Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060716.seq
(636 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36446| Best HMM Match : GTP_CDC (HMM E-Value=0) 132 2e-31
SB_52502| Best HMM Match : GTP_CDC (HMM E-Value=1.9e-06) 121 4e-28
SB_6352| Best HMM Match : GTP_CDC (HMM E-Value=1.49939e-42) 86 3e-17
SB_31708| Best HMM Match : GTP_CDC (HMM E-Value=0) 71 8e-13
SB_53505| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.084
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 33 0.19
SB_11458| Best HMM Match : GTP_CDC (HMM E-Value=2.6e-09) 33 0.19
SB_49128| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_10158| Best HMM Match : MMR_HSR1 (HMM E-Value=9.4e-08) 31 0.59
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.78
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.78
SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13) 31 0.78
SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_16466| Best HMM Match : DUF258 (HMM E-Value=0) 30 1.4
SB_59345| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 29 2.4
SB_46160| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_24089| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_8391| Best HMM Match : Dynamin_N (HMM E-Value=9.7e-18) 29 4.2
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 29 4.2
SB_59779| Best HMM Match : Thyroglobulin_1 (HMM E-Value=1.2e-26) 28 5.5
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 28 7.3
SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_20978| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 27 9.7
SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_36446| Best HMM Match : GTP_CDC (HMM E-Value=0)
Length = 384
Score = 132 bits (319), Expect = 2e-31
Identities = 61/100 (61%), Positives = 78/100 (78%)
Frame = +3
Query: 222 QKICKKGFRVHLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEI 401
+K KKGF +MVVGESGLGKSTL+NSLFLTDLY P EK N+TV++ TVE+
Sbjct: 16 RKSVKKGFEFTVMVVGESGLGKSTLLNSLFLTDLYTPSSYPSIKEKLNKTVEVKPCTVEL 75
Query: 402 EERGVKLRLTVVDTPGYGDAIDNTDCFRSIIQYIDDSSKD 521
+E GV+LRLTVVDTPG+GDA+DNTDC++ +I+YID ++
Sbjct: 76 KEGGVRLRLTVVDTPGFGDAVDNTDCWKPVIKYIDSKFEE 115
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +1
Query: 184 GYVGFANLPNQVHRKSVKKGFEFTLWWSGK 273
GYVGFANLPNQV RKSVKKGFEFT+ G+
Sbjct: 3 GYVGFANLPNQVFRKSVKKGFEFTVMVVGE 32
Score = 50.8 bits (116), Expect = 9e-07
Identities = 21/39 (53%), Positives = 25/39 (64%)
Frame = +2
Query: 509 QFERFLRDESGLNRRNIVDNRIHCCFYFISPFXHRVKPL 625
+FE L ES + R DNR+HCC YFISP H +KPL
Sbjct: 112 KFEEHLNAESRVQRSPFPDNRVHCCLYFISPTGHSLKPL 150
>SB_52502| Best HMM Match : GTP_CDC (HMM E-Value=1.9e-06)
Length = 101
Score = 121 bits (292), Expect = 4e-28
Identities = 59/83 (71%), Positives = 69/83 (83%)
Frame = +3
Query: 222 QKICKKGFRVHLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEI 401
+K KKGF LMVVGESGLGKSTL++SLFLTDLY +R I A E+ +TVK++ STVEI
Sbjct: 16 RKSVKKGFEFTLMVVGESGLGKSTLIDSLFLTDLYSDRKILSAEERIKKTVKIETSTVEI 75
Query: 402 EERGVKLRLTVVDTPGYGDAIDN 470
EERGVKLRLTVVDTPGYGD I++
Sbjct: 76 EERGVKLRLTVVDTPGYGDGINH 98
Score = 55.6 bits (128), Expect = 3e-08
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +1
Query: 187 YVGFANLPNQVHRKSVKKGFEFTLWWSGK 273
YVGFANLPNQVHRKSVKKGFEFTL G+
Sbjct: 4 YVGFANLPNQVHRKSVKKGFEFTLMVVGE 32
>SB_6352| Best HMM Match : GTP_CDC (HMM E-Value=1.49939e-42)
Length = 275
Score = 85.8 bits (203), Expect = 3e-17
Identities = 47/104 (45%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Frame = +3
Query: 222 QKICKKGFRVHLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTN---QTVKLDAST 392
+K K+GF +LMVVG SGLGKST+VN+LF L P +T K +TV + + +
Sbjct: 106 RKSLKRGFEFNLMVVGASGLGKSTMVNTLFKGKLSR----PTSTGKPTIIPKTVDVKSVS 161
Query: 393 VEIEERGVKLRLTVVDTPGYGDAIDNTDCFRSIIQYIDDSSKDF 524
IEE+GV+L+LT+ DTPG+GD I+N C+ I+ YI+ F
Sbjct: 162 HVIEEKGVRLKLTITDTPGFGDQINNDKCWEPIMDYINSQYDKF 205
Score = 50.4 bits (115), Expect = 1e-06
Identities = 19/40 (47%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = +2
Query: 509 QFERFLRDESGLNRR-NIVDNRIHCCFYFISPFXHRVKPL 625
Q+++FL +E + R+ I D+R+HCC YFI+P HR+KP+
Sbjct: 201 QYDKFLTEEVTIERKPRIPDSRVHCCLYFIAPTGHRLKPI 240
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = +1
Query: 118 NIKKLLKMSNETNKTFSNLETP--GYVGFANLPNQVHRKSVKKGFEFTL 258
N +++ + ++ + L+TP GYVGF + Q+ RKS+K+GFEF L
Sbjct: 69 NFIEIMMDTMQSMTQWGKLKTPLDGYVGFDTVQEQIRRKSLKRGFEFNL 117
>SB_31708| Best HMM Match : GTP_CDC (HMM E-Value=0)
Length = 272
Score = 70.9 bits (166), Expect = 8e-13
Identities = 30/56 (53%), Positives = 43/56 (76%)
Frame = +3
Query: 357 KTNQTVKLDASTVEIEERGVKLRLTVVDTPGYGDAIDNTDCFRSIIQYIDDSSKDF 524
+ QTV ++++TVEIEE+GV+LRLTVVDTPG+ DA+DNT + I+ YID + +
Sbjct: 32 RIGQTVHIESNTVEIEEKGVRLRLTVVDTPGFADAVDNTYSWEPIVDYIDHQFESY 87
Score = 68.1 bits (159), Expect = 6e-12
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = +2
Query: 509 QFERFLRDESGLNRRNIVDNRIHCCFYFISPFXHRVKPL 625
QFE +LRDESGLNRRNI+D R+HCC YFI+P H ++P+
Sbjct: 83 QFESYLRDESGLNRRNIMDTRVHCCLYFINPHGHGLRPV 121
>SB_53505| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 34.3 bits (75), Expect = 0.084
Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 9/96 (9%)
Frame = +3
Query: 261 VVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTN---------QTVKLDASTVEIEERG 413
++GE GKSTL+N L + P T + + Q + LD + + G
Sbjct: 44 IIGEPNSGKSTLINQLVGEKIVAVTEKPHTTRQVSRGVFTSGGTQIILLDTPGLVTQSEG 103
Query: 414 VKLRLTVVDTPGYGDAIDNTDCFRSIIQYIDDSSKD 521
+L++T GDA+D+ D I + ++D
Sbjct: 104 KRLKMTREHIKAPGDALDDADIIGVICDASNKRTRD 139
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/57 (28%), Positives = 35/57 (61%)
Frame = +3
Query: 234 KKGFRVHLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIE 404
+K ++ ++VG+ G+GK++L+ S ++ D +P +P A + + TV+++ IE
Sbjct: 14 RKKEQLKCVIVGDGGVGKTSLLVS-YMMDGFPNSYVPTAFDTYHVTVEVNKKLCMIE 69
>SB_11458| Best HMM Match : GTP_CDC (HMM E-Value=2.6e-09)
Length = 337
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +3
Query: 420 LRLTVVDTPGYGDAIDNTDCFRSI 491
L+LT+VDT GYGD I+ D +S+
Sbjct: 2 LKLTIVDTVGYGDQINKEDSLKSL 25
>SB_49128| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 464
Score = 32.7 bits (71), Expect = 0.26
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Frame = +3
Query: 342 PDATEKTNQ-TVKLDASTVEIEE-------RGVKLRLTVVDTPGYGDAIDNTDCFRSIIQ 497
P K N+ T + D S E+ E R VKL+ T++ + DA N +C+ +IQ
Sbjct: 8 PSTDSKWNRLTFERDESKYELWEAKCFGYLRMVKLKDTILPSTDEPDATKNEECYAELIQ 67
Query: 498 YIDD 509
++DD
Sbjct: 68 FLDD 71
>SB_10158| Best HMM Match : MMR_HSR1 (HMM E-Value=9.4e-08)
Length = 340
Score = 31.5 bits (68), Expect = 0.59
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +3
Query: 255 LMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGV-KLRLT 431
++VVG +G+GKS LVN+L E V+ + Q + STV E+ + + R+T
Sbjct: 63 VIVVGRTGVGKSHLVNTLM-----GEYVVEE-----GQDLDPCTSTVSKHEKRIGRTRVT 112
Query: 432 VVDTPGYGD 458
V D+PG D
Sbjct: 113 VWDSPGLQD 121
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 249 VHLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEI 401
V L+VVG+ G+GKS + + T+ +P IP + + + LD +
Sbjct: 6 VKLVVVGDGGVGKSAFLITA-TTNAFPGEYIPTVFDNYSSNIMLDGKAYNV 55
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 31.1 bits (67), Expect = 0.78
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = +3
Query: 255 LMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLRLTV 434
+++VGESG+GKS+L+ L TD + PD K+ TVE G K +L +
Sbjct: 11 ILIVGESGVGKSSLL--LRFTD---DTFDPDIGATIGVDFKVKTLTVE----GNKAKLAI 61
Query: 435 VDTPG 449
DT G
Sbjct: 62 WDTAG 66
>SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13)
Length = 1383
Score = 31.1 bits (67), Expect = 0.78
Identities = 21/68 (30%), Positives = 35/68 (51%)
Frame = +3
Query: 246 RVHLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLR 425
+V + +VG G GK+TLV +L + + D+ E+T L+ S +++ E LR
Sbjct: 567 QVKVTIVGGEGAGKTTLVKALGFKYNWKLSTVMDSEERTK---GLEISNIDLNE---SLR 620
Query: 426 LTVVDTPG 449
+ V D G
Sbjct: 621 MKVFDLGG 628
>SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +3
Query: 243 FRVHLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEER 410
+R +M++G+ GK++L SLF P V + E T ++D V +R
Sbjct: 289 YRGRIMLIGQDRAGKTSLKKSLFGIPFDPSEVSTEGIEVDPSTFEVDVEQVSRWQR 344
>SB_16466| Best HMM Match : DUF258 (HMM E-Value=0)
Length = 293
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/64 (34%), Positives = 30/64 (46%)
Frame = +3
Query: 258 MVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLRLTVV 437
M G SG+GKSTLVN+L T + I D+ + T T E + ++
Sbjct: 180 MFSGHSGVGKSTLVNALEPTLNLKTKQISDSHSQGQHT------TTFAEMYDLTFDAKII 233
Query: 438 DTPG 449
DTPG
Sbjct: 234 DTPG 237
>SB_59345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 408 RGVKLRLTVVDTPGYGDAIDNTDCFRSIIQYIDDSS 515
R +KL+ T++ + DA N +C+ +IQ+ D+ S
Sbjct: 38 RMLKLKDTILPSTDAPDATKNEECYAELIQFFDNKS 73
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = +3
Query: 231 CKKGFRVHLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEER 410
CK F+V +VVG+ G+GK++L+ T Y + ++ TV +D T ++
Sbjct: 8 CKYSFKV--LVVGDPGVGKTSLIRR--FTKGY-------FCDNSSSTVGVDVGTRVLDIH 56
Query: 411 GVKLRLTVVDTPG 449
G +++L DT G
Sbjct: 57 GDRVKLQCWDTAG 69
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 29.5 bits (63), Expect = 2.4
Identities = 23/71 (32%), Positives = 36/71 (50%)
Frame = +3
Query: 246 RVHLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLR 425
R+ +++VG+S GK+ L+N+ V EK TV ST +E G ++
Sbjct: 232 RIPVILVGDSECGKTALLNAY---------VRNQFNEKYEATVFNSLSTA-VEVDGERIE 281
Query: 426 LTVVDTPGYGD 458
LT+ DT G+ D
Sbjct: 282 LTLWDTSGHED 292
>SB_46160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1488
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 176 KHLVMLDLPICLIRYTENL*KRVSSSPYGGRG 271
+H ++L + +C RY + +RVS + YG +G
Sbjct: 1395 RHALVLQVTVCRARYAQRCVRRVSITGYGVQG 1426
>SB_24089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 693
Score = 28.7 bits (61), Expect = 4.2
Identities = 26/83 (31%), Positives = 41/83 (49%)
Frame = +3
Query: 261 VVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLRLTVVD 440
VVG +GKS+++NSL + P T K+ Q V+LD ++ G+ V+D
Sbjct: 460 VVGFPNVGKSSIINSLKRSRTCTVGATPGVT-KSMQEVQLDKHIKLLDSPGI-----VMD 513
Query: 441 TPGYGDAIDNTDCFRSIIQYIDD 509
T AI +C + I+ I+D
Sbjct: 514 TGDSDAAIILRNCVK--IENIED 534
>SB_8391| Best HMM Match : Dynamin_N (HMM E-Value=9.7e-18)
Length = 957
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 255 LMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIE 404
++VVG++ GKS+L+N L P IP T + + D + VE++
Sbjct: 95 ILVVGQTNSGKSSLINELLGGTYLPTAEIP-CTSRIVRICYSDNNYVEVQ 143
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +3
Query: 225 KICKKGFRVHLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIE 404
KIC+ F+ L+++GES +GKS+LV + + QTV LD +TV+ E
Sbjct: 18 KICQ--FK--LVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
>SB_59779| Best HMM Match : Thyroglobulin_1 (HMM E-Value=1.2e-26)
Length = 452
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 390 TVEIEERGVKLRLTVVDTPGYGDAIDNT 473
TV +EE +LR +VDT G+ D DNT
Sbjct: 251 TVVLEEYLSQLRFNLVDTRGFFDIDDNT 278
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/50 (22%), Positives = 28/50 (56%)
Frame = +3
Query: 255 LMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIE 404
++++G+SG+GKS L++ + E E +++++D T++ +
Sbjct: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
>SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 246 RVHLMVVGESGLGKSTLVNSLFLTDLYPERVI 341
R L VVG++ GK++L+N+L +D+ E +
Sbjct: 61 RYKLSVVGDAESGKTSLLNALVKSDIEVEETV 92
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 27.5 bits (58), Expect = 9.7
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Frame = +3
Query: 255 LMVVGESGLGKSTLVNSLFLTDLYPERVIPD-ATEKTNQTVKLDASTVEIE--ERGVKLR 425
+++VG++ +GK+ LV F +P P + T +TV +D V+++ + + R
Sbjct: 10 IILVGDANVGKTCLVRQ-FTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDTAGQER 68
Query: 426 LTVVDTPGYGDA--------IDNTDCFRSIIQYIDDSSK 518
+ Y +A I N F S+ Q++DD+++
Sbjct: 69 FRSITQSYYHNADGVIVTYDITNKKSFESLPQWLDDTNR 107
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 27.5 bits (58), Expect = 9.7
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Frame = +3
Query: 255 LMVVGESGLGKS--------TLVNSLFLTDLYPERVIPDA----TEKTNQTVKLDASTVE 398
L+++G+SG+GKS +L L L +Y + TE T+ +D
Sbjct: 11 LLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYISTIGVDFKIRT 70
Query: 399 IEERGVKLRLTVVDTPG 449
IE G ++L + DT G
Sbjct: 71 IELDGKTIKLQIWDTAG 87
>SB_20978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1683
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = -3
Query: 445 GVSTTVKRSFTPRSSISTVDASNFTVWFVFSVASGITRSGYKSVKNKELTRVDLP 281
GVSTTVK S+ + W + S+ + ++ + VK + D+P
Sbjct: 589 GVSTTVKSERVHLPFASSAVKGTVSAWIIKSICAPVSAIDWSEVKRRYAHLCDVP 643
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 243 FRVHLMVVGESGLGKSTLVNSL 308
+R+ LMVVG G GK+TL+ +L
Sbjct: 665 YRMKLMVVGIQGYGKTTLLAAL 686
>SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1315
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 261 VVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVK 377
+VG +G GKS+LV +LF RV+ D + N ++
Sbjct: 1107 IVGRTGAGKSSLVAALFRMPEPKGRVLIDGVDLGNLDIQ 1145
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,052,385
Number of Sequences: 59808
Number of extensions: 324244
Number of successful extensions: 1241
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1239
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1596754500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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