Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060717.seq
(641 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 61 2e-10
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 48 1e-06
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 46 6e-06
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 43 3e-05
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 43 4e-05
SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces pomb... 42 8e-05
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 42 8e-05
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 42 8e-05
SPAC1071.09c |||DNAJ domain protein, DNAJC9 family|Schizosacchar... 40 2e-04
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 40 2e-04
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 40 3e-04
SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces pom... 38 0.001
SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr 3... 36 0.005
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 36 0.007
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p... 35 0.009
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 35 0.011
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 34 0.015
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 34 0.020
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 34 0.020
SPAC926.05c |||diphthamide biosynthesis protein Dph4 |Schizosacc... 33 0.026
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 31 0.11
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc... 27 2.3
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 26 4.0
SPCC16C4.06c |||tRNA pseudouridylate synthase |Schizosaccharomyc... 25 7.0
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 60.9 bits (141), Expect = 2e-10
Identities = 21/57 (36%), Positives = 41/57 (71%)
Frame = +3
Query: 315 IVSGWVLLGFLAYKVSQFDYEMSNFDPYEILGLPPGATQAEIKKSYRKQSLVLHPDK 485
++ GW+ +GFL+YK++ +++ +DPYEILG+ G + ++++ Y++ S+ HPDK
Sbjct: 73 LILGWLAIGFLSYKIANSRLKLNIWDPYEILGIAKGTSVDDVRRHYKRLSIKFHPDK 129
Score = 40.3 bits (90), Expect = 2e-04
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 506 FMRLTKAYQALTDDEARRNWEXYGNPDGP 592
++ +T AY+ALTDD+ R N+ YG PD P
Sbjct: 145 YIEITNAYRALTDDKTRENYALYGTPDVP 173
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 48.0 bits (109), Expect = 1e-06
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +3
Query: 390 DPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEKA 506
D Y+ILG+ AT EIKK+YRK +LV HPDK G+ +A
Sbjct: 349 DHYKILGVSKEATDIEIKKAYRKLALVYHPDKNAGNLEA 387
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 45.6 bits (103), Expect = 6e-06
Identities = 20/44 (45%), Positives = 29/44 (65%)
Frame = +3
Query: 375 EMSNFDPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEKA 506
E +++ Y LGLP AT +IK+SY + S + HPD+ T D+KA
Sbjct: 3 EADSWELYLALGLPKDATSDQIKESYYRLSRLFHPDRHTADQKA 46
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 43.2 bits (97), Expect = 3e-05
Identities = 18/42 (42%), Positives = 30/42 (71%)
Frame = +3
Query: 381 SNFDPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEKA 506
+NF +ILG+ A+++EI+K+YR+ + HPDK G+E+A
Sbjct: 4 NNFSQKQILGVSKDASESEIRKAYRQLTKQWHPDKNPGNEEA 45
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 42.7 bits (96), Expect = 4e-05
Identities = 20/44 (45%), Positives = 26/44 (59%)
Frame = +3
Query: 375 EMSNFDPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEKA 506
E + D YE+LG+ A EI +++RK SL HPDK D KA
Sbjct: 4 EGDSIDYYELLGINEDAQDQEIHRAWRKTSLKYHPDKNPNDPKA 47
>SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 209
Score = 41.9 bits (94), Expect = 8e-05
Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Frame = +3
Query: 363 QFDYEMSNF--DPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEKA 506
+ D +S+F + Y++L + PG + +I+ YRK+SL++HPDK + KA
Sbjct: 20 EIDRILSSFKLNAYDVLDILPGMSVDDIRNLYRKKSLMIHPDKNRDNPKA 69
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 41.9 bits (94), Expect = 8e-05
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +3
Query: 396 YEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEK 503
Y+ L + P A++AE+KK+YRK +L HPDK EK
Sbjct: 8 YDCLEVRPEASEAELKKAYRKLALKYHPDKNPNGEK 43
Score = 25.8 bits (54), Expect = 5.3
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = +2
Query: 506 FMRLTKAYQALTDDEARRNWEXYGNPDG 589
F ++ AY+ L+D + R+ ++ YG +G
Sbjct: 45 FKEISLAYEVLSDPQRRKLYDQYGITEG 72
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 41.9 bits (94), Expect = 8e-05
Identities = 20/34 (58%), Positives = 22/34 (64%)
Frame = +3
Query: 384 NFDPYEILGLPPGATQAEIKKSYRKQSLVLHPDK 485
N YEIL L T EIKKSY+K +L LHPDK
Sbjct: 111 NHQYYEILDLKKTCTDTEIKKSYKKLALQLHPDK 144
>SPAC1071.09c |||DNAJ domain protein, DNAJC9
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 40.3 bits (90), Expect = 2e-04
Identities = 16/46 (34%), Positives = 29/46 (63%)
Frame = +3
Query: 366 FDYEMSNFDPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEK 503
+ + + DPY +LG+ A+ I+++YRK++L HPD+ +EK
Sbjct: 23 YSFIKMDIDPYSVLGVEKDASDELIRRAYRKKALQHHPDRIHDEEK 68
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 40.3 bits (90), Expect = 2e-04
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +3
Query: 396 YEILGLPPGATQAEIKKSYRKQSLVLHPDK 485
YE+L + A+QAE+KK+YRK +L HPDK
Sbjct: 8 YEVLNVDVTASQAELKKAYRKLALKYHPDK 37
Score = 25.8 bits (54), Expect = 5.3
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +2
Query: 506 FMRLTKAYQALTDDEARRNWEXYG 577
F +++AY+ L D+E R ++ +G
Sbjct: 45 FKEISRAYEILADEEKRATYDRFG 68
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 39.9 bits (89), Expect = 3e-04
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 396 YEILGLPPGATQAEIKKSYRKQSLVLHPDKETGD 497
Y++LG+ AT +IKK+YRK ++ HPDK D
Sbjct: 10 YDLLGISTDATAVDIKKAYRKLAVKYHPDKNPDD 43
>SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 303
Score = 37.9 bits (84), Expect = 0.001
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +3
Query: 396 YEILGLPPGATQAEIKKSYRKQSLVLHPDK 485
YE+L +P A+ EI ++YRK+S++ HPDK
Sbjct: 42 YELLEVPTKASIKEINRAYRKKSILYHPDK 71
>SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 208
Score = 35.9 bits (79), Expect = 0.005
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 390 DPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEKA 506
D Y IL + P A+ EIK +Y+K +L HPD+ + +A
Sbjct: 4 DYYAILNITPKASAEEIKYAYKKAALETHPDRVSPSARA 42
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 35.5 bits (78), Expect = 0.007
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +3
Query: 381 SNFDPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEK 503
++ D Y IL L AT +I+K Y +L HPD+ GDE+
Sbjct: 9 TSVDYYAILKLQKNATFQQIRKQYLFLALQYHPDRNPGDEE 49
>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 35.1 bits (77), Expect = 0.009
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 390 DPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEKA 506
D Y+IL + A IKKSYR+ +++ HPDK + +A
Sbjct: 9 DYYDILNISVDADGDTIKKSYRRLAILYHPDKNRENPEA 47
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 34.7 bits (76), Expect = 0.011
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +3
Query: 384 NFDPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDE 500
+ D YEIL + + EIK +YRK +L HPD+ G E
Sbjct: 7 DMDCYEILQVNHDSDLQEIKANYRKLALQYHPDRNPGIE 45
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 34.3 bits (75), Expect = 0.015
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 396 YEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEK 503
Y+IL + A+ EIKKSY++ +L+ HPDK EK
Sbjct: 8 YDILEVHFEASAEEIKKSYKRLALLHHPDKAPIHEK 43
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 33.9 bits (74), Expect = 0.020
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 390 DPYEILGLPPGATQAEIKKSYRKQSLVLHPD 482
DPY+ LG+ A+ +EIK +Y K + HPD
Sbjct: 86 DPYKTLGVSKSASASEIKSAYYKLAKQYHPD 116
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 33.9 bits (74), Expect = 0.020
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 375 EMSNFDPYEILGLPPGATQAEIKKSYRKQSLVLHPDK 485
E+ + PYEIL LP T +IK+ Y + HPDK
Sbjct: 27 ELKSLTPYEILELPRTCTANDIKRKYIELVKKHHPDK 63
>SPAC926.05c |||diphthamide biosynthesis protein Dph4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 139
Score = 33.5 bits (73), Expect = 0.026
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +3
Query: 396 YEILGLPPGATQA--EIKKSYRKQSLVLHPDK 485
Y +L L G T EIK++YRK L+ HPDK
Sbjct: 4 YSVLNLKDGKTYTDDEIKEAYRKALLLFHPDK 35
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 31.5 bits (68), Expect = 0.11
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 390 DPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDE 500
D Y ILG ++ EI++ Y K L HPD+ G E
Sbjct: 12 DYYTILGAESTSSYVEIRQQYLKLVLRYHPDRNPGRE 48
>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 442
Score = 27.1 bits (57), Expect = 2.3
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +3
Query: 375 EMSNFDPYEILGLPPGATQAE---IKKSYRKQSLVLHPDKE 488
E D Y +LGL +A+ IKK++ K+ L HPDK+
Sbjct: 92 EWKQQDHYAVLGLSKYRYKADTEQIKKAHLKKVLKHHPDKK 132
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 26.2 bits (55), Expect = 4.0
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +1
Query: 112 GSTFFYFVLSFLALILVP 165
G+ FF +++FLALI++P
Sbjct: 1836 GTMFFLLLIAFLALIIIP 1853
>SPCC16C4.06c |||tRNA pseudouridylate synthase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 413
Score = 25.4 bits (53), Expect = 7.0
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -2
Query: 556 SRFIICKSLVCLCEPHKAFSSPVSL 482
SRF +S++CL + H+ F S +S+
Sbjct: 8 SRFSANQSVLCLLQRHRVFFSSISV 32
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,665,365
Number of Sequences: 5004
Number of extensions: 54231
Number of successful extensions: 163
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 287744314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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