Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060716.seq
         (636 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    29   0.12 
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    29   0.12 
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    29   0.12 
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            27   0.66 
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   6.1  

>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 29.1 bits (62), Expect = 0.12
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 255 LMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTN 365
           L V+G SG GK+TL+N+L        ++ P+A    N
Sbjct: 129 LAVMGSSGAGKTTLLNALAFRSPPGVKISPNAVRALN 165


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 29.1 bits (62), Expect = 0.12
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 255 LMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTN 365
           L V+G SG GK+TL+N+L        ++ P+A    N
Sbjct: 129 LAVMGSSGAGKTTLLNALAFRSPPGVKISPNAVRALN 165


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 29.1 bits (62), Expect = 0.12
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 255 LMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTN 365
           L V+G SG GK+TL+N+L        ++ P+A    N
Sbjct: 107 LAVMGSSGAGKTTLLNALAFRSPPGVKISPNAVRALN 143


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 26.6 bits (56), Expect = 0.66
 Identities = 19/60 (31%), Positives = 32/60 (53%)
 Frame = +3

Query: 225 KICKKGFRVHLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIE 404
           KIC+  F+  L+++GES +GKS+LV        +  +          QT+ +D +TV+ E
Sbjct: 21  KICQ--FK--LVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFE 76


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 557 IVDNRIHCCFYFISPFXHRVKP 622
           I  N +H C  ++SP+ H   P
Sbjct: 634 IYKNLLHACRSYLSPYQHGFVP 655


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,216
Number of Sequences: 2352
Number of extensions: 11235
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)