Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060714.seq
         (633 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.53 
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    23   2.8  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   6.5  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   6.5  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   6.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   8.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
 Frame = +3

Query: 249 SIHFFLVCLFKYR---YYLYVITVYNSLNIFIYVCV*LFGNMFI*FC 380
           +IH    C+       YY Y   +  ++++ + VC+  F  M + FC
Sbjct: 223 TIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFC 269



 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/43 (23%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +3

Query: 258 FFLVCLFKY--RYYLYVITVYNSLNIFIYVCV*LFGNMFI*FC 380
           FFL+C++ +   + ++ + +   L I+ + C  +   M + FC
Sbjct: 141 FFLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFC 183


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 279 KYRYYLYVITVYNSLNIF 332
           K+  YLY I+V   LN+F
Sbjct: 393 KFPIYLYRISVETKLNVF 410


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 279 KYRYYLYVITVYNSLNIF 332
           K+  YLY ++V   LN+F
Sbjct: 395 KFPIYLYRMSVETKLNVF 412


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 279 KYRYYLYVITVYNSLNIF 332
           K+  YLY ++V   LN+F
Sbjct: 393 KFPIYLYRMSVETKLNVF 410


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 279 KYRYYLYVITVYNSLNIF 332
           K+  YLY ++V   LN+F
Sbjct: 395 KFPIYLYRMSVETKLNVF 412


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 264 LVCLFKYRYYLYVITVY 314
           L  +F + Y++Y+ TVY
Sbjct: 141 LQLVFVFCYFIYLFTVY 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,590
Number of Sequences: 336
Number of extensions: 2290
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)