Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060715.seq
(641 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80439-6|AAB37642.1| 564|Caenorhabditis elegans Ezrin/radixin/m... 144 4e-35
U80439-5|AAB37643.1| 563|Caenorhabditis elegans Ezrin/radixin/m... 144 4e-35
AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein. 144 4e-35
AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein. 144 4e-35
AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein. 144 4e-35
AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv prot... 144 4e-35
AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein. 144 4e-35
AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein. 144 4e-35
AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein. 144 4e-35
U10414-4|AAW30666.1| 641|Caenorhabditis elegans Neurofibromatos... 85 5e-17
U10414-3|AAK68385.1| 709|Caenorhabditis elegans Neurofibromatos... 85 5e-17
U10414-2|AAA19073.1| 654|Caenorhabditis elegans Neurofibromatos... 85 5e-17
U80955-5|AAG01559.2| 573|Caenorhabditis elegans Ferm domain (pr... 60 1e-09
U80955-4|ABB51180.1| 589|Caenorhabditis elegans Ferm domain (pr... 60 1e-09
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z82089-3|CAB05004.2| 634|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z81499-5|CAB04091.2| 634|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr... 33 0.23
U80839-15|AAB37911.1| 430|Caenorhabditis elegans Hypothetical p... 29 2.8
AL033514-28|CAA22089.1| 340|Caenorhabditis elegans Hypothetical... 29 3.7
Z83216-8|CAB05677.1| 261|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81575-7|CAB04638.1| 367|Caenorhabditis elegans Hypothetical pr... 28 6.5
U23453-4|AAC46756.2| 564|Caenorhabditis elegans Acid sphingomye... 28 6.5
AF036700-1|AAB88364.1| 258|Caenorhabditis elegans Hypothetical ... 28 6.5
>U80439-6|AAB37642.1| 564|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform b protein.
Length = 564
Score = 144 bits (350), Expect = 4e-35
Identities = 66/95 (69%), Positives = 80/95 (84%)
Frame = +2
Query: 257 FGLQYTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYL 436
FGLQYTD+KG TW+KL KKV+ QDVKK+ L FKFRAKFYPEDVA+E+IQ++T++LFYL
Sbjct: 47 FGLQYTDNKGFPTWLKLNKKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYL 106
Query: 437 QVKNAILSDEIYCPPETSVLLASYRSKPDTENTIP 541
QVK+ ILSDEIYCPPETSVLLASY + + +P
Sbjct: 107 QVKDGILSDEIYCPPETSVLLASYAMQAKYGDYVP 141
Score = 77.8 bits (183), Expect = 6e-15
Identities = 37/46 (80%), Positives = 42/46 (91%)
Frame = +3
Query: 117 MVAGGKQMNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLREVW 254
MVA G +NVRVT+MD+ELEFAIQ +TTGKQLFDQVVKTIGLRE+W
Sbjct: 1 MVAAG-DINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIW 45
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +1
Query: 511 VQARHGEHNPALHGPGFLANDRLLPQRVTDQHKMSREEW 627
+QA++G++ P H G L DRLLPQRV Q K++ EEW
Sbjct: 132 MQAKYGDYVPETHVAGCLTADRLLPQRVLGQFKLNSEEW 170
>U80439-5|AAB37643.1| 563|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform a protein.
Length = 563
Score = 144 bits (350), Expect = 4e-35
Identities = 66/95 (69%), Positives = 80/95 (84%)
Frame = +2
Query: 257 FGLQYTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYL 436
FGLQYTD+KG TW+KL KKV+ QDVKK+ L FKFRAKFYPEDVA+E+IQ++T++LFYL
Sbjct: 46 FGLQYTDNKGFPTWLKLNKKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYL 105
Query: 437 QVKNAILSDEIYCPPETSVLLASYRSKPDTENTIP 541
QVK+ ILSDEIYCPPETSVLLASY + + +P
Sbjct: 106 QVKDGILSDEIYCPPETSVLLASYAMQAKYGDYVP 140
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/41 (82%), Positives = 39/41 (95%)
Frame = +3
Query: 132 KQMNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLREVW 254
K +NVRVT+MD+ELEFAIQ +TTGKQLFDQVVKTIGLRE+W
Sbjct: 4 KAINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIW 44
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +1
Query: 511 VQARHGEHNPALHGPGFLANDRLLPQRVTDQHKMSREEW 627
+QA++G++ P H G L DRLLPQRV Q K++ EEW
Sbjct: 131 MQAKYGDYVPETHVAGCLTADRLLPQRVLGQFKLNSEEW 169
>AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein.
Length = 566
Score = 144 bits (350), Expect = 4e-35
Identities = 66/95 (69%), Positives = 80/95 (84%)
Frame = +2
Query: 257 FGLQYTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYL 436
FGLQYTD+KG TW+KL KKV+ QDVKK+ L FKFRAKFYPEDVA+E+IQ++T++LFYL
Sbjct: 46 FGLQYTDNKGFPTWLKLNKKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYL 105
Query: 437 QVKNAILSDEIYCPPETSVLLASYRSKPDTENTIP 541
QVK+ ILSDEIYCPPETSVLLASY + + +P
Sbjct: 106 QVKDGILSDEIYCPPETSVLLASYAMQAKYGDYVP 140
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/41 (82%), Positives = 39/41 (95%)
Frame = +3
Query: 132 KQMNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLREVW 254
K +NVRVT+MD+ELEFAIQ +TTGKQLFDQVVKTIGLRE+W
Sbjct: 4 KAINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIW 44
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +1
Query: 511 VQARHGEHNPALHGPGFLANDRLLPQRVTDQHKMSREEW 627
+QA++G++ P H G L DRLLPQRV Q K++ EEW
Sbjct: 131 MQAKYGDYVPETHVAGCLTADRLLPQRVLGQFKLNSEEW 169
>AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 144 bits (350), Expect = 4e-35
Identities = 66/95 (69%), Positives = 80/95 (84%)
Frame = +2
Query: 257 FGLQYTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYL 436
FGLQYTD+KG TW+KL KKV+ QDVKK+ L FKFRAKFYPEDVA+E+IQ++T++LFYL
Sbjct: 46 FGLQYTDNKGFPTWLKLNKKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYL 105
Query: 437 QVKNAILSDEIYCPPETSVLLASYRSKPDTENTIP 541
QVK+ ILSDEIYCPPETSVLLASY + + +P
Sbjct: 106 QVKDGILSDEIYCPPETSVLLASYAMQAKYGDYVP 140
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/41 (82%), Positives = 39/41 (95%)
Frame = +3
Query: 132 KQMNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLREVW 254
K +NVRVT+MD+ELEFAIQ +TTGKQLFDQVVKTIGLRE+W
Sbjct: 4 KAINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIW 44
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +1
Query: 511 VQARHGEHNPALHGPGFLANDRLLPQRVTDQHKMSREEW 627
+QA++G++ P H G L DRLLPQRV Q K++ EEW
Sbjct: 131 MQAKYGDYVPETHVAGCLTADRLLPQRVLGQFKLNSEEW 169
>AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 144 bits (350), Expect = 4e-35
Identities = 66/95 (69%), Positives = 80/95 (84%)
Frame = +2
Query: 257 FGLQYTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYL 436
FGLQYTD+KG TW+KL KKV+ QDVKK+ L FKFRAKFYPEDVA+E+IQ++T++LFYL
Sbjct: 47 FGLQYTDNKGFPTWLKLNKKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYL 106
Query: 437 QVKNAILSDEIYCPPETSVLLASYRSKPDTENTIP 541
QVK+ ILSDEIYCPPETSVLLASY + + +P
Sbjct: 107 QVKDGILSDEIYCPPETSVLLASYAMQAKYGDYVP 141
Score = 77.8 bits (183), Expect = 6e-15
Identities = 37/46 (80%), Positives = 42/46 (91%)
Frame = +3
Query: 117 MVAGGKQMNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLREVW 254
MVA G +NVRVT+MD+ELEFAIQ +TTGKQLFDQVVKTIGLRE+W
Sbjct: 1 MVAAG-DINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIW 45
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +1
Query: 511 VQARHGEHNPALHGPGFLANDRLLPQRVTDQHKMSREEW 627
+QA++G++ P H G L DRLLPQRV Q K++ EEW
Sbjct: 132 MQAKYGDYVPETHVAGCLTADRLLPQRVLGQFKLNSEEW 170
>AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv
protein.
Length = 566
Score = 144 bits (350), Expect = 4e-35
Identities = 66/95 (69%), Positives = 80/95 (84%)
Frame = +2
Query: 257 FGLQYTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYL 436
FGLQYTD+KG TW+KL KKV+ QDVKK+ L FKFRAKFYPEDVA+E+IQ++T++LFYL
Sbjct: 46 FGLQYTDNKGFPTWLKLNKKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYL 105
Query: 437 QVKNAILSDEIYCPPETSVLLASYRSKPDTENTIP 541
QVK+ ILSDEIYCPPETSVLLASY + + +P
Sbjct: 106 QVKDGILSDEIYCPPETSVLLASYAMQAKYGDYVP 140
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/41 (82%), Positives = 39/41 (95%)
Frame = +3
Query: 132 KQMNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLREVW 254
K +NVRVT+MD+ELEFAIQ +TTGKQLFDQVVKTIGLRE+W
Sbjct: 4 KAINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIW 44
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +1
Query: 511 VQARHGEHNPALHGPGFLANDRLLPQRVTDQHKMSREEW 627
+QA++G++ P H G L DRLLPQRV Q K++ EEW
Sbjct: 131 MQAKYGDYVPETHVAGCLTADRLLPQRVLGQFKLNSEEW 169
>AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 144 bits (350), Expect = 4e-35
Identities = 66/95 (69%), Positives = 80/95 (84%)
Frame = +2
Query: 257 FGLQYTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYL 436
FGLQYTD+KG TW+KL KKV+ QDVKK+ L FKFRAKFYPEDVA+E+IQ++T++LFYL
Sbjct: 46 FGLQYTDNKGFPTWLKLNKKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYL 105
Query: 437 QVKNAILSDEIYCPPETSVLLASYRSKPDTENTIP 541
QVK+ ILSDEIYCPPETSVLLASY + + +P
Sbjct: 106 QVKDGILSDEIYCPPETSVLLASYAMQAKYGDYVP 140
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/41 (82%), Positives = 39/41 (95%)
Frame = +3
Query: 132 KQMNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLREVW 254
K +NVRVT+MD+ELEFAIQ +TTGKQLFDQVVKTIGLRE+W
Sbjct: 4 KAINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIW 44
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +1
Query: 511 VQARHGEHNPALHGPGFLANDRLLPQRVTDQHKMSREEW 627
+QA++G++ P H G L DRLLPQRV Q K++ EEW
Sbjct: 131 MQAKYGDYVPETHVAGCLTADRLLPQRVLGQFKLNSEEW 169
>AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 144 bits (350), Expect = 4e-35
Identities = 66/95 (69%), Positives = 80/95 (84%)
Frame = +2
Query: 257 FGLQYTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYL 436
FGLQYTD+KG TW+KL KKV+ QDVKK+ L FKFRAKFYPEDVA+E+IQ++T++LFYL
Sbjct: 47 FGLQYTDNKGFPTWLKLNKKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYL 106
Query: 437 QVKNAILSDEIYCPPETSVLLASYRSKPDTENTIP 541
QVK+ ILSDEIYCPPETSVLLASY + + +P
Sbjct: 107 QVKDGILSDEIYCPPETSVLLASYAMQAKYGDYVP 141
Score = 77.8 bits (183), Expect = 6e-15
Identities = 37/46 (80%), Positives = 42/46 (91%)
Frame = +3
Query: 117 MVAGGKQMNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLREVW 254
MVA G +NVRVT+MD+ELEFAIQ +TTGKQLFDQVVKTIGLRE+W
Sbjct: 1 MVAAG-DINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIW 45
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +1
Query: 511 VQARHGEHNPALHGPGFLANDRLLPQRVTDQHKMSREEW 627
+QA++G++ P H G L DRLLPQRV Q K++ EEW
Sbjct: 132 MQAKYGDYVPETHVAGCLTADRLLPQRVLGQFKLNSEEW 170
>AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 144 bits (350), Expect = 4e-35
Identities = 66/95 (69%), Positives = 80/95 (84%)
Frame = +2
Query: 257 FGLQYTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYL 436
FGLQYTD+KG TW+KL KKV+ QDVKK+ L FKFRAKFYPEDVA+E+IQ++T++LFYL
Sbjct: 46 FGLQYTDNKGFPTWLKLNKKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYL 105
Query: 437 QVKNAILSDEIYCPPETSVLLASYRSKPDTENTIP 541
QVK+ ILSDEIYCPPETSVLLASY + + +P
Sbjct: 106 QVKDGILSDEIYCPPETSVLLASYAMQAKYGDYVP 140
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/41 (82%), Positives = 39/41 (95%)
Frame = +3
Query: 132 KQMNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLREVW 254
K +NVRVT+MD+ELEFAIQ +TTGKQLFDQVVKTIGLRE+W
Sbjct: 4 KAINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIW 44
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +1
Query: 511 VQARHGEHNPALHGPGFLANDRLLPQRVTDQHKMSREEW 627
+QA++G++ P H G L DRLLPQRV Q K++ EEW
Sbjct: 131 MQAKYGDYVPETHVAGCLTADRLLPQRVLGQFKLNSEEW 169
>U10414-4|AAW30666.1| 641|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform c protein.
Length = 641
Score = 84.6 bits (200), Expect = 5e-17
Identities = 41/87 (47%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Frame = +2
Query: 257 FGLQYTDSKGDLTWIKLYKKVMQQDVKKENP---LQFKFRAKFYPEDVADELIQEITLKL 427
FGLQ+T+ K W++ K + QD++K+ F F KFYPEDV E+I + T L
Sbjct: 55 FGLQFTNKKNIPCWLQNDKTICGQDIQKDTSDGTFNFLFLVKFYPEDVEPEIILDATRHL 114
Query: 428 FYLQVKNAILSDEIYCPPETSVLLASY 508
F+LQ++ AILS +YC PE SVLLAS+
Sbjct: 115 FFLQIREAILSMNLYCSPEASVLLASF 141
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/42 (50%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = +3
Query: 132 KQMNVRVTTMDAELE-FAIQQTTTGKQLFDQVVKTIGLREVW 254
K + +V+TMDA+LE I++T TG+ LF+ V + IGLRE W
Sbjct: 12 KPIYAKVSTMDADLEKIVIEKTWTGRHLFEAVCRIIGLRETW 53
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +1
Query: 475 PSGDLGVAGFVPVQARHGEHNPALHGPGFLANDRLLPQRVTDQHKMSREEW 627
P + +A F VQA HG+ + GP L D+ LP+ V DQ+ MS + W
Sbjct: 132 PEASVLLASFA-VQAMHGDCTEEV-GPIDL--DKHLPKSVIDQYDMSADMW 178
>U10414-3|AAK68385.1| 709|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform b protein.
Length = 709
Score = 84.6 bits (200), Expect = 5e-17
Identities = 41/87 (47%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Frame = +2
Query: 257 FGLQYTDSKGDLTWIKLYKKVMQQDVKKENP---LQFKFRAKFYPEDVADELIQEITLKL 427
FGLQ+T+ K W++ K + QD++K+ F F KFYPEDV E+I + T L
Sbjct: 55 FGLQFTNKKNIPCWLQNDKTICGQDIQKDTSDGTFNFLFLVKFYPEDVEPEIILDATRHL 114
Query: 428 FYLQVKNAILSDEIYCPPETSVLLASY 508
F+LQ++ AILS +YC PE SVLLAS+
Sbjct: 115 FFLQIREAILSMNLYCSPEASVLLASF 141
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/42 (50%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = +3
Query: 132 KQMNVRVTTMDAELE-FAIQQTTTGKQLFDQVVKTIGLREVW 254
K + +V+TMDA+LE I++T TG+ LF+ V + IGLRE W
Sbjct: 12 KPIYAKVSTMDADLEKIVIEKTWTGRHLFEAVCRIIGLRETW 53
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +1
Query: 475 PSGDLGVAGFVPVQARHGEHNPALHGPGFLANDRLLPQRVTDQHKMSREEW 627
P + +A F VQA HG+ + GP L D+ LP+ V DQ+ MS + W
Sbjct: 132 PEASVLLASFA-VQAMHGDCTEEV-GPIDL--DKHLPKSVIDQYDMSADMW 178
>U10414-2|AAA19073.1| 654|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform a protein.
Length = 654
Score = 84.6 bits (200), Expect = 5e-17
Identities = 41/87 (47%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Frame = +2
Query: 257 FGLQYTDSKGDLTWIKLYKKVMQQDVKKENP---LQFKFRAKFYPEDVADELIQEITLKL 427
FGLQ+T+ K W++ K + QD++K+ F F KFYPEDV E+I + T L
Sbjct: 55 FGLQFTNKKNIPCWLQNDKTICGQDIQKDTSDGTFNFLFLVKFYPEDVEPEIILDATRHL 114
Query: 428 FYLQVKNAILSDEIYCPPETSVLLASY 508
F+LQ++ AILS +YC PE SVLLAS+
Sbjct: 115 FFLQIREAILSMNLYCSPEASVLLASF 141
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/42 (50%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = +3
Query: 132 KQMNVRVTTMDAELE-FAIQQTTTGKQLFDQVVKTIGLREVW 254
K + +V+TMDA+LE I++T TG+ LF+ V + IGLRE W
Sbjct: 12 KPIYAKVSTMDADLEKIVIEKTWTGRHLFEAVCRIIGLRETW 53
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +1
Query: 475 PSGDLGVAGFVPVQARHGEHNPALHGPGFLANDRLLPQRVTDQHKMSREEW 627
P + +A F VQA HG+ + GP L D+ LP+ V DQ+ MS + W
Sbjct: 132 PEASVLLASFA-VQAMHGDCTEEV-GPIDL--DKHLPKSVIDQYDMSADMW 178
>U80955-5|AAG01559.2| 573|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 2,
isoform a protein.
Length = 573
Score = 60.1 bits (139), Expect = 1e-09
Identities = 31/84 (36%), Positives = 47/84 (55%)
Frame = +2
Query: 257 FGLQYTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYL 436
FGLQYTD W+ KKV +Q V P +FR KF+ + + L +E+T F+L
Sbjct: 76 FGLQYTDPFNVQHWLDPTKKVAKQ-VAIGPPFTLRFRVKFFTSEPSSNLKEELTRYQFFL 134
Query: 437 QVKNAILSDEIYCPPETSVLLASY 508
Q+K I S + CP + ++ LA++
Sbjct: 135 QIKQDISSGRLQCPHQLAIELAAF 158
>U80955-4|ABB51180.1| 589|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 2,
isoform b protein.
Length = 589
Score = 60.1 bits (139), Expect = 1e-09
Identities = 31/84 (36%), Positives = 47/84 (55%)
Frame = +2
Query: 257 FGLQYTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYL 436
FGLQYTD W+ KKV +Q V P +FR KF+ + + L +E+T F+L
Sbjct: 92 FGLQYTDPFNVQHWLDPTKKVAKQ-VAIGPPFTLRFRVKFFTSEPSSNLKEELTRYQFFL 150
Query: 437 QVKNAILSDEIYCPPETSVLLASY 508
Q+K I S + CP + ++ LA++
Sbjct: 151 QIKQDISSGRLQCPHQLAIELAAF 174
>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical
protein H05G16.1 protein.
Length = 1111
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/84 (32%), Positives = 44/84 (52%)
Frame = +2
Query: 257 FGLQYTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYL 436
FGL + D G+ W+ K +++Q +F F KFY + D L +E T LF +
Sbjct: 86 FGLSFIDINGNHCWLDREKTILRQITNGSTDAKFYFVVKFYTPNPID-LEEEYTRYLFTM 144
Query: 437 QVKNAILSDEIYCPPETSVLLASY 508
Q+K + E++C T+ LL++Y
Sbjct: 145 QIKRDLALGELHCSDNTASLLSAY 168
>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical
protein ZK270.2e protein.
Length = 4541
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = +2
Query: 269 YTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYLQVKN 448
Y +G W+ K + +Q K P +F F KFYP ++ + +LQ++
Sbjct: 82 YDKDEGTRHWLYNDKNIAKQI--KGLPWEFSFEVKFYP-TTPTTIVDDHARYYVFLQLRR 138
Query: 449 AILSDEIYCPPETSVLLASY 508
+L+ + +T LL S+
Sbjct: 139 DLLTGRLPATADTHSLLGSF 158
>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical
protein ZK270.2d protein.
Length = 4648
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = +2
Query: 269 YTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYLQVKN 448
Y +G W+ K + +Q K P +F F KFYP ++ + +LQ++
Sbjct: 71 YDKDEGTRHWLYNDKNIAKQI--KGLPWEFSFEVKFYP-TTPTTIVDDHARYYVFLQLRR 127
Query: 449 AILSDEIYCPPETSVLLASY 508
+L+ + +T LL S+
Sbjct: 128 DLLTGRLPATADTHSLLGSF 147
>Z82089-3|CAB05004.2| 634|Caenorhabditis elegans Hypothetical
protein ZK270.2b protein.
Length = 634
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = +2
Query: 269 YTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYLQVKN 448
Y +G W+ K + +Q K P +F F KFYP ++ + +LQ++
Sbjct: 71 YDKDEGTRHWLYNDKNIAKQI--KGLPWEFSFEVKFYP-TTPTTIVDDHARYYVFLQLRR 127
Query: 449 AILSDEIYCPPETSVLLASY 508
+L+ + +T LL S+
Sbjct: 128 DLLTGRLPATADTHSLLGSF 147
>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical
protein ZK270.2a protein.
Length = 4530
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = +2
Query: 269 YTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYLQVKN 448
Y +G W+ K + +Q K P +F F KFYP ++ + +LQ++
Sbjct: 71 YDKDEGTRHWLYNDKNIAKQI--KGLPWEFSFEVKFYP-TTPTTIVDDHARYYVFLQLRR 127
Query: 449 AILSDEIYCPPETSVLLASY 508
+L+ + +T LL S+
Sbjct: 128 DLLTGRLPATADTHSLLGSF 147
>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical
protein ZK270.2e protein.
Length = 4541
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = +2
Query: 269 YTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYLQVKN 448
Y +G W+ K + +Q K P +F F KFYP ++ + +LQ++
Sbjct: 82 YDKDEGTRHWLYNDKNIAKQI--KGLPWEFSFEVKFYP-TTPTTIVDDHARYYVFLQLRR 138
Query: 449 AILSDEIYCPPETSVLLASY 508
+L+ + +T LL S+
Sbjct: 139 DLLTGRLPATADTHSLLGSF 158
>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical
protein ZK270.2d protein.
Length = 4648
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = +2
Query: 269 YTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYLQVKN 448
Y +G W+ K + +Q K P +F F KFYP ++ + +LQ++
Sbjct: 71 YDKDEGTRHWLYNDKNIAKQI--KGLPWEFSFEVKFYP-TTPTTIVDDHARYYVFLQLRR 127
Query: 449 AILSDEIYCPPETSVLLASY 508
+L+ + +T LL S+
Sbjct: 128 DLLTGRLPATADTHSLLGSF 147
>Z81499-5|CAB04091.2| 634|Caenorhabditis elegans Hypothetical
protein ZK270.2b protein.
Length = 634
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = +2
Query: 269 YTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYLQVKN 448
Y +G W+ K + +Q K P +F F KFYP ++ + +LQ++
Sbjct: 71 YDKDEGTRHWLYNDKNIAKQI--KGLPWEFSFEVKFYP-TTPTTIVDDHARYYVFLQLRR 127
Query: 449 AILSDEIYCPPETSVLLASY 508
+L+ + +T LL S+
Sbjct: 128 DLLTGRLPATADTHSLLGSF 147
>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical
protein ZK270.2a protein.
Length = 4530
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = +2
Query: 269 YTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYLQVKN 448
Y +G W+ K + +Q K P +F F KFYP ++ + +LQ++
Sbjct: 71 YDKDEGTRHWLYNDKNIAKQI--KGLPWEFSFEVKFYP-TTPTTIVDDHARYYVFLQLRR 127
Query: 449 AILSDEIYCPPETSVLLASY 508
+L+ + +T LL S+
Sbjct: 128 DLLTGRLPATADTHSLLGSF 147
>U80839-15|AAB37911.1| 430|Caenorhabditis elegans Hypothetical
protein ZC204.2 protein.
Length = 430
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 255 SSVFSTPTPRATSLGSSCIRR*CNKTSRKRIHCSSNSEPNSILRMSPMSS 404
SS ++P+ S+GS+ + + + HC+ P S SP+SS
Sbjct: 155 SSKSNSPSESTKSMGSAVLSSSTEPRTPEESHCAPEKSPESTENASPLSS 204
>AL033514-28|CAA22089.1| 340|Caenorhabditis elegans Hypothetical
protein Y75B8A.29 protein.
Length = 340
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/70 (24%), Positives = 30/70 (42%)
Frame = +2
Query: 203 EATLRSSCEDDRPPRGVVFGLQYTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYP 382
EA + ED+ G D+ GDL W + +KK+ + K + Q + R
Sbjct: 66 EAKMLDDIEDEYTDNNYNEGYSKMDTDGDLEWEEEFKKLNKDPSKMDKREQERHRQMAKN 125
Query: 383 EDVADELIQE 412
+ A + +Q+
Sbjct: 126 REYARKCVQK 135
>Z83216-8|CAB05677.1| 261|Caenorhabditis elegans Hypothetical
protein C08F11.10 protein.
Length = 261
Score = 27.9 bits (59), Expect = 6.5
Identities = 24/83 (28%), Positives = 38/83 (45%)
Frame = +2
Query: 221 SCEDDRPPRGVVFGLQYTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVADE 400
S DD P G +GL ++ + L +K QQD E+ + R + Y + D
Sbjct: 8 SIADDGPYSGSFYGLAEDNANHGIFSSILKRKKRQQDKLSEDVKKRCGRVESY-KSCCDR 66
Query: 401 LIQEITLKLFYLQVKNAILSDEI 469
L Q L Y+ V+NA+ S ++
Sbjct: 67 LHQ----ALMYMLVENAVTSKQL 85
>Z81575-7|CAB04638.1| 367|Caenorhabditis elegans Hypothetical
protein R08H2.8 protein.
Length = 367
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 525 VSGLDRYEASNTEVSGGQYISSDKIAFFT 439
V+GL E++N VSGGQY+S + +T
Sbjct: 82 VTGLQLSESNNQIVSGGQYLSVVMLGKYT 110
>U23453-4|AAC46756.2| 564|Caenorhabditis elegans Acid
sphingomyelinase protein 1 protein.
Length = 564
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +2
Query: 206 ATLRSSCEDDRPPRGVVFGLQYTDSKGDLT---WIKLYKKVMQQDVKKENPLQFKFRAKF 376
A L + ED +P ++ + DL+ W K+ +K+ + K+E Q+ FR F
Sbjct: 476 ADLEKATEDKKPVWEKLYSARQAHGMDDLSPLSWNKVIQKLFTSEKKREKFYQYAFR-NF 534
Query: 377 YPE 385
P+
Sbjct: 535 SPQ 537
>AF036700-1|AAB88364.1| 258|Caenorhabditis elegans Hypothetical
protein M04G7.1 protein.
Length = 258
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 467 IYCPPETSVLLASYRSK-PDTENTIPLCTGRDSW 565
+YCP S+ L + +K P+ NT+P CT R ++
Sbjct: 177 LYCPRTCSLCLWAAATKIPNCGNTLPDCTTRGNY 210
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,304,649
Number of Sequences: 27780
Number of extensions: 326827
Number of successful extensions: 928
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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