Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060718.seq
(472 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 108 8e-24
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 108 8e-24
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 108 8e-24
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 108 8e-24
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 108 8e-24
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 108 8e-24
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 108 8e-24
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 108 8e-24
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 108 8e-24
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 108 8e-24
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 108 8e-24
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 108 8e-24
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 108 8e-24
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 106 3e-23
Z92544-3|CAM26349.1| 438|Homo sapiens rhomboid, veinlet-like 1 ... 31 2.0
Y17108-1|CAA76629.1| 438|Homo sapiens rhomboid-related protein ... 31 2.0
BC120875-1|AAI20876.1| 438|Homo sapiens rhomboid, veinlet-like ... 31 2.0
BC120874-1|AAI20875.1| 438|Homo sapiens rhomboid, veinlet-like ... 31 2.0
AE006464-9|AAK61241.1| 438|Homo sapiens rhomboid related protei... 31 2.0
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 108 bits (260), Expect = 8e-24
Identities = 50/72 (69%), Positives = 53/72 (73%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGXRMFAPTKPXXXXXXXXXXX 435
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 436 XXXAGLCGSVAA 471
+C ++AA
Sbjct: 119 QKRYAICSALAA 130
Score = 68.5 bits (160), Expect = 1e-11
Identities = 33/57 (57%), Positives = 42/57 (73%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSXTVQGAAKPLPFVFKAXIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK + G LP VFKA IRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 108 bits (260), Expect = 8e-24
Identities = 50/72 (69%), Positives = 53/72 (73%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGXRMFAPTKPXXXXXXXXXXX 435
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 436 XXXAGLCGSVAA 471
+C ++AA
Sbjct: 119 QKRYAICSALAA 130
Score = 68.5 bits (160), Expect = 1e-11
Identities = 33/57 (57%), Positives = 42/57 (73%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSXTVQGAAKPLPFVFKAXIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK + G LP VFKA IRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 108 bits (260), Expect = 8e-24
Identities = 50/72 (69%), Positives = 53/72 (73%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGXRMFAPTKPXXXXXXXXXXX 435
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 436 XXXAGLCGSVAA 471
+C ++AA
Sbjct: 119 QKRYAICSALAA 130
Score = 68.5 bits (160), Expect = 1e-11
Identities = 33/57 (57%), Positives = 42/57 (73%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSXTVQGAAKPLPFVFKAXIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK + G LP VFKA IRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 108 bits (260), Expect = 8e-24
Identities = 50/72 (69%), Positives = 53/72 (73%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGXRMFAPTKPXXXXXXXXXXX 435
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 436 XXXAGLCGSVAA 471
+C ++AA
Sbjct: 119 QKRYAICSALAA 130
Score = 68.5 bits (160), Expect = 1e-11
Identities = 33/57 (57%), Positives = 42/57 (73%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSXTVQGAAKPLPFVFKAXIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK + G LP VFKA IRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 108 bits (260), Expect = 8e-24
Identities = 50/72 (69%), Positives = 53/72 (73%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGXRMFAPTKPXXXXXXXXXXX 435
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 436 XXXAGLCGSVAA 471
+C ++AA
Sbjct: 119 QKRYAICSALAA 130
Score = 68.5 bits (160), Expect = 1e-11
Identities = 33/57 (57%), Positives = 42/57 (73%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSXTVQGAAKPLPFVFKAXIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK + G LP VFKA IRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 108 bits (260), Expect = 8e-24
Identities = 50/72 (69%), Positives = 53/72 (73%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGXRMFAPTKPXXXXXXXXXXX 435
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 436 XXXAGLCGSVAA 471
+C ++AA
Sbjct: 119 QKRYAICSALAA 130
Score = 68.5 bits (160), Expect = 1e-11
Identities = 33/57 (57%), Positives = 42/57 (73%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSXTVQGAAKPLPFVFKAXIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK + G LP VFKA IRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 108 bits (260), Expect = 8e-24
Identities = 50/72 (69%), Positives = 53/72 (73%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGXRMFAPTKPXXXXXXXXXXX 435
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 436 XXXAGLCGSVAA 471
+C ++AA
Sbjct: 119 QKRYAICSALAA 130
Score = 68.5 bits (160), Expect = 1e-11
Identities = 33/57 (57%), Positives = 42/57 (73%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSXTVQGAAKPLPFVFKAXIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK + G LP VFKA IRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 108 bits (260), Expect = 8e-24
Identities = 50/72 (69%), Positives = 53/72 (73%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGXRMFAPTKPXXXXXXXXXXX 435
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 436 XXXAGLCGSVAA 471
+C ++AA
Sbjct: 119 QKRYAICSALAA 130
Score = 68.5 bits (160), Expect = 1e-11
Identities = 33/57 (57%), Positives = 42/57 (73%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSXTVQGAAKPLPFVFKAXIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK + G LP VFKA IRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 108 bits (260), Expect = 8e-24
Identities = 50/72 (69%), Positives = 53/72 (73%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGXRMFAPTKPXXXXXXXXXXX 435
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 436 XXXAGLCGSVAA 471
+C ++AA
Sbjct: 119 QKRYAICSALAA 130
Score = 68.5 bits (160), Expect = 1e-11
Identities = 33/57 (57%), Positives = 42/57 (73%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSXTVQGAAKPLPFVFKAXIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK + G LP VFKA IRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 108 bits (260), Expect = 8e-24
Identities = 50/72 (69%), Positives = 53/72 (73%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGXRMFAPTKPXXXXXXXXXXX 435
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 436 XXXAGLCGSVAA 471
+C ++AA
Sbjct: 119 QKRYAICSALAA 130
Score = 68.5 bits (160), Expect = 1e-11
Identities = 33/57 (57%), Positives = 42/57 (73%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSXTVQGAAKPLPFVFKAXIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK + G LP VFKA IRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 108 bits (260), Expect = 8e-24
Identities = 50/72 (69%), Positives = 53/72 (73%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGXRMFAPTKPXXXXXXXXXXX 435
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 436 XXXAGLCGSVAA 471
+C ++AA
Sbjct: 119 QKRYAICSALAA 130
Score = 68.5 bits (160), Expect = 1e-11
Identities = 33/57 (57%), Positives = 42/57 (73%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSXTVQGAAKPLPFVFKAXIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK + G LP VFKA IRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAVSE 56
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 108 bits (260), Expect = 8e-24
Identities = 50/72 (69%), Positives = 53/72 (73%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGXRMFAPTKPXXXXXXXXXXX 435
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK
Sbjct: 73 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 132
Query: 436 XXXAGLCGSVAA 471
+C ++AA
Sbjct: 133 QKRYAICSALAA 144
Score = 68.9 bits (161), Expect = 8e-12
Identities = 33/58 (56%), Positives = 43/58 (74%)
Frame = +2
Query: 77 SLSVARPLVSVYSEKSXTVQGAAKPLPFVFKAXIRPDLVNDVHVSMSKNSRQPYCVSK 250
+++ ARPL+SVYSEK + G LP VFKA IRPD+VN VH ++ KN+RQPY VS+
Sbjct: 14 AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 70
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 108 bits (260), Expect = 8e-24
Identities = 50/72 (69%), Positives = 53/72 (73%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGXRMFAPTKPXXXXXXXXXXX 435
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 436 XXXAGLCGSVAA 471
+C ++AA
Sbjct: 119 QKRYAICSALAA 130
Score = 68.5 bits (160), Expect = 1e-11
Identities = 33/57 (57%), Positives = 42/57 (73%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSXTVQGAAKPLPFVFKAXIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK + G LP VFKA IRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 106 bits (255), Expect = 3e-23
Identities = 49/72 (68%), Positives = 52/72 (72%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGXRMFAPTKPXXXXXXXXXXX 435
GHQT AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK
Sbjct: 59 GHQTRAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 436 XXXAGLCGSVAA 471
+C ++AA
Sbjct: 119 QKRYAICSALAA 130
Score = 70.5 bits (165), Expect = 3e-12
Identities = 34/57 (59%), Positives = 43/57 (75%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSXTVQGAAKPLPFVFKAXIRPDLVNDVHVSMSKNSRQPYCVSK 250
++VARPL+SVYSEK + G LP VFKA IRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVSE 56
>Z92544-3|CAM26349.1| 438|Homo sapiens rhomboid, veinlet-like 1
(Drosophila) protein.
Length = 438
Score = 31.1 bits (67), Expect = 2.0
Identities = 14/54 (25%), Positives = 22/54 (40%)
Frame = +1
Query: 241 REQGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGXRMFAPTKP 402
R + GG E W G + P ++ G ++G G C AP++P
Sbjct: 3 RVEDGGTTEELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQP 56
>Y17108-1|CAA76629.1| 438|Homo sapiens rhomboid-related protein
protein.
Length = 438
Score = 31.1 bits (67), Expect = 2.0
Identities = 14/54 (25%), Positives = 22/54 (40%)
Frame = +1
Query: 241 REQGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGXRMFAPTKP 402
R + GG E W G + P ++ G ++G G C AP++P
Sbjct: 3 RVEDGGTTEELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQP 56
>BC120875-1|AAI20876.1| 438|Homo sapiens rhomboid, veinlet-like 1
(Drosophila) protein.
Length = 438
Score = 31.1 bits (67), Expect = 2.0
Identities = 14/54 (25%), Positives = 22/54 (40%)
Frame = +1
Query: 241 REQGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGXRMFAPTKP 402
R + GG E W G + P ++ G ++G G C AP++P
Sbjct: 3 RVEDGGTTEELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQP 56
>BC120874-1|AAI20875.1| 438|Homo sapiens rhomboid, veinlet-like 1
(Drosophila) protein.
Length = 438
Score = 31.1 bits (67), Expect = 2.0
Identities = 14/54 (25%), Positives = 22/54 (40%)
Frame = +1
Query: 241 REQGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGXRMFAPTKP 402
R + GG E W G + P ++ G ++G G C AP++P
Sbjct: 3 RVEDGGTTEELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQP 56
>AE006464-9|AAK61241.1| 438|Homo sapiens rhomboid related protein
protein.
Length = 438
Score = 31.1 bits (67), Expect = 2.0
Identities = 14/54 (25%), Positives = 22/54 (40%)
Frame = +1
Query: 241 REQGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGXRMFAPTKP 402
R + GG E W G + P ++ G ++G G C AP++P
Sbjct: 3 RVEDGGTTEELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQP 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,123,975
Number of Sequences: 237096
Number of extensions: 1330400
Number of successful extensions: 6924
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 6680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6878
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4099895856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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