Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060716.seq
(636 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0579 + 34870958-34874578 37 0.015
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 36 0.036
12_01_0610 + 5030130-5030247,5030957-5033193 35 0.047
05_01_0372 - 2913518-2916562,2916674-2917528 35 0.062
10_08_0842 - 20954712-20957738 34 0.11
10_08_0165 + 15356748-15356811,15357113-15357186,15357311-153573... 33 0.19
04_03_1046 + 21974577-21975126,21975620-21975894,21976120-219762... 33 0.19
03_01_0365 - 2839190-2839251,2839637-2839694,2839946-2840032,284... 31 0.77
01_05_0340 - 21139885-21139978,21140169-21140272,21140379-211405... 31 0.77
06_01_0102 + 834660-834911,835460-835568,835891-836006,836116-83... 31 1.0
03_06_0407 - 33714563-33714636,33714966-33715152,33715943-337160... 31 1.0
03_05_0990 - 29503950-29504462,29504567-29504686,29514956-295150... 31 1.0
05_04_0176 + 18749945-18749969,18750186-18750751,18750876-187509... 30 1.3
05_02_0030 + 5826065-5826092,5826307-5828309,5828412-5828732,582... 30 1.3
03_01_0326 + 2535800-2535938,2536891-2536959,2537310-2537375,253... 30 1.3
11_02_0010 + 7322826-7323658,7324236-7324714,7325204-7326195 30 1.8
10_08_0250 - 16179646-16179759,16180197-16180325,16180519-161806... 30 1.8
06_03_0473 + 21190878-21191188,21191269-21192355,21192972-211931... 30 1.8
02_05_0161 + 26384079-26384086,26386173-26386226,26386376-263864... 30 1.8
01_01_0565 - 4159946-4160042,4160140-4160243,4160378-4160533,416... 30 1.8
12_02_0722 - 22521909-22521932,22522291-22522419,22522976-225242... 29 3.1
12_02_0534 - 20103908-20105897,20106314-20107116 29 3.1
07_01_0926 - 7775536-7775616,7775695-7775787,7775903-7775965,777... 29 3.1
03_06_0267 - 32751431-32751489,32751600-32751645,32751886-327519... 29 3.1
03_02_0267 + 6990674-6990890,6991692-6991761,6991824-6991913,699... 29 3.1
01_06_1343 - 36461476-36461961,36463355-36463519 29 3.1
11_06_0197 + 21149453-21149630,21149930-21149996,21150142-211502... 29 4.1
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 29 4.1
07_01_0307 - 2194796-2199274 29 4.1
03_06_0475 + 34193951-34194023,34195414-34195486,34195572-341956... 29 4.1
10_01_0198 - 2158139-2158334,2158517-2158641,2158736-2158789,215... 28 5.4
08_02_1311 - 26039741-26039930,26040185-26040316,26040528-260406... 28 5.4
04_04_1183 - 31537196-31537290,31537665-31537986,31538176-315382... 28 5.4
12_01_0840 - 7847239-7847531,7847576-7847675,7848312-7848388,784... 28 7.1
11_06_0278 - 21854859-21855101,21855529-21855587,21855684-218557... 28 7.1
07_03_0203 + 15138864-15140452,15140629-15140726,15141924-151422... 28 7.1
04_01_0568 - 7279478-7279590,7279749-7279988,7280078-7280141,728... 28 7.1
11_04_0305 - 16162063-16162096,16162282-16164365,16165283-161653... 27 9.4
09_04_0527 - 18337968-18338077,18338440-18341212 27 9.4
08_02_0059 - 11778739-11780998,11781744-11781751 27 9.4
06_01_0169 - 1346281-1349188,1350069-1350184 27 9.4
05_07_0003 + 26981956-26982190,26982258-26982318,26982739-269828... 27 9.4
05_04_0033 - 17369134-17369321,17369522-17370355,17370429-17373042 27 9.4
04_03_0687 + 18713603-18713962,18715318-18715539,18717068-187172... 27 9.4
01_06_1699 - 39269477-39269574,39269690-39269929,39270029-392700... 27 9.4
>03_06_0579 + 34870958-34874578
Length = 1206
Score = 36.7 bits (81), Expect = 0.015
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Frame = +3
Query: 243 FRVHLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGV-- 416
F +++V+G++G+GKS +NS+F +K+ + L A+T E GV
Sbjct: 583 FSCNVLVLGKTGVGKSATINSIF------------GEDKSKTSAFLPATTAVKEISGVVG 630
Query: 417 KLRLTVVDTPGYG----DAIDNTDCFRSIIQYI 503
++ VVDTPG G D N S+ +YI
Sbjct: 631 GVKFRVVDTPGLGTTHMDEKSNRKVLNSVKKYI 663
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 35.5 bits (78), Expect = 0.036
Identities = 24/92 (26%), Positives = 51/92 (55%)
Frame = +3
Query: 243 FRVHLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKL 422
F +++V+G+ G+GKST++NS+ + E+ +A + V+L +S V+ G+K
Sbjct: 4912 FSCNILVLGKIGVGKSTVINSI----MGEEKNKINAFDGATTNVRLVSSVVD----GIK- 4962
Query: 423 RLTVVDTPGYGDAIDNTDCFRSIIQYIDDSSK 518
+ ++DTPG + + + I+ ++ +K
Sbjct: 4963 -VNIIDTPGLRTNVMDQGWNKKILSTVNSYTK 4993
>12_01_0610 + 5030130-5030247,5030957-5033193
Length = 784
Score = 35.1 bits (77), Expect = 0.047
Identities = 20/67 (29%), Positives = 39/67 (58%)
Frame = +3
Query: 249 VHLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLRL 428
+ ++++G++G+GKS +NS+F + ATE+ ++D + +G+ R+
Sbjct: 160 LRILLLGKTGVGKSATINSIFDEPKVATNALAPATERIR---RIDGTI-----KGI--RV 209
Query: 429 TVVDTPG 449
TV+DTPG
Sbjct: 210 TVIDTPG 216
>05_01_0372 - 2913518-2916562,2916674-2917528
Length = 1299
Score = 34.7 bits (76), Expect = 0.062
Identities = 25/92 (27%), Positives = 46/92 (50%)
Frame = +3
Query: 243 FRVHLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKL 422
F +++V+G+ G+GKS +NS+F E+ DA +V+ V+ GV++
Sbjct: 660 FSCNILVLGKIGVGKSATINSIF----GEEKSKTDAFSSATNSVREIVGNVD----GVQI 711
Query: 423 RLTVVDTPGYGDAIDNTDCFRSIIQYIDDSSK 518
R ++DTPG + + R I+ + +K
Sbjct: 712 R--IIDTPGLRPNVMDQGSNRKILASVKKYTK 741
>10_08_0842 - 20954712-20957738
Length = 1008
Score = 33.9 bits (74), Expect = 0.11
Identities = 23/69 (33%), Positives = 42/69 (60%)
Frame = +3
Query: 243 FRVHLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKL 422
F ++V+G++G+GKS +NS+F D+ R+ +A + + + V+ VE G+K+
Sbjct: 382 FSCTILVLGKTGVGKSATINSIF-DDV---RLETNAFDTSTRKVQEVVGAVE----GIKV 433
Query: 423 RLTVVDTPG 449
+ V+DTPG
Sbjct: 434 K--VIDTPG 440
>10_08_0165 +
15356748-15356811,15357113-15357186,15357311-15357394,
15357508-15357602,15357737-15357790,15357791-15357896,
15358236-15358277,15358585-15358674,15358788-15358984,
15359355-15359413,15360166-15362252
Length = 983
Score = 33.1 bits (72), Expect = 0.19
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 237 KGFRVHLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKL-DASTVEIE 404
K RV L+++G+SG+GKS +V P + +QT+ L D++TV+ E
Sbjct: 41 KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTTVKFE 97
>04_03_1046 +
21974577-21975126,21975620-21975894,21976120-21976284,
21976352-21976441,21977723-21978097
Length = 484
Score = 33.1 bits (72), Expect = 0.19
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Frame = +3
Query: 249 VHLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLR- 425
V L++VG+ G GKS NS+ + + + + QT + ++TV + G +R
Sbjct: 123 VTLVLVGKVGSGKSATANSILGDEAFESKC---SYAGVTQTCQKKSTTV---QDGCLIRT 176
Query: 426 LTVVDTPGYGDA-IDNTDCFRSIIQYID 506
+ V+DTPG D I D R I++ +D
Sbjct: 177 INVIDTPGLFDMDIKAEDVRREIVKCMD 204
>03_01_0365 -
2839190-2839251,2839637-2839694,2839946-2840032,
2840117-2840206,2840575-2840650,2840877-2840971,
2841090-2841173,2841270-2841343,2841803-2841827
Length = 216
Score = 31.1 bits (67), Expect = 0.77
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +3
Query: 237 KGFRVHLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTV 395
K R L+++G+SG+GKS +V P + +QT+ L+ ST+
Sbjct: 28 KDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTI 80
>01_05_0340 -
21139885-21139978,21140169-21140272,21140379-21140534,
21140622-21140693,21140782-21140829,21140923-21140970,
21141807-21141879,21142333-21142346
Length = 202
Score = 31.1 bits (67), Expect = 0.77
Identities = 21/65 (32%), Positives = 34/65 (52%)
Frame = +3
Query: 255 LMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLRLTV 434
L+++G+SG+GKS L+ F D Y E I T+ +D +E+ G ++L +
Sbjct: 11 LLLIGDSGVGKSCLL-LRFADDSYLESYI--------STIGVDFKIRTVEQDGKTIKLQI 61
Query: 435 VDTPG 449
DT G
Sbjct: 62 WDTAG 66
>06_01_0102 +
834660-834911,835460-835568,835891-836006,836116-836235,
836398-836436,836678-836811,837035-837299,837615-837698,
837943-838003,838748-838810,839174-839216,839632-839711,
839831-840267
Length = 600
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 261 VVGESGLGKSTLVNSLFLTD-LYPERVIPDATEKTNQTVKLDASTVEIEERGVKLRLTVV 437
V+G +G+GKST++N L+ D P + P AT+ T I+ R R+ ++
Sbjct: 97 VIGPTGVGKSTIMNELYGYDGSSPGMLPPFATQTEEIKAMAKHCTAGIDIRISNERVILL 156
Query: 438 DT 443
DT
Sbjct: 157 DT 158
>03_06_0407 -
33714563-33714636,33714966-33715152,33715943-33716093,
33716520-33716632,33717022-33717085,33717180-33717391,
33717540-33717621,33717811-33717866,33718004-33718072,
33718524-33718772,33718873-33719049,33719556-33719702,
33719794-33719926,33720093-33720307
Length = 642
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +3
Query: 234 KKGFRVHLMVVGESGLGKSTLVNSLFLTDLYPERV 338
K+G RV +V+G+ G GKS+LV S+ T+ +PE V
Sbjct: 13 KQGVRV--VVIGDPGTGKSSLVVSV-ATEAFPENV 44
>03_05_0990 -
29503950-29504462,29504567-29504686,29514956-29515012,
29515635-29515689,29515765-29515845,29515928-29515983,
29516112-29516256,29516347-29516415,29517355-29517467,
29517619-29517708,29518112-29518176,29519256-29519667
Length = 591
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +3
Query: 249 VHLMVVGESGLGKSTLVNSLFLTDLYPE 332
V + VVG + GKSTLV++L TDLY +
Sbjct: 288 VTVAVVGYTNAGKSTLVSALSETDLYSD 315
>05_04_0176 +
18749945-18749969,18750186-18750751,18750876-18750944,
18752128-18752325,18752791-18752922,18753658-18753744,
18753845-18754288,18754644-18754811,18755129-18755359,
18755893-18756008,18756125-18756407
Length = 772
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +3
Query: 255 LMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIE 404
L+ VGE GKST +N+L E V+P TN+ + L S V+ E
Sbjct: 217 LVTVGEFNSGKSTFINALLGRKYLQEGVVP----TTNEIMLLSYSDVDSE 262
>05_02_0030 + 5826065-5826092,5826307-5828309,5828412-5828732,
5828821-5828907,5828981-5829583,5829680-5829844,
5829941-5830235,5830320-5830534,5830621-5830926,
5831200-5831263,5831384-5831623,5831756-5831853
Length = 1474
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/30 (50%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +3
Query: 261 VVGESGLGKSTLVNSLF-LTDLYPERVIPD 347
VVG +G GK+TL+++LF L D Y R++ D
Sbjct: 1265 VVGRTGSGKTTLLSTLFRLIDPYSGRILID 1294
>03_01_0326 +
2535800-2535938,2536891-2536959,2537310-2537375,
2537979-2538100,2538501-2538629,2540462-2540569
Length = 210
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +3
Query: 255 LMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLRLTV 434
++++G+S +GKS+L+ S + + P T+ +D + G KL+LT+
Sbjct: 15 ILLIGDSAVGKSSLLVSFVSASHIDDEIAP--------TIGVDFKIKFLTVNGKKLKLTI 66
Query: 435 VDTPG 449
DT G
Sbjct: 67 WDTAG 71
>11_02_0010 + 7322826-7323658,7324236-7324714,7325204-7326195
Length = 767
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +3
Query: 216 GTQKICKKGFRVHLMVVGESGLGKSTLVNSLF 311
G++++ G R + +VG+ GLGK+TL N ++
Sbjct: 189 GSEEVEPIGQRKIVSIVGQGGLGKTTLANQVY 220
>10_08_0250 -
16179646-16179759,16180197-16180325,16180519-16180640,
16181073-16181138,16182202-16182270,16182989-16183157
Length = 222
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +3
Query: 255 LMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLRLTV 434
++++G+SG+GKS+L+ S F+ + D K+ T+ G KL+LT+
Sbjct: 22 ILLIGDSGVGKSSLLVS-FVVAAAAAHLDDDIAPTIGVDFKIKFLTI----GGKKLKLTI 76
Query: 435 VDTPG 449
DT G
Sbjct: 77 WDTAG 81
>06_03_0473 + 21190878-21191188,21191269-21192355,21192972-21193194,
21193286-21193356,21193385-21193441,21193442-21194056,
21194168-21194237,21194470-21194745,21194916-21195130,
21195224-21195529,21195750-21195813,21195902-21196141,
21196306-21196415
Length = 1214
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/30 (53%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +3
Query: 261 VVGESGLGKSTLVNSLF-LTDLYPERVIPD 347
VVG +G GKSTL++SLF L D R++ D
Sbjct: 1001 VVGRTGSGKSTLISSLFRLVDPAGGRILID 1030
>02_05_0161 +
26384079-26384086,26386173-26386226,26386376-26386448,
26386775-26386822,26386906-26386953,26387990-26388061,
26388156-26388311,26388428-26388531,26388628-26388724
Length = 219
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +3
Query: 255 LMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLRLTV 434
L+++G+SG+GKS L+ F D Y + I T+ +D +E+ G ++L +
Sbjct: 27 LLLIGDSGVGKSCLL-LRFADDSYLDSYI--------STIGVDFKIRTVEQDGKTIKLQI 77
Query: 435 VDTPG 449
DT G
Sbjct: 78 WDTAG 82
>01_01_0565 -
4159946-4160042,4160140-4160243,4160378-4160533,
4160629-4160700,4161796-4161843,4161923-4161970,
4162295-4162367,4163188-4163201
Length = 203
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +3
Query: 255 LMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLRLTV 434
L+++G+SG+GKS L+ F D Y + I T+ +D +E+ G ++L +
Sbjct: 11 LLLIGDSGVGKSCLL-LRFADDSYLDSYI--------STIGVDFKIRTVEQDGKTIKLQI 61
Query: 435 VDTPG 449
DT G
Sbjct: 62 WDTAG 66
>12_02_0722 -
22521909-22521932,22522291-22522419,22522976-22524242,
22524659-22525461
Length = 740
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 255 LMVVGESGLGKSTLVNSLF 311
+ +VG GLGK+TL NSLF
Sbjct: 189 ISIVGFGGLGKTTLANSLF 207
>12_02_0534 - 20103908-20105897,20106314-20107116
Length = 930
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 255 LMVVGESGLGKSTLVNSLF 311
+ +VG GLGK+TL NSLF
Sbjct: 189 ISIVGFGGLGKTTLANSLF 207
>07_01_0926 -
7775536-7775616,7775695-7775787,7775903-7775965,
7776326-7776423,7776661-7776761,7776865-7776937,
7778575-7778647
Length = 193
Score = 29.1 bits (62), Expect = 3.1
Identities = 25/93 (26%), Positives = 44/93 (47%)
Frame = +3
Query: 243 FRVHLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKL 422
+ + L+++G+SG+GKS L+ L +D T T+ +D IE G ++
Sbjct: 14 YLIKLLLIGDSGVGKSCLL--LRFSD-------GSFTTSFITTIGIDFKIRTIELDGKRI 64
Query: 423 RLTVVDTPGYGDAIDNTDCFRSIIQYIDDSSKD 521
+L + DT G T R+ I+ I+ + D
Sbjct: 65 KLQIWDTAGQERFRTITTDIRNWIRNIEQHASD 97
>03_06_0267 -
32751431-32751489,32751600-32751645,32751886-32751960,
32752045-32752114,32752288-32752386,32752505-32752641,
32753040-32753221,32753314-32753482,32753824-32753856,
32753958-32754068,32754184-32754295,32755592-32755727,
32756264-32756291
Length = 418
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +3
Query: 252 HLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIE 404
HL+ G SG GK TLV +L + ++ D + N+T K+D + IE
Sbjct: 100 HLLFYGPSGSGKKTLVMAL-IKQMFGAGA--DKVKMENKTWKIDTGSRNIE 147
>03_02_0267 +
6990674-6990890,6991692-6991761,6991824-6991913,
6992635-6992797,6992910-6993137
Length = 255
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 213 SGTQKICKKGFRVHLMVVGESGLGKSTLVNSL 308
S + C K R V+G S +GKS+L+N+L
Sbjct: 28 SARARDCPKDDRPEFAVLGRSNVGKSSLINAL 59
>01_06_1343 - 36461476-36461961,36463355-36463519
Length = 216
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/50 (20%), Positives = 29/50 (58%)
Frame = +3
Query: 255 LMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIE 404
++++G+SG+GKS +++ + + E E +T++++ T++ +
Sbjct: 15 IVLIGDSGVGKSNILSRFTRNEFFLESKSTIGVEFATRTLQIEGKTIKAQ 64
>11_06_0197 +
21149453-21149630,21149930-21149996,21150142-21150244,
21150901-21150971,21151091-21151154,21151239-21151304,
21151416-21151463,21151544-21151606,21151680-21151736,
21151884-21151950,21151969-21152042,21152176-21152244,
21152323-21152414,21152782-21152860,21153233-21153398,
21153826-21153950,21154089-21154351,21154473-21154569,
21154659-21154820,21154904-21155008,21155935-21156180
Length = 753
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +3
Query: 261 VVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVK 377
+VG G GKSTL+N LF T + E DA + +QT K
Sbjct: 53 IVGPQGSGKSTLLNQLFGTS-FTEM---DALKGRSQTTK 87
>10_08_0253 -
16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 231 CKKGFRVHLMVVGESGLGKSTLVNSL 308
C F +++VGE+G GK+TLV +L
Sbjct: 512 CSIKFNEPVLLVGETGTGKTTLVQNL 537
>07_01_0307 - 2194796-2199274
Length = 1492
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/64 (23%), Positives = 30/64 (46%)
Frame = +3
Query: 219 TQKICKKGFRVHLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVE 398
TQ C + + L ++G G+GK+TL+ ++ + +Q+ +D E
Sbjct: 272 TQGTCCEEYLTVLPIIGPGGIGKTTLIQHIYNSQQVQNHFQIMVWTCVSQSFSVDKLIEE 331
Query: 399 IEER 410
I+E+
Sbjct: 332 IKEK 335
>03_06_0475 +
34193951-34194023,34195414-34195486,34195572-34195672,
34195912-34196009,34196326-34196388,34196534-34196626,
34196697-34196774
Length = 192
Score = 28.7 bits (61), Expect = 4.1
Identities = 24/93 (25%), Positives = 44/93 (47%)
Frame = +3
Query: 243 FRVHLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKL 422
+ + L+++G+SG+GKS L+ L +D T T+ +D +E G ++
Sbjct: 14 YLIKLLLIGDSGVGKSCLL--LRFSD-------GSFTTSFITTIGIDFKIRTVELDGKRI 64
Query: 423 RLTVVDTPGYGDAIDNTDCFRSIIQYIDDSSKD 521
+L + DT G T R+ I+ I+ + D
Sbjct: 65 KLQIWDTAGQERFRTITTDIRNWIRNIEQHASD 97
>10_01_0198 -
2158139-2158334,2158517-2158641,2158736-2158789,
2159038-2159342,2159677-2159860,2159908-2159999,
2161777-2161885
Length = 354
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/19 (57%), Positives = 18/19 (94%)
Frame = +3
Query: 246 RVHLMVVGESGLGKSTLVN 302
+V ++VVG+SG+GKS+LV+
Sbjct: 27 QVRVLVVGDSGVGKSSLVH 45
>08_02_1311 -
26039741-26039930,26040185-26040316,26040528-26040676,
26040807-26040893,26041338-26041420,26042008-26042137
Length = 256
Score = 28.3 bits (60), Expect = 5.4
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Frame = +3
Query: 231 CKKGFRVHLMVV-GESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEE 407
C K + + +V+ G SG GK+ L L D + + E+ N T L + E+E
Sbjct: 46 CLKSSKANTIVLSGLSGSGKTILFYQL--RDGSTHQGTVTSMEQNNDTFVLHS---ELER 100
Query: 408 RGVKLRLTVVDTPGYG---DAIDNTDCFRSIIQYIDDSSKDFFETRAA 542
RG + VVD PG+ +D + I Y+ D ++DF T A
Sbjct: 101 RGKVKPVHVVDVPGHARLKPKLDEVLPQAAGIVYVVD-AQDFLSTMHA 147
>04_04_1183 - 31537196-31537290,31537665-31537986,31538176-31538277,
31538826-31539071,31539385-31539506,31539588-31540344,
31540447-31540770,31540872-31541052,31541208-31541602,
31541877-31541942,31542225-31542377,31542593-31542691,
31542776-31542982,31543432-31543572,31543852-31544019,
31544302-31544395,31544479-31544585,31545140-31545274,
31545549-31545656,31545975-31546049,31546197-31546262,
31546500-31546556,31546678-31546702,31546809-31546889,
31546966-31547080,31547211-31547370,31547444-31547483,
31547599-31547780,31547905-31548234
Length = 1650
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/30 (40%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +3
Query: 261 VVGESGLGKSTLVNSLF-LTDLYPERVIPD 347
+VG +G GKS+++N+LF + +L R++ D
Sbjct: 1299 IVGRTGAGKSSMLNALFRIVELERGRILVD 1328
>12_01_0840 -
7847239-7847531,7847576-7847675,7848312-7848388,
7848486-7848738
Length = 240
Score = 27.9 bits (59), Expect = 7.1
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Frame = +3
Query: 318 DLYPERVIPDATEKTNQTVKLDASTVEIEER----GVKLRLTVVDTPGYG 455
DL P R+I D K T K VE+ R GV + VV PGYG
Sbjct: 97 DLEPWRIIEDVQVKVGATEKEVELLVEVMGRVEVVGVVVDRAVVVDPGYG 146
>11_06_0278 -
21854859-21855101,21855529-21855587,21855684-21855711,
21855812-21856702,21856792-21857011,21857638-21857687,
21863174-21863284,21863379-21863483,21863568-21863693,
21863796-21865187
Length = 1074
Score = 27.9 bits (59), Expect = 7.1
Identities = 28/115 (24%), Positives = 46/115 (40%), Gaps = 3/115 (2%)
Frame = +3
Query: 165 LKSGNTWLCWICQSA*SGTQKICKKGFRVHLMVVGESGLGKSTLVNSLFLTDLYPERVIP 344
+K W+CW+C + K F++H V E +S L PER+
Sbjct: 213 VKDNREWICWLCPQC--EMTFLTAKTFQLH---VEEDEFSRSQEFKESLL--FVPERISD 265
Query: 345 DATEKTN-QTVKLDASTVEIEERGVKLRLTVVDTPGY--GDAIDNTDCFRSIIQY 500
+ TE T+ D + E E G K+ + T Y + D F ++I++
Sbjct: 266 EQTEFIKCWTLPSDVNPTE-EAEGEKILTKIKSTFQYLKDQKALSVDLFDNLIKF 319
>07_03_0203 +
15138864-15140452,15140629-15140726,15141924-15142235,
15142437-15142749,15144025-15146023,15147033-15147068
Length = 1448
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 234 KKGFRVHLMVVGESGLGKSTLVNSLF--LTDLYPERVIPDATEKTNQTVKL 380
++G +V L +VG GLGK+ L N ++ L + + RV T++ V L
Sbjct: 689 EQGLKV-LSIVGFGGLGKTALANEVYHELGEQFEYRVFVSVTQRPQIAVLL 738
>04_01_0568 - 7279478-7279590,7279749-7279988,7280078-7280141,
7280242-7280547,7280643-7280857,7281395-7281689,
7281906-7281983,7282070-7282705,7283016-7283102,
7283945-7284265,7285503-7287599
Length = 1483
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 261 VVGESGLGKSTLVNSLF-LTDLYPERVIPDATE 356
VVG +G GKSTLV +LF L + +I D +
Sbjct: 1269 VVGRTGSGKSTLVQALFRLVEPVEGHIIVDGVD 1301
>11_04_0305 -
16162063-16162096,16162282-16164365,16165283-16165351,
16168317-16169288,16169548-16169650,16170427-16170509
Length = 1114
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 255 LMVVGESGLGKSTLVNSLFLTDLYPER 335
L +VG G+GK+TL ++F D E+
Sbjct: 242 LAIVGVGGIGKTTLAKNIFNDDAIQEK 268
>09_04_0527 - 18337968-18338077,18338440-18341212
Length = 960
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +3
Query: 222 QKICKKGFRVHLMVV-GESGLGKSTLVNSLF 311
+ +C + + ++ V G GLGKSTLVN+++
Sbjct: 197 ESLCLEDCSLRIIAVWGMGGLGKSTLVNNVY 227
>08_02_0059 - 11778739-11780998,11781744-11781751
Length = 755
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +3
Query: 255 LMVVGESGLGKSTLVNSL 308
+ VVG+SG+GK+ LVNS+
Sbjct: 34 IYVVGDSGVGKTILVNSV 51
>06_01_0169 - 1346281-1349188,1350069-1350184
Length = 1007
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 255 LMVVGESGLGKSTLVNSLF 311
L VVG GLGK+TLV +F
Sbjct: 189 LCVVGMGGLGKTTLVRKIF 207
>05_07_0003 +
26981956-26982190,26982258-26982318,26982739-26982833,
26983304-26983479,26983738-26983959,26984041-26984279,
26984786-26985311,26985407-26985680,26985759-26986410,
26986508-26986736,26986841-26987107,26987180-26987443,
26987526-26988194
Length = 1302
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +3
Query: 249 VHLMVVGESGLGKSTLVN 302
+ + +VGESG GKST++N
Sbjct: 421 ITMAIVGESGSGKSTVIN 438
>05_04_0033 - 17369134-17369321,17369522-17370355,17370429-17373042
Length = 1211
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 225 KICKKGFRVHLMVVGESGLGKSTLVNSLF 311
K C + R + +VG G+GKSTL ++
Sbjct: 206 KTCAEASRFVVSIVGPGGMGKSTLAQYVY 234
>04_03_0687 +
18713603-18713962,18715318-18715539,18717068-18717256,
18717419-18717612,18718193-18718328
Length = 366
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/17 (58%), Positives = 16/17 (94%)
Frame = +3
Query: 258 MVVGESGLGKSTLVNSL 308
++VG SG+GKS+L+N+L
Sbjct: 160 VIVGPSGVGKSSLINAL 176
>01_06_1699 - 39269477-39269574,39269690-39269929,39270029-39270092,
39270251-39270771,39271032-39271326,39271400-39271564,
39271650-39272237,39272617-39272703,39272982-39274429,
39274515-39275015,39275574-39275678,39276095-39276143
Length = 1386
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 261 VVGESGLGKSTLVNSLF 311
VVG +G GKSTL+++LF
Sbjct: 1177 VVGRTGSGKSTLIHALF 1193
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,320,374
Number of Sequences: 37544
Number of extensions: 266155
Number of successful extensions: 1229
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1228
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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