Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060718.seq
(472 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 107 1e-23
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 107 1e-23
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 107 1e-23
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 107 1e-23
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 104 5e-23
AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p pro... 31 1.0
AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-P... 31 1.0
AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-P... 31 1.0
AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p pro... 30 1.4
AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4 ... 30 1.4
AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear prot... 30 1.4
AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB ... 30 1.4
BT029095-1|ABJ17028.1| 554|Drosophila melanogaster IP13321p pro... 30 1.8
AE014298-745|AAF46035.1| 554|Drosophila melanogaster CG15784-PA... 30 1.8
BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p pro... 29 3.2
AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-P... 29 3.2
AY118719-1|AAM50579.1| 512|Drosophila melanogaster AT29177p pro... 28 7.3
AF050630-1|AAD09205.1| 884|Drosophila melanogaster Ahr homolog ... 28 7.3
AE014297-2199|AAF55308.1| 884|Drosophila melanogaster CG6993-PA... 28 7.3
AE014134-2219|AAF53202.2| 300|Drosophila melanogaster CG15489-P... 28 7.3
X05285-1|CAA28903.1| 147|Drosophila melanogaster fibrillarin pr... 27 9.7
BT001738-1|AAN71493.1| 331|Drosophila melanogaster RE72617p pro... 27 9.7
AY113441-1|AAM29446.1| 179|Drosophila melanogaster RE28679p pro... 27 9.7
AE014296-1188|AAF50617.2| 179|Drosophila melanogaster CG8638-PA... 27 9.7
AE013599-3536|AAF46950.1| 344|Drosophila melanogaster CG9888-PA... 27 9.7
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 107 bits (256), Expect = 1e-23
Identities = 47/48 (97%), Positives = 47/48 (97%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGXRMFAPTK 399
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK
Sbjct: 62 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 109
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/59 (55%), Positives = 42/59 (71%)
Frame = +2
Query: 74 MSLSVARPLVSVYSEKSXTVQGAAKPLPFVFKAXIRPDLVNDVHVSMSKNSRQPYCVSK 250
MSL ARPLVSVY+EK+ + LP VFKA IRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSE 59
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 107 bits (256), Expect = 1e-23
Identities = 47/48 (97%), Positives = 47/48 (97%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGXRMFAPTK 399
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK
Sbjct: 62 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 109
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/59 (55%), Positives = 42/59 (71%)
Frame = +2
Query: 74 MSLSVARPLVSVYSEKSXTVQGAAKPLPFVFKAXIRPDLVNDVHVSMSKNSRQPYCVSK 250
MSL ARPLVSVY+EK+ + LP VFKA IRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSE 59
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 107 bits (256), Expect = 1e-23
Identities = 47/48 (97%), Positives = 47/48 (97%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGXRMFAPTK 399
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK
Sbjct: 62 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 109
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/59 (55%), Positives = 42/59 (71%)
Frame = +2
Query: 74 MSLSVARPLVSVYSEKSXTVQGAAKPLPFVFKAXIRPDLVNDVHVSMSKNSRQPYCVSK 250
MSL ARPLVSVY+EK+ + LP VFKA IRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSE 59
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 107 bits (256), Expect = 1e-23
Identities = 47/48 (97%), Positives = 47/48 (97%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGXRMFAPTK 399
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK
Sbjct: 62 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 109
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/59 (55%), Positives = 42/59 (71%)
Frame = +2
Query: 74 MSLSVARPLVSVYSEKSXTVQGAAKPLPFVFKAXIRPDLVNDVHVSMSKNSRQPYCVSK 250
MSL ARPLVSVY+EK+ + LP VFKA IRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSE 59
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 104 bits (250), Expect = 5e-23
Identities = 46/47 (97%), Positives = 46/47 (97%)
Frame = +1
Query: 259 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGXRMFAPTK 399
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK
Sbjct: 1 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 47
>AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p
protein.
Length = 872
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 291 TCCRP-NSACPWWWYS*VRSGC 353
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-PB,
isoform B protein.
Length = 271
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 291 TCCRP-NSACPWWWYS*VRSGC 353
TCC P ++ CPW WY +GC
Sbjct: 117 TCCMPCSNQCPWSWYYNPCTGC 138
>AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-PA,
isoform A protein.
Length = 872
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 291 TCCRP-NSACPWWWYS*VRSGC 353
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p protein.
Length = 2176
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 247 QGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG 375
+GGG T ES GT + V ++ R GG SG G + G
Sbjct: 918 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHG 960
>AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4
protein.
Length = 2342
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 247 QGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG 375
+GGG T ES GT + V ++ R GG SG G + G
Sbjct: 1042 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHG 1084
>AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear protein
EAST protein.
Length = 2362
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 247 QGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG 375
+GGG T ES GT + V ++ R GG SG G + G
Sbjct: 1095 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHG 1137
>AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB
protein.
Length = 2301
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 247 QGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG 375
+GGG T ES GT + V ++ R GG SG G + G
Sbjct: 1042 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHG 1084
>BT029095-1|ABJ17028.1| 554|Drosophila melanogaster IP13321p
protein.
Length = 554
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Frame = -1
Query: 328 HHHG-HAEFGRQHVQYPMIQHW---FGDHLLAHA 239
HHHG H GR H +P H+ FG H HA
Sbjct: 207 HHHGRHGHHGRPHHHHPHGHHFGPHFGPHFGPHA 240
>AE014298-745|AAF46035.1| 554|Drosophila melanogaster CG15784-PA
protein.
Length = 554
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Frame = -1
Query: 328 HHHG-HAEFGRQHVQYPMIQHW---FGDHLLAHA 239
HHHG H GR H +P H+ FG H HA
Sbjct: 207 HHHGRHGHHGRPHHHHPHGHHFGPHFGPHFGPHA 240
>BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p
protein.
Length = 1953
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 79 SIGSPTFSVGVFREEXDGAGCSQAPPVRV 165
++GSP ++VG G G S APP V
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGV 315
>AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-PC
protein.
Length = 2528
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 79 SIGSPTFSVGVFREEXDGAGCSQAPPVRV 165
++GSP ++VG G G S APP V
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGV 315
>AY118719-1|AAM50579.1| 512|Drosophila melanogaster AT29177p
protein.
Length = 512
Score = 27.9 bits (59), Expect = 7.3
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -1
Query: 352 HPDRTYEYHHHGHAEFGRQH 293
HP + +HHH H E QH
Sbjct: 444 HPHSHHHHHHHHHHETAHQH 463
>AF050630-1|AAD09205.1| 884|Drosophila melanogaster Ahr homolog
spineless protein.
Length = 884
Score = 27.9 bits (59), Expect = 7.3
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -1
Query: 352 HPDRTYEYHHHGHAEFGRQH 293
HP + +HHH H E QH
Sbjct: 816 HPHSHHHHHHHHHHETAHQH 835
>AE014297-2199|AAF55308.1| 884|Drosophila melanogaster CG6993-PA
protein.
Length = 884
Score = 27.9 bits (59), Expect = 7.3
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -1
Query: 352 HPDRTYEYHHHGHAEFGRQH 293
HP + +HHH H E QH
Sbjct: 816 HPHSHHHHHHHHHHETAHQH 835
>AE014134-2219|AAF53202.2| 300|Drosophila melanogaster CG15489-PA
protein.
Length = 300
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = -1
Query: 379 VXHDTCXRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 269
V T HP ++ +HHH ++ + H Q QH
Sbjct: 90 VSASTLLYHHPHHSHRHHHHQQSQQQQLHQQQQQQQH 126
>X05285-1|CAA28903.1| 147|Drosophila melanogaster fibrillarin
protein.
Length = 147
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 250 GGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFG 360
GGG + G G R RGGG R G+G FG
Sbjct: 26 GGGFRGRGGGGGGGGGGFGGGRGRGGGGDRGGRGGFG 62
>BT001738-1|AAN71493.1| 331|Drosophila melanogaster RE72617p
protein.
Length = 331
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 250 GGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFG 360
GGG + G G R RGGG R G+G FG
Sbjct: 19 GGGFRGRGGGGGGGGGGFGGGRGRGGGGDRGGRGGFG 55
>AY113441-1|AAM29446.1| 179|Drosophila melanogaster RE28679p
protein.
Length = 179
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -1
Query: 358 RRHPDRTYEYHHHGHAEFGRQHVQ 287
R HP+ EY HH H +H Q
Sbjct: 118 RNHPEEDGEYEHHDHHHDHHEHHQ 141
>AE014296-1188|AAF50617.2| 179|Drosophila melanogaster CG8638-PA
protein.
Length = 179
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -1
Query: 358 RRHPDRTYEYHHHGHAEFGRQHVQ 287
R HP+ EY HH H +H Q
Sbjct: 118 RNHPEEDGEYEHHDHHHDHHEHHQ 141
>AE013599-3536|AAF46950.1| 344|Drosophila melanogaster CG9888-PA
protein.
Length = 344
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 250 GGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFG 360
GGG + G G R RGGG R G+G FG
Sbjct: 19 GGGFRGRGGGGGGGGGGFGGGRGRGGGGDRGGRGGFG 55
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,714,526
Number of Sequences: 53049
Number of extensions: 441212
Number of successful extensions: 2666
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2552
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1601407269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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