Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060715.seq
         (641 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    25   0.70 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    25   0.70 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   2.8  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   3.7  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   3.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   4.9  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   6.5  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   6.5  
AY531876-1|AAT08870.1|   38|Tribolium castaneum unknown protein.       21   8.6  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 24.6 bits (51), Expect = 0.70
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = -3

Query: 609 LVLVGHSLRK*TVIGQESRPVQSGIVFSVSGLDRYE-ASNTEVSGGQY 469
           L + GH L      G+   PV+   + S SG +RY+   N + + G Y
Sbjct: 360 LTIQGHDLTLIATDGEPVHPVRVNTIISFSG-ERYDFVINADQTPGAY 406


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 24.6 bits (51), Expect = 0.70
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = -3

Query: 609 LVLVGHSLRK*TVIGQESRPVQSGIVFSVSGLDRYE-ASNTEVSGGQY 469
           L + GH L      G+   PV+   + S SG +RY+   N + + G Y
Sbjct: 360 LTIQGHDLTLIATDGEPVHPVRVNTIISFSG-ERYDFVINADQTPGAY 406


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory
          receptor candidate 40 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 16 RGSSAGFKLPPFKNIIHKVLVILSAVCV 99
          RG+   F+LP   N + KVL++   V V
Sbjct: 13 RGTPPKFELPTTHNCLKKVLLLSQIVGV 40


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
 Frame = -1

Query: 521 LAWT--GTKPATPRSPEGSIFHRIK 453
           LAW     KP   RS  GSI+H +K
Sbjct: 153 LAWEFPENKPKKIRSKLGSIWHSVK 177


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 476 PPETSVLLASYRSKP 520
           PP+ + +LASY+S P
Sbjct: 213 PPQETPVLASYKSVP 227


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 102  IITIKMVAGGKQMNVRVTTMD 164
            IIT + V GG   ++RV T D
Sbjct: 988  IITAEEVPGGPPTSIRVETND 1008


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 412 LLYELIGDILRIEFGSEFELQW 347
           L + L GD+L +    E +L W
Sbjct: 145 LSFNLFGDLLTLFIKEELDLVW 166


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 213 FDQVVKTIGLREVWSSVFS 269
           FDQ+V      E W+ VF+
Sbjct: 259 FDQIVNVAYRMETWNVVFN 277


>AY531876-1|AAT08870.1|   38|Tribolium castaneum unknown protein.
          Length = 38

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +3

Query: 186 QQTTTGKQLFDQVVKTIGLREV 251
           Q+T  GK+LF+ +++T  +  V
Sbjct: 5   QRTGLGKRLFEHMLQTESIEPV 26


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,528
Number of Sequences: 336
Number of extensions: 3307
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)