Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060717.seq
(641 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032652-6|CAA21710.2| 752|Caenorhabditis elegans Hypothetical ... 58 4e-09
AL032652-5|CAB63399.1| 579|Caenorhabditis elegans Hypothetical ... 58 4e-09
Z66513-5|CAA91334.1| 331|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z36238-2|CAA85274.1| 378|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U00058-4|AAD31932.3| 249|Caenorhabditis elegans Dnaj domain (pr... 43 2e-04
Z47356-7|CAD31695.1| 249|Caenorhabditis elegans Hypothetical pr... 41 7e-04
U80438-2|AAB37632.1| 112|Caenorhabditis elegans Dnaj domain (pr... 41 7e-04
AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain (... 41 7e-04
U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain (pr... 41 9e-04
U40415-10|AAK39254.1| 215|Caenorhabditis elegans Dnaj domain (p... 40 0.002
AC024201-3|AAK93866.1| 238|Caenorhabditis elegans Dnaj domain (... 38 0.006
Z73102-15|CAA97416.1| 401|Caenorhabditis elegans Hypothetical p... 38 0.008
U80439-4|AAB37641.2| 274|Caenorhabditis elegans Dnaj domain (pr... 37 0.014
AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical... 36 0.019
U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain (p... 36 0.025
U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain (pr... 36 0.033
Z35663-8|CAA84728.1| 249|Caenorhabditis elegans Hypothetical pr... 35 0.043
AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain (... 35 0.043
Z81030-9|CAB02713.1| 191|Caenorhabditis elegans Hypothetical pr... 35 0.057
Z82075-3|CAB04929.2| 784|Caenorhabditis elegans Hypothetical pr... 34 0.075
Z54216-2|CAA90945.1| 242|Caenorhabditis elegans Hypothetical pr... 34 0.075
AF293972-1|AAG02478.1| 784|Caenorhabditis elegans auxilin protein. 34 0.075
AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain (... 34 0.099
Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical pr... 33 0.13
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 33 0.23
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 33 0.23
Z79603-11|CAI79234.1| 75|Caenorhabditis elegans Hypothetical p... 31 0.93
U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain (pr... 31 0.93
U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain (pr... 30 1.2
U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain (pr... 30 1.2
U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain (pr... 30 1.2
U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain (pr... 30 1.2
Z73102-3|CAA97409.1| 337|Caenorhabditis elegans Hypothetical pr... 29 2.8
AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical ... 29 3.7
>AL032652-6|CAA21710.2| 752|Caenorhabditis elegans Hypothetical
protein Y63D3A.6b protein.
Length = 752
Score = 58.4 bits (135), Expect = 4e-09
Identities = 22/72 (30%), Positives = 41/72 (56%)
Frame = +3
Query: 270 SQPYKSVKNFFVKLAIVSGWVLLGFLAYKVSQFDYEMSNFDPYEILGLPPGATQAEIKKS 449
++P++ K + +V W + + K ++ + ++DPY+ILGL GA + IKK+
Sbjct: 67 NKPWRRTKKIITIVVLVVAWAIFAIIVKKTTEIEQTHKDYDPYQILGLDQGADEKAIKKA 126
Query: 450 YRKQSLVLHPDK 485
+R S + HPD+
Sbjct: 127 WRDMSKIHHPDR 138
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +1
Query: 79 MGGQKFEYDESGSTFFYFVLSFLALILVPATFYYWPKKRKEDPAKL--AERCQCPNCVSK 252
MG FEYDE G+TF+Y +++F A+IL PAT+ P K +P + CQC C K
Sbjct: 1 MGRASFEYDEVGNTFYYVLVAFYAIILFPATYLCLPGASKPEPEHVINEHECQCDGCDKK 60
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +2
Query: 506 FMRLTKAYQALTDDEARRNWEXYGNPDGP 592
F ++ KA+QALTD EAR NWE YGNPDGP
Sbjct: 145 FDKIAKAHQALTDKEARENWEKYGNPDGP 173
>AL032652-5|CAB63399.1| 579|Caenorhabditis elegans Hypothetical
protein Y63D3A.6a protein.
Length = 579
Score = 58.4 bits (135), Expect = 4e-09
Identities = 22/72 (30%), Positives = 41/72 (56%)
Frame = +3
Query: 270 SQPYKSVKNFFVKLAIVSGWVLLGFLAYKVSQFDYEMSNFDPYEILGLPPGATQAEIKKS 449
++P++ K + +V W + + K ++ + ++DPY+ILGL GA + IKK+
Sbjct: 67 NKPWRRTKKIITIVVLVVAWAIFAIIVKKTTEIEQTHKDYDPYQILGLDQGADEKAIKKA 126
Query: 450 YRKQSLVLHPDK 485
+R S + HPD+
Sbjct: 127 WRDMSKIHHPDR 138
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +1
Query: 79 MGGQKFEYDESGSTFFYFVLSFLALILVPATFYYWPKKRKEDPAKL--AERCQCPNCVSK 252
MG FEYDE G+TF+Y +++F A+IL PAT+ P K +P + CQC C K
Sbjct: 1 MGRASFEYDEVGNTFYYVLVAFYAIILFPATYLCLPGASKPEPEHVINEHECQCDGCDKK 60
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +2
Query: 506 FMRLTKAYQALTDDEARRNWEXYGNPDGP 592
F ++ KA+QALTD EAR NWE YGNPDGP
Sbjct: 145 FDKIAKAHQALTDKEARENWEKYGNPDGP 173
>Z66513-5|CAA91334.1| 331|Caenorhabditis elegans Hypothetical
protein F54D5.8 protein.
Length = 331
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Frame = +3
Query: 390 DPYEILGLPPGATQAEIKKSYRKQSLVLHPD--KETGDE 500
D Y++LG+ GAT EIKK+YRK +L HPD KE G E
Sbjct: 4 DYYKVLGISKGATDDEIKKAYRKMALKYHPDKNKEAGAE 42
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 44.0 bits (99), Expect = 9e-05
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +3
Query: 396 YEILGLPPGATQAEIKKSYRKQSLVLHPDKE-TGDEKAL*GSQRHTRLLQMMKRDV 560
Y++LG+ P A+ E+KK+YRK +L HPDK G E+ SQ + L KR +
Sbjct: 8 YDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKKRQI 63
>Z36238-2|CAA85274.1| 378|Caenorhabditis elegans Hypothetical
protein R74.4 protein.
Length = 378
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +3
Query: 375 EMSNFDPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEKA 506
++S D Y++LG+ A++AEIK +YRK +L HPD+ D A
Sbjct: 12 KVSEMDFYQLLGVEKMASEAEIKSAYRKLALKYHPDRNPNDAHA 55
>U00058-4|AAD31932.3| 249|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 24 protein.
Length = 249
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +3
Query: 393 PYEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEKAL*GSQRHTRLLQ 542
PY LG+ + EIKK+YRK +L HPDK T D+ Q+ ++ Q
Sbjct: 8 PYITLGISSTSDDVEIKKAYRKLALKWHPDKHTDDKSKEEAEQKFKKIAQ 57
>Z47356-7|CAD31695.1| 249|Caenorhabditis elegans Hypothetical
protein T15H9.7 protein.
Length = 249
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 390 DPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEKA 506
D Y+ILG+ A +IKK+YRK + LHPD+ DE A
Sbjct: 24 DFYKILGVAKNANANQIKKAYRKLAKELHPDRNQDDEMA 62
>U80438-2|AAB37632.1| 112|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 21 protein.
Length = 112
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/48 (39%), Positives = 30/48 (62%)
Frame = +3
Query: 342 FLAYKVSQFDYEMSNFDPYEILGLPPGATQAEIKKSYRKQSLVLHPDK 485
F Y FD +MS + +ILG+ P A A+IK++++K +V HPD+
Sbjct: 43 FSNYYRGGFDQKMSRAEAAKILGVAPSAKPAKIKEAHKKVMIVNHPDR 90
>AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 22 protein.
Length = 296
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +3
Query: 390 DPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEK 503
+PY+IL L G T EI+K+YR Q L HPDK +++
Sbjct: 8 NPYKILHLEKGCTDKEIQKAYRAQCLKWHPDKNLDNKE 45
>U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 9 protein.
Length = 591
Score = 40.7 bits (91), Expect = 9e-04
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 375 EMSNFDPYEILGLPPGATQAEIKKSYRKQSLVLHPDK-ETGDEK 503
E D Y IL +P AT EI K+YRK+ L+ HPD+ DEK
Sbjct: 21 EEEEIDFYAILNVPKDATDDEIIKAYRKRCLMFHPDRFVDNDEK 64
>U40415-10|AAK39254.1| 215|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 14 protein.
Length = 215
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +3
Query: 396 YEILGLPPGATQAEIKKSYRKQSLVLHPDK 485
Y +LG+ AT EIKK+YRK +L HPDK
Sbjct: 40 YNVLGIQKNATDDEIKKAYRKLALRYHPDK 69
>AC024201-3|AAK93866.1| 238|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 30 protein.
Length = 238
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 384 NFDPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEK 503
N +PYE+L + KK Y+K SL++HPDK D +
Sbjct: 39 NLNPYEVLQIDLDTDIEAAKKKYKKLSLLVHPDKNPDDRE 78
>Z73102-15|CAA97416.1| 401|Caenorhabditis elegans Hypothetical
protein B0035.14 protein.
Length = 401
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +3
Query: 390 DPYEILGLPPGATQAEIKKSYRKQSLVLHPDK 485
D YEIL + A+ +I+K YRK +L LHPDK
Sbjct: 137 DYYEILKIDKKASDDDIRKEYRKLALKLHPDK 168
>U80439-4|AAB37641.2| 274|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 4 protein.
Length = 274
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 327 WVLLGFLAYKVSQFDYEMSNFDPYEILGLPPGATQAEIKKSYRKQSLVLHPDKET 491
W GF + F+ ++ YE+LG+ AT +EIK ++ QS +HPD +
Sbjct: 7 WSPHGFWVCQARFFNKKIRQRTHYEVLGVESTATLSEIKSAFYAQSKKVHPDNSS 61
>AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical
protein Y47H9C.5a protein.
Length = 788
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 390 DPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEKA 506
D YE+LG+ A I+K+++K ++ HPD+ T D A
Sbjct: 20 DYYELLGVERDADDRTIRKAFKKLAIKKHPDRNTDDPNA 58
>U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 8 protein.
Length = 813
Score = 35.9 bits (79), Expect = 0.025
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +3
Query: 390 DPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEKA 506
DPY++LG+ A+ EIK +Y+ + HPDK DE A
Sbjct: 22 DPYKVLGISRRASAKEIKSAYKSLAREWHPDKRK-DEAA 59
>U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 7 protein.
Length = 491
Score = 35.5 bits (78), Expect = 0.033
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +3
Query: 390 DPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEK 503
D Y+ILG+ A++ EI K+YRK + HPD + +E+
Sbjct: 379 DYYKILGVKRNASKREITKAYRKLAQKWHPDNFSDEEE 416
>Z35663-8|CAA84728.1| 249|Caenorhabditis elegans Hypothetical
protein T04A8.9 protein.
Length = 249
Score = 35.1 bits (77), Expect = 0.043
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 381 SNFDPYEILGLPPGATQAEIKKSYRKQSLVLHPD-KETGDEKA 506
S D Y++LGL A+Q +IK +Y K S HPD T E+A
Sbjct: 21 SQQDHYKVLGLAQSASQKDIKSAYYKLSKQHHPDTNPTNKEEA 63
>AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 19 protein.
Length = 439
Score = 35.1 bits (77), Expect = 0.043
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +3
Query: 396 YEILGLPPGATQAEIKKSYRKQSLVLHPDK 485
Y L + P A+QA+IKKSY K + HPDK
Sbjct: 15 YTTLNVRPDASQADIKKSYFKLAKEYHPDK 44
>Z81030-9|CAB02713.1| 191|Caenorhabditis elegans Hypothetical
protein C01G10.12 protein.
Length = 191
Score = 34.7 bits (76), Expect = 0.057
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 396 YEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEKA 506
YEI+G+ AT+ EI+ ++ K++ LHPD+ K+
Sbjct: 20 YEIIGVSASATRQEIRDAFLKKTKQLHPDQSRKSSKS 56
>Z82075-3|CAB04929.2| 784|Caenorhabditis elegans Hypothetical
protein W07A8.3 protein.
Length = 784
Score = 34.3 bits (75), Expect = 0.075
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +3
Query: 426 TQAEIKKSYRKQSLVLHPDKETG 494
T +IKK YRK LV+HPDK TG
Sbjct: 734 TPDQIKKHYRKACLVVHPDKLTG 756
>Z54216-2|CAA90945.1| 242|Caenorhabditis elegans Hypothetical
protein T24H10.3 protein.
Length = 242
Score = 34.3 bits (75), Expect = 0.075
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +3
Query: 396 YEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEKAL*GSQRHTRLLQMMKR 554
YE+LG+ + +KK Y +QS+ HPDK E+ + Q +T Q++ +
Sbjct: 16 YELLGVKKDCDEKALKKGYYRQSMRWHPDKSNLVEEDM---QTYTTKFQLLNK 65
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 506 FMRLTKAYQALTDDEARRNWEXYGNPD 586
F L KAYQ L+D+E R+ ++ G+ D
Sbjct: 60 FQLLNKAYQILSDEEKRKIYDETGSVD 86
>AF293972-1|AAG02478.1| 784|Caenorhabditis elegans auxilin protein.
Length = 784
Score = 34.3 bits (75), Expect = 0.075
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +3
Query: 426 TQAEIKKSYRKQSLVLHPDKETG 494
T +IKK YRK LV+HPDK TG
Sbjct: 734 TPDQIKKHYRKACLVVHPDKLTG 756
>AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 28 protein.
Length = 494
Score = 33.9 bits (74), Expect = 0.099
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +3
Query: 390 DPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETGDEK 503
D Y+ILG+ A + EI K+YRK + HPD DEK
Sbjct: 380 DYYKILGVRRNANKREITKAYRKMAQKWHPD-NFQDEK 416
>Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical
protein T03F6.2 protein.
Length = 510
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 396 YEILGLPPGATQAEIKKSYRKQSLVLHPDK 485
YE+L + A +IKK+YRK +L HPDK
Sbjct: 30 YEVLEVERDADDDKIKKNYRKLALKWHPDK 59
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 32.7 bits (71), Expect = 0.23
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2
Query: 506 FMRLTKAYQALTDDEARRNWEXYGNPDGP 592
F +++AY+ L+DD R+ ++ YG+ GP
Sbjct: 85 FQEISEAYEVLSDDTKRQEYDAYGSGGGP 113
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 32.7 bits (71), Expect = 0.23
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2
Query: 506 FMRLTKAYQALTDDEARRNWEXYGNPDGP 592
F +++AY+ L+DD R+ ++ YG+ GP
Sbjct: 85 FQEISEAYEVLSDDTKRQEYDAYGSGGGP 113
>Z79603-11|CAI79234.1| 75|Caenorhabditis elegans Hypothetical
protein M163.9 protein.
Length = 75
Score = 30.7 bits (66), Expect = 0.93
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 69 DTYNGRSKIRI*RKWIYILLFCFIISCINISTSYILLLA*KTKR 200
D+++ ++ RKW Y +L C+ I+ + T +IL K+ R
Sbjct: 22 DSFHTLQTEKVARKWAYSILICYTIAAVAFMTIFILWFFKKSGR 65
>U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 11 protein.
Length = 589
Score = 30.7 bits (66), Expect = 0.93
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = +3
Query: 375 EMSNFDPYEILGLPP---GATQAEIKKSYRKQSLVLHPDKE 488
+ N D Y++LGL AT EI+ YR++ L HPDK+
Sbjct: 93 DCKNQDHYKVLGLSKLRWQATSDEIRFCYRQKVLKHHPDKK 133
>U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform b
protein.
Length = 849
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 390 DPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETGD 497
D Y + GL + +IK++Y++ + ++ PDK T D
Sbjct: 660 DAYSVFGLRSDCSDDDIKRNYKRLAALVSPDKCTID 695
>U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform d
protein.
Length = 868
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 390 DPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETGD 497
D Y + GL + +IK++Y++ + ++ PDK T D
Sbjct: 660 DAYSVFGLRSDCSDDDIKRNYKRLAALVSPDKCTID 695
>U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform a
protein.
Length = 915
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 390 DPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETGD 497
D Y + GL + +IK++Y++ + ++ PDK T D
Sbjct: 660 DAYSVFGLRSDCSDDDIKRNYKRLAALVSPDKCTID 695
>U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform c
protein.
Length = 912
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 390 DPYEILGLPPGATQAEIKKSYRKQSLVLHPDKETGD 497
D Y + GL + +IK++Y++ + ++ PDK T D
Sbjct: 659 DAYSVFGLRSDCSDDDIKRNYKRLAALVSPDKCTID 694
>Z73102-3|CAA97409.1| 337|Caenorhabditis elegans Hypothetical
protein B0035.2 protein.
Length = 337
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 500 EGFMRLTKAYQALTDDEARRNWEXY-GNPD 586
E F + AY+ L DDEA+ N++ Y +PD
Sbjct: 80 ERFRVIATAYETLKDDEAKTNYDYYLDHPD 109
>AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical
protein Y39C12A.8 protein.
Length = 365
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 390 DPYEILGLPPGATQAEIKKSYRKQSLVLHPDK 485
D Y+IL + A+ EI+ ++RK+ +HPDK
Sbjct: 27 DFYKILNVDKKASPDEIRIAFRKRIREVHPDK 58
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,663,700
Number of Sequences: 27780
Number of extensions: 303542
Number of successful extensions: 824
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -