAKSKDDDSSDEEEEEEVKEKSPKKSSKSTKRAASDDDEEEEPVATKKSKKSKRAETP 249
Query: 277 KRE 285
+ E
Sbjct: 250 EEE 252
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 142 PESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPRKKRESRAR 297
P K KK+G + K SAKS DD+ + + +K P+K +S R
Sbjct: 175 PVKKSNKKKGSKKSP---KKSAKSKDDDSSDEEEEEEVKEKSPKKSSKSTKR 223
>Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/81 (19%), Positives = 42/81 (51%)
Frame = +1
Query: 76 SDDGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRG 255
S D K+ R R + ++ ++ ++R R + R +D +S ++P +R +
Sbjct: 336 SRDNKDRDRKRSRSRDRRRRSKSRDRK-RERSRSRSKDRKRDKKRSRS--RSPEKRRDKE 392
Query: 256 DQKVPRKKRESRARVKVEVVD 318
D+K +K+ E+ + ++ ++++
Sbjct: 393 DRKTEKKENENESSLREKLLE 413
>Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/81 (19%), Positives = 42/81 (51%)
Frame = +1
Query: 76 SDDGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRG 255
S D K+ R R + ++ ++ ++R R + R +D +S ++P +R +
Sbjct: 336 SRDNKDRDRKRSRSRDRRRRSKSRDRK-RERSRSRSKDRKRDKKRSRS--RSPEKRRDKE 392
Query: 256 DQKVPRKKRESRARVKVEVVD 318
D+K +K+ E+ + ++ ++++
Sbjct: 393 DRKTEKKENENESSLREKLLE 413
>Z93385-5|CAB07639.1| 734|Caenorhabditis elegans Hypothetical
protein M01E5.5b protein.
Length = 734
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +1
Query: 100 EKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPRKK 279
EKK + R +G+ + + +KR + KD S+D+ P K+ + + K +K
Sbjct: 53 EKKQKKRKAESGSDEDDYKPEKRKSSAKNGKKKDVGSDSEDDYKPEKKKSKKNNK--KKA 110
Query: 280 RES 288
+ES
Sbjct: 111 QES 113
>Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical
protein M01E5.5a protein.
Length = 806
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +1
Query: 100 EKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPRKK 279
EKK + R +G+ + + +KR + KD S+D+ P K+ + + K +K
Sbjct: 53 EKKQKKRKAESGSDEDDYKPEKRKSSAKNGKKKDVGSDSEDDYKPEKKKSKKNNK--KKA 110
Query: 280 RES 288
+ES
Sbjct: 111 QES 113
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = +1
Query: 76 SDDGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRG 255
+DD K+ R K + E KE K+ + + +D + SDDE AK+ +
Sbjct: 149 TDDEEEQKRKEKERRKKEKREKKERKEKKRLEKENRKIKEEDD-EDSDDEDDEKAKKKKR 207
Query: 256 DQKVPRKKRESRAR 297
K K + S ++
Sbjct: 208 KSKGAEKSKPSTSK 221
>Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical
protein C25A1.10b protein.
Length = 696
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 145 ESKELKKRGRPPAATRTKDSAKSSDDEQAPVAK--RGRGDQKVPRKKRES 288
+S K +P A S+ SSDDE+ PVAK + K KK +S
Sbjct: 324 KSTPAKTTPKPTAKKAASSSSDSSDDEKKPVAKPTSAKATPKPAAKKADS 373
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 139 QPESKELKKRGRP-PAATRTKDSAKSSDDEQAPVAK 243
+P +K + P P + + S+ SSDDE+ PVAK
Sbjct: 230 KPAAKPTPAKPTPKPVVKKAESSSDSSDDEKKPVAK 265
>Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical
protein C54G10.2 protein.
Length = 839
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +1
Query: 142 PESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPRKKRESRARV 300
P ++E +K+ PA RTK + DDE+ A + + K RK+ + + +
Sbjct: 18 PFTQEKQKKAATPAKKRTKPVVLTDDDEEEENAPQKKTAPKRSRKQEKEESDI 70
>AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical
protein W09G12.7 protein.
Length = 368
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/80 (22%), Positives = 36/80 (45%)
Frame = +1
Query: 76 SDDGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRG 255
SDD S + + + + K K + + ++ + S SSDDE+ K+ +
Sbjct: 138 SDDSSDSSDSSDSSDSSDDDKKKKKKSKKSKNKGSSSDSSDSSDDSSDDEK---PKKKKK 194
Query: 256 DQKVPRKKRESRARVKVEVV 315
K P+K +S V ++++
Sbjct: 195 KSKKPKKAPKSDEEVTIKII 214
>Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical
protein R10D12.10 protein.
Length = 497
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 121 PKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPRKKRE 285
P N P++K K R PP TK S+ SS Q P + + K+P + ++
Sbjct: 429 PSTNAL-PKAKPKKIRTLPPKQKHTKTSSTSSVSHQTPPSPIKKPSPKLPAQVKK 482
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/81 (25%), Positives = 34/81 (41%)
Frame = +1
Query: 76 SDDGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRG 255
SD + +KK R + + Q E E KK+ + KD K DDE+ + +
Sbjct: 110 SDSSDSSEDKKKRKQMRDKKKQEE--EDKKKEEEEKDKKKKDKKKEEDDEEEEQKDKKKK 167
Query: 256 DQKVPRKKRESRARVKVEVVD 318
D+K E + + K + D
Sbjct: 168 DEKNDDDDEEDKKKDKKKKKD 188
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/72 (23%), Positives = 32/72 (44%)
Frame = +1
Query: 73 MSDDGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGR 252
+ +D ++K K + + K+ ++R + K AK +DE+ AKR
Sbjct: 144 LEEDKKKEEKRKEAEEKKKKDEEEKMKKDEERNKRKKEEEEKKEAKRREDEEKKEAKRKE 203
Query: 253 GDQKVPRKKRES 288
+ RK+R+S
Sbjct: 204 EEAIEERKRRQS 215
>Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +1
Query: 130 NGTQPESKELKKRGR---PPAATRTKDSAKSSDDEQAPVAKRGRGDQK 264
+G + + E+K G PP + + DDE AP KR GD +
Sbjct: 14 SGNEESTVEVKVNGEAQNPPQESAKPAESVEDDDEPAPAKKRSGGDSE 61
>Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +1
Query: 130 NGTQPESKELKKRGR---PPAATRTKDSAKSSDDEQAPVAKRGRGDQK 264
+G + + E+K G PP + + DDE AP KR GD +
Sbjct: 14 SGNEESTVEVKVNGEAQNPPQESAKPAESVEDDDEPAPAKKRSGGDSE 61
>U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical
protein T09B4.5a protein.
Length = 327
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +1
Query: 118 RPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPR 273
+ K + + +K +K + PA RT + K+ + A RGR K P+
Sbjct: 25 KTKMSKSPSPAKSARKASKSPARARTSNVKKTPSRSASKSATRGRTASKTPK 76
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/74 (24%), Positives = 33/74 (44%)
Frame = +1
Query: 82 DGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQ 261
DG E+K + K +G + E + ++ KD+ + D+E+ K + D+
Sbjct: 83 DGDKKEEEK-KDEEKKDGDKKEDDKKDEKKDEDKKDEKKDADEKKDEEKKDDKKDEKKDE 141
Query: 262 KVPRKKRESRARVK 303
K KK E + + K
Sbjct: 142 KKDEKKDEKKEKSK 155
>U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical
protein D1014.5 protein.
Length = 727
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/77 (24%), Positives = 33/77 (42%)
Frame = +1
Query: 70 TMSDDGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRG 249
T SD+ +T EKK G ++ E K + P T ++ +EQ +
Sbjct: 245 TTSDESATTTEKKTNGAELVEKSETEEKNGDSSTKSPEVTSESSVDTTTIEEQ--LKSNN 302
Query: 250 RGDQKVPRKKRESRARV 300
+++V ++ES RV
Sbjct: 303 DEEKQVDGNEKESTFRV 319
>AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical
protein Y106G6D.3 protein.
Length = 555
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 118 RPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAK-RGRGDQKVPRKKRESRA 294
R + ++ S+ K + + R+ KSS + + K + R Q+ RKKRES
Sbjct: 37 RSNSRNSRKSSRSNKSKRSQRSKRRSAQRKKSSSRRKKKLRKEKSRKSQRSKRKKRESER 96
Query: 295 RVK 303
R K
Sbjct: 97 RKK 99
>Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical protein
R13G10.1 protein.
Length = 1469
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 145 ESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGR 252
+ +L + R P ATR + S + SD++ PV +R R
Sbjct: 1400 DDSDLPEFNRFPPATRRELSVEDSDEDDEPVRRRPR 1435
>L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome
condensation protein protein.
Length = 1469
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 145 ESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGR 252
+ +L + R P ATR + S + SD++ PV +R R
Sbjct: 1400 DDSDLPEFNRFPPATRRELSVEDSDEDDEPVRRRPR 1435
>AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical
protein F09D1.1 protein.
Length = 602
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 139 QPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPRKKRESRAR 297
+P+S E +R R KD +S DD + R D+K R + SR+R
Sbjct: 5 EPKSPEKVERRRSTQEDSEKDKKRSRDDRKTEKRTHDR-DRKRNRSRSRSRSR 56
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/74 (24%), Positives = 33/74 (44%)
Frame = +1
Query: 82 DGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQ 261
DG E+K + K +G + E + ++ KD+ + D+E+ K + D+
Sbjct: 83 DGDKKEEEK-KDEEKKDGDKKEDDKKDEKKDEDKKDEKKDADEKKDEEKKDDKKDEKKDE 141
Query: 262 KVPRKKRESRARVK 303
K KK +S+ K
Sbjct: 142 KKDEKKEKSKKSKK 155
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +1
Query: 169 GRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPRKKRESRARVKVE 309
GRPP K S +SS+ + P G + PRK E + + E
Sbjct: 357 GRPPRGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESSESREE 403
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +1
Query: 169 GRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPRKKRESRARVKVE 309
GRPP K S +SS+ + P G + PRK E + + E
Sbjct: 378 GRPPRGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESSESREE 424
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +1
Query: 169 GRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPRKKRESRARVKVE 309
GRPP K S +SS+ + P G + PRK E + + E
Sbjct: 363 GRPPRGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESSESREE 409
>Z78198-3|CAB01569.1| 1010|Caenorhabditis elegans Hypothetical
protein F55C5.4 protein.
Length = 1010
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 480 ENKLLFLINGSKLKYLVNSHVSSNLLNYRD 569
E+ L+ +N +LKYL+ SH +SNL+ +D
Sbjct: 583 EDVLIMTLN--RLKYLLQSHSTSNLIAMKD 610
>Z68882-10|CAA93111.1| 397|Caenorhabditis elegans Hypothetical
protein C47E12.7 protein.
Length = 397
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/54 (24%), Positives = 26/54 (48%)
Frame = +1
Query: 154 ELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPRKKRESRARVKVEVV 315
++KKR R A +++ D++ K+G G + K ++ R +K + V
Sbjct: 327 QIKKRAREAAEAARQENGDDVPDDEIAEVKKGNGKKTAVPKVKKGRPLLKAKGV 380
>U53335-7|AAA96172.2| 150|Caenorhabditis elegans Hypothetical
protein C55C3.2 protein.
Length = 150
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 285 LPLFSWNLLVSSTSFSYWCLFIIR 214
LPLF ++L VSS +W F++R
Sbjct: 7 LPLFGFHLRVSSPKIIFWRRFLVR 30
>L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans
chromodomain proteinprotein 1 protein.
Length = 304
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/78 (17%), Positives = 35/78 (44%)
Frame = +1
Query: 76 SDDGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRG 255
+D+ + +KK + + E KK+ ++S + D+E++ + +
Sbjct: 128 TDEEHSSADKKSKAEDEEEVEDDEEPVPKKKKEVQEEPEEEESVEGEDEEESQEVEDLKE 187
Query: 256 DQKVPRKKRESRARVKVE 309
D+K+ ++E V++E
Sbjct: 188 DEKMEEDEKEEEEDVQLE 205
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 151 KELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPRK-KRESRARVK 303
K KK + PAA + +++E+ V + K PRK R+S A+V+
Sbjct: 448 KSPKKSSKKPAAKVESEEPSDNEEEEEEVEESPIKKDKTPRKYSRKSAAKVE 499
>AC006810-1|AAF59633.1| 182|Caenorhabditis elegans Hypothetical
protein Y5H2B.3 protein.
Length = 182
Score = 27.9 bits (59), Expect = 6.6
Identities = 21/74 (28%), Positives = 30/74 (40%)
Frame = +1
Query: 97 VEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRGDQKVPRK 276
+E+K + T P KE K+ + KD K EQ AK +K K
Sbjct: 68 LERKKKALANQKVTDPAKKEHKEHEQ-----EAKDLIKKEKSEQKKEAKEQVNKEKSEEK 122
Query: 277 KRESRARVKVEVVD 318
K+ES R E ++
Sbjct: 123 KKESVKRKSSEKLE 136
>U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical
protein ZK1290.6 protein.
Length = 507
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/67 (23%), Positives = 31/67 (46%)
Frame = +1
Query: 76 SDDGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVAKRGRG 255
+D STV + RGR + +++ R + +R + +S + E++P ++
Sbjct: 211 TDMPSTVSTGRSRGRSVYRRNNVNADVSQRQSRSMSVSRGRSRNRSQNRERSPSIEKSTR 270
Query: 256 DQKVPRK 276
Q V RK
Sbjct: 271 SQHVSRK 277
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,686,408
Number of Sequences: 27780
Number of extensions: 250287
Number of successful extensions: 1147
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1138
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -