Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060712.seq
(639 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O60518 Cluster: Ran-binding protein 6; n=68; Eumetazoa|... 86 8e-16
UniRef50_UPI0000DB70D1 Cluster: PREDICTED: similar to Karyopheri... 81 2e-14
UniRef50_UPI0000DA3D66 Cluster: PREDICTED: similar to RAN bindin... 72 1e-11
UniRef50_Q5C159 Cluster: SJCHGC08761 protein; n=1; Schistosoma j... 62 1e-08
UniRef50_Q5T576 Cluster: RAN binding protein 5; n=9; Euteleostom... 58 2e-07
UniRef50_A7PW36 Cluster: Chromosome chr8 scaffold_34, whole geno... 48 1e-04
UniRef50_Q00WP4 Cluster: Karyopherin (Importin) beta 3; n=1; Ost... 47 4e-04
UniRef50_Q9N5V3 Cluster: Importin beta family protein 3; n=2; Ca... 46 8e-04
UniRef50_Q2UN71 Cluster: Karyopherin; n=14; Pezizomycotina|Rep: ... 45 0.001
UniRef50_A6R7C2 Cluster: Putative uncharacterized protein; n=1; ... 40 0.038
UniRef50_A7PYL2 Cluster: Chromosome chr12 scaffold_38, whole gen... 40 0.051
UniRef50_A5AVQ9 Cluster: Putative uncharacterized protein; n=2; ... 40 0.051
UniRef50_O74476 Cluster: Importin beta-3 subunit; n=1; Schizosac... 38 0.15
UniRef50_A4QRM7 Cluster: Putative uncharacterized protein; n=1; ... 36 0.62
UniRef50_Q22UQ4 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_Q00SR0 Cluster: Karyopherin (Importin) beta 3; n=2; Ost... 35 1.4
UniRef50_Q94LC1 Cluster: Putative uncharacterized protein OSJNBa... 35 1.9
UniRef50_A7PYY0 Cluster: Chromosome chr4 scaffold_39, whole geno... 35 1.9
UniRef50_Q6C1P3 Cluster: Similar to sp|P32337 Saccharomyces cere... 33 4.4
UniRef50_P32337 Cluster: Importin beta-3 subunit; n=10; Saccharo... 33 4.4
UniRef50_A7R7P4 Cluster: Chromosome undetermined scaffold_1922, ... 33 5.8
UniRef50_Q5KFR0 Cluster: Importin beta-4 subunit, putative; n=2;... 33 7.7
>UniRef50_O60518 Cluster: Ran-binding protein 6; n=68;
Eumetazoa|Rep: Ran-binding protein 6 - Homo sapiens
(Human)
Length = 1105
Score = 85.8 bits (203), Expect = 8e-16
Identities = 44/124 (35%), Positives = 73/124 (58%)
Frame = +3
Query: 264 LARNHIDDDGNNQWPEFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIKG 443
LARN ID+DG N WPE L+F+ +++ + E + +F PG+FG ++ +LD+IK
Sbjct: 124 LARNLIDEDGTNHWPEGLKFLIDSIYSKNVVLWEVALHVFWHFPGIFGTQERHDLDIIKR 183
Query: 444 MLISALQPNESMALRTQGS*S*GAFILLHDKEPIIQKHFSDVLLPLMQVIVLSIEAADDD 623
+L +Q E A+RT + + AF+L ++ + K F+D+L ++Q + S DDD
Sbjct: 184 LLDQCIQDQEHPAIRTLSARAAAAFVLANENNIALFKDFADLLPGILQAVNDSC-YQDDD 242
Query: 624 SALK 635
S L+
Sbjct: 243 SVLE 246
Score = 53.2 bits (122), Expect = 5e-06
Identities = 26/83 (31%), Positives = 46/83 (55%)
Frame = +1
Query: 7 EDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXXXXXXXXQQTVL 186
E+ Y NIP K L+++++N +VRQ AA LLRRL S+ Q +
Sbjct: 38 EEIYENIPGLCKTTFLLDAVRNRRAGYEVRQMAAALLRRLLSSGFEEVYPNLPADVQRDV 97
Query: 187 REQLLLTLQMDLSQYLRRKVCDV 255
+ +L+L ++++ +R+K+CD+
Sbjct: 98 KIELILAVKLETHASMRKKLCDI 120
>UniRef50_UPI0000DB70D1 Cluster: PREDICTED: similar to Karyopherin
3 CG1059-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
to Karyopherin 3 CG1059-PA - Apis mellifera
Length = 1040
Score = 81.0 bits (191), Expect = 2e-14
Identities = 38/85 (44%), Positives = 57/85 (67%)
Frame = +1
Query: 4 HEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXXXXXXXXQQTV 183
H DAYNN+P ++KV L+ S+ NA + E++R AAVLLRRLFS+ Q
Sbjct: 43 HSDAYNNLPVDSKVTFLLTSLCNATLTEEMRAMAAVLLRRLFSSEFMDFYPKIPPEAQAQ 102
Query: 184 LREQLLLTLQMDLSQYLRRKVCDVS 258
L+EQ+LL++Q + ++ +RRKVC+V+
Sbjct: 103 LKEQILLSVQNEQTETIRRKVCEVA 127
Score = 70.5 bits (165), Expect = 3e-11
Identities = 34/78 (43%), Positives = 47/78 (60%)
Frame = +3
Query: 153 PEIAI*AADSAQRTIVTHPSNGSFPVLTKKGL*CVSELARNHIDDDGNNQWPEFLQFMFT 332
P+I A + I+ N + +K +E+ARN ID+DGNNQWPEFLQF+F
Sbjct: 93 PKIPPEAQAQLKEQILLSVQNEQTETIRRKVCEVAAEVARNLIDEDGNNQWPEFLQFLFQ 152
Query: 333 CASAQDPNIKEAGIRMFT 386
CA++ P +KE +RMFT
Sbjct: 153 CANSPVPALKENALRMFT 170
Score = 57.6 bits (133), Expect = 2e-07
Identities = 30/63 (47%), Positives = 40/63 (63%)
Frame = +3
Query: 450 ISALQPNESMALRTQGS*S*GAFILLHDKEPIIQKHFSDVLLPLMQVIVLSIEAADDDSA 629
+ AL+ N Q + GAFI+LHDKE IQKHFS++L ++QVI S+E DD+
Sbjct: 158 VPALKENALRMFTFQAVRAIGAFIILHDKEENIQKHFSELLPAIVQVIAQSVEKQGDDAL 217
Query: 630 LKV 638
LKV
Sbjct: 218 LKV 220
>UniRef50_UPI0000DA3D66 Cluster: PREDICTED: similar to RAN binding
protein 5; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to RAN binding protein 5 - Rattus norvegicus
Length = 1056
Score = 72.1 bits (169), Expect = 1e-11
Identities = 32/84 (38%), Positives = 51/84 (60%)
Frame = +1
Query: 7 EDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLFSAXXXXXXXXXXXXQQTVL 186
E+ Y NIP +K+ L+ +I+N AE+ RQ AAVLLRRL S+ QT +
Sbjct: 154 EETYENIPGRSKITFLLQAIRNTTAAEEARQMAAVLLRRLLSSAFDEVYPALPSDVQTAI 213
Query: 187 REQLLLTLQMDLSQYLRRKVCDVS 258
+ +LL+ +QM+ +R+K+CD++
Sbjct: 214 KSELLMIIQMETQSSMRKKICDIA 237
>UniRef50_Q5C159 Cluster: SJCHGC08761 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08761 protein - Schistosoma
japonicum (Blood fluke)
Length = 183
Score = 61.7 bits (143), Expect = 1e-08
Identities = 27/83 (32%), Positives = 50/83 (60%)
Frame = +3
Query: 177 DSAQRTIVTHPSNGSFPVLTKKGL*CVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPN 356
+SA++ +V + + ++ +K +SEL R DDDGN++WPEF + +++ D
Sbjct: 101 NSAKQQLVLIVVHENEQLMRRKVADLISELVRMEFDDDGNSRWPEFTPILLDWSTSPDSG 160
Query: 357 IKEAGIRMFTSVPGVFGNRQTEN 425
++E +F SVP +FGN+Q ++
Sbjct: 161 LREIACHIFGSVPSLFGNQQAQS 183
>UniRef50_Q5T576 Cluster: RAN binding protein 5; n=9;
Euteleostomi|Rep: RAN binding protein 5 - Homo sapiens
(Human)
Length = 126
Score = 57.6 bits (133), Expect = 2e-07
Identities = 25/51 (49%), Positives = 36/51 (70%)
Frame = +3
Query: 231 LTKKGL*CVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNIKEAGIRMF 383
+ KK +ELARN ID+DGNNQWPE L+F+F S+Q+ ++EA + +F
Sbjct: 76 MRKKVCDIAAELARNLIDEDGNNQWPEGLKFLFDSVSSQNVGLREAALHIF 126
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/57 (38%), Positives = 34/57 (59%)
Frame = +1
Query: 88 DVRQTAAVLLRRLFSAXXXXXXXXXXXXQQTVLREQLLLTLQMDLSQYLRRKVCDVS 258
+ RQ AAVLLRRL S+ QT ++ +LL+ +QM+ +R+KVCD++
Sbjct: 28 EARQMAAVLLRRLLSSAFDEVYPALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIA 84
>UniRef50_A7PW36 Cluster: Chromosome chr8 scaffold_34, whole genome
shotgun sequence; n=15; Magnoliophyta|Rep: Chromosome
chr8 scaffold_34, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1116
Score = 48.4 bits (110), Expect = 1e-04
Identities = 34/133 (25%), Positives = 63/133 (47%)
Frame = +3
Query: 231 LTKKGL*CVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGN 410
++KK VSELA + D G WPE L FMF C ++ + ++EA + +F + G
Sbjct: 120 ISKKLCDTVSELASGILPDGG---WPELLPFMFQCVTSSNFKLQEAALLIFAQLSQYIGE 176
Query: 411 RQTENLDVIKGMLISALQPNESMALRTQGS*S*GAFILLHDKEPIIQKHFSDVLLPLMQV 590
+LD + + + +L + + +R + FI K F D+L +MQ
Sbjct: 177 TLLPHLDTLHSVFLQSLASSMNSDVRIAALGAAINFIQCLSNAAERDK-FQDLLPLMMQT 235
Query: 591 IVLSIEAADDDSA 629
+ ++ ++ + +A
Sbjct: 236 LTEALNSSQEATA 248
>UniRef50_Q00WP4 Cluster: Karyopherin (Importin) beta 3; n=1;
Ostreococcus tauri|Rep: Karyopherin (Importin) beta 3 -
Ostreococcus tauri
Length = 1024
Score = 46.8 bits (106), Expect = 4e-04
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Frame = +3
Query: 297 NQWPEFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIKGMLISALQPNES 476
N+WPE L+FM CA++ + + R+F S+ + +E+ + G+ +AL+ +E
Sbjct: 63 NEWPELLEFMGQCANSPETAHRALAFRLFESLTETIASALSEHFGTLAGLFANALR-DEC 121
Query: 477 MALRTQGS*S*GAFILLHDKEPIIQKHFSDVLLP-LMQVIVLSIEAADDDSA 629
+RT + GA + EP Q + L+P ++ ++ D+DSA
Sbjct: 122 DEVRTSALRAVGALVANSSGEP-EQVNAIKALVPHVLDAAKTAVLNGDEDSA 172
>UniRef50_Q9N5V3 Cluster: Importin beta family protein 3; n=2;
Caenorhabditis|Rep: Importin beta family protein 3 -
Caenorhabditis elegans
Length = 1092
Score = 46.0 bits (104), Expect = 8e-04
Identities = 31/134 (23%), Positives = 61/134 (45%)
Frame = +3
Query: 231 LTKKGL*CVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGN 410
+ KK +SE+A N IDD G+ W L+ M C ++D + + P +FGN
Sbjct: 100 IKKKIADLISEIASNLIDDSGDMTWGGVLELMDHCLKSEDLTGNYIALLILRGCPIIFGN 159
Query: 411 RQTENLDVIKGMLISALQPNESMALRTQGS*S*GAFILLHDKEPIIQKHFSDVLLPLMQV 590
R L +K +++ + ++ + AF + +D+E + + + ++ ++QV
Sbjct: 160 RLAHFLPTLK-VVLEKCMATPDLQIKATAVRAVIAFAVDNDEEKDVVRLMTSLVPNVLQV 218
Query: 591 IVLSIEAADDDSAL 632
+ + D D L
Sbjct: 219 CNETSDEDDSDGPL 232
>UniRef50_Q2UN71 Cluster: Karyopherin; n=14; Pezizomycotina|Rep:
Karyopherin - Aspergillus oryzae
Length = 1095
Score = 45.2 bits (102), Expect = 0.001
Identities = 18/49 (36%), Positives = 32/49 (65%)
Frame = +3
Query: 255 VSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNIKEAGIRMFTSVPGV 401
V+E+AR + D+ +QWPE L +F + + D ++EA R+F++ PG+
Sbjct: 125 VAEIARQYTDN--GDQWPELLGVLFQASQSPDAGLREAAFRIFSTTPGI 171
>UniRef50_A6R7C2 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 1091
Score = 40.3 bits (90), Expect = 0.038
Identities = 16/56 (28%), Positives = 32/56 (57%)
Frame = +3
Query: 255 VSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNRQTE 422
V+E+A + D+ QW E L +F + + DP ++++ R+F++ PG+ + E
Sbjct: 125 VAEIAGQYADN--GEQWSELLGVLFQASQSTDPGMRDSAFRIFSTTPGIIEKQHEE 178
>UniRef50_A7PYL2 Cluster: Chromosome chr12 scaffold_38, whole genome
shotgun sequence; n=9; Magnoliophyta|Rep: Chromosome
chr12 scaffold_38, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1048
Score = 39.9 bits (89), Expect = 0.051
Identities = 22/112 (19%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Frame = +3
Query: 300 QWPEFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIKGMLISALQPNESM 479
+WP+ L F+F C+ + + +E + +F+S+ G + ++ +L+ LQ S
Sbjct: 115 EWPDLLPFLFQCSQSAQEDHREVALILFSSLTETIGIAFRPHFADLQALLLKCLQDETSN 174
Query: 480 ALRTQGS*S*GAFI-LLHDKEPIIQKHFSDVLLPLMQVIVLSIEAADDDSAL 632
+R + G+F+ D +++ F + + ++ V + + ++D A+
Sbjct: 175 RVRVAALKAVGSFLEFTQDGAEVVK--FREFIPSILNVSRQCLASGEEDVAI 224
>UniRef50_A5AVQ9 Cluster: Putative uncharacterized protein; n=2;
Magnoliophyta|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 1028
Score = 39.9 bits (89), Expect = 0.051
Identities = 22/112 (19%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Frame = +3
Query: 300 QWPEFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIKGMLISALQPNESM 479
+WP+ L F+F C+ + + +E + +F+S+ G + ++ +L+ LQ S
Sbjct: 115 EWPDLLPFLFQCSQSAQEDHREVALILFSSLTETIGIAFRPHFADLQALLLKCLQDETSN 174
Query: 480 ALRTQGS*S*GAFI-LLHDKEPIIQKHFSDVLLPLMQVIVLSIEAADDDSAL 632
+R + G+F+ D +++ F + + ++ V + + ++D A+
Sbjct: 175 RVRVAALKAVGSFLEFTQDGAEVVK--FREFIPSILNVSRQCLASGEEDVAI 224
>UniRef50_O74476 Cluster: Importin beta-3 subunit; n=1;
Schizosaccharomyces pombe|Rep: Importin beta-3 subunit -
Schizosaccharomyces pombe (Fission yeast)
Length = 1095
Score = 38.3 bits (85), Expect = 0.15
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +3
Query: 219 SFPVLTKKGL*CVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNIKEAGIRMFTSVPG 398
S P + K ++E+AR+ D G +WPE + +F ++ D + +E+ R TS+P
Sbjct: 111 SVPTVRNKLCDTIAEIARSIYDCQG--EWPELINVIFNAVNSPDESFRESVFRTITSLPR 168
Query: 399 VFGNRQT 419
+ + +
Sbjct: 169 LLSGQDS 175
>UniRef50_A4QRM7 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 1144
Score = 36.3 bits (80), Expect = 0.62
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +3
Query: 255 VSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENL 428
V+E+AR D+G + WP+ L +F + A D +E R+F + PG+ + E++
Sbjct: 125 VAEVARQ-CSDNGVS-WPDLLAALFQLSMAPDAGKREISFRVFATTPGIIEKQHEESV 180
>UniRef50_Q22UQ4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1113
Score = 35.5 bits (78), Expect = 1.1
Identities = 13/48 (27%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 252 CVSELARNHIDD-DGNNQWPEFLQFMFTCASAQDPNIKEAGIRMFTSV 392
C+ EL + ++D D NQWPE + +++ + + E+G ++ T++
Sbjct: 160 CIGELGGSLLEDKDAGNQWPELISIVWSLFMKESVELLESGFKILTNL 207
>UniRef50_Q00SR0 Cluster: Karyopherin (Importin) beta 3; n=2;
Ostreococcus|Rep: Karyopherin (Importin) beta 3 -
Ostreococcus tauri
Length = 1517
Score = 35.1 bits (77), Expect = 1.4
Identities = 27/133 (20%), Positives = 58/133 (43%)
Frame = +3
Query: 231 LTKKGL*CVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGN 410
+++K + E+A + D WPE + FMF+ S +KE+ + +F + +
Sbjct: 824 ISRKTCDLICEVAAGGSERD--EPWPELMPFMFSAVSEGGEGLKESALNVFAMLAPLMSE 881
Query: 411 RQTENLDVIKGMLISALQPNESMALRTQGS*S*GAFILLHDKEPIIQKHFSDVLLPLMQV 590
+ + L +L +++ +R + +F+ + K F D+L +M
Sbjct: 882 ALVGQIPTLHATLNGSLASSDTQ-VRLAALRATCSFVDALENASDRTK-FQDLLPAMMNT 939
Query: 591 IVLSIEAADDDSA 629
+V ++ D+ SA
Sbjct: 940 LVEALRGQDESSA 952
>UniRef50_Q94LC1 Cluster: Putative uncharacterized protein
OSJNBa0026A15.29; n=2; Oryza sativa|Rep: Putative
uncharacterized protein OSJNBa0026A15.29 - Oryza sativa
(Rice)
Length = 151
Score = 34.7 bits (76), Expect = 1.9
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 3 ARGRIQQHSNRNKSSAPSEFNSKCRHCRRCASNGGRA 113
A GRIQ+ ++ AP+EF S C RR GGR+
Sbjct: 6 ATGRIQRPASATPCCAPAEFGSACGPARRTTIGGGRS 42
>UniRef50_A7PYY0 Cluster: Chromosome chr4 scaffold_39, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_39, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1100
Score = 34.7 bits (76), Expect = 1.9
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = +3
Query: 264 LARNHIDDDGNNQWPEFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIKG 443
L + +D ++WPE + FM C A D ++E + +F + G + + D ++
Sbjct: 123 LCKLALDVAVESEWPELVPFMLRCFEASDIRVQETSLFLFGLLSETLGGKLSCEPDKLQS 182
Query: 444 MLISAL 461
+ + L
Sbjct: 183 LFLKCL 188
>UniRef50_Q6C1P3 Cluster: Similar to sp|P32337 Saccharomyces
cerevisiae YMR308c PSE1 beta karyopherin; n=1; Yarrowia
lipolytica|Rep: Similar to sp|P32337 Saccharomyces
cerevisiae YMR308c PSE1 beta karyopherin - Yarrowia
lipolytica (Candida lipolytica)
Length = 1091
Score = 33.5 bits (73), Expect = 4.4
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 282 DDDGNNQWPEFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNRQTEN 425
D++ WP+ +Q +F A I+E+ R+ +VP V Q N
Sbjct: 130 DENTQGSWPQLVQTLFEGTQAPSGGIRESCFRLIATVPTVLNENQDIN 177
>UniRef50_P32337 Cluster: Importin beta-3 subunit; n=10;
Saccharomycetales|Rep: Importin beta-3 subunit -
Saccharomyces cerevisiae (Baker's yeast)
Length = 1089
Score = 33.5 bits (73), Expect = 4.4
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 303 WPEFLQFMFTCASAQDPNIKEAGIRMFTSVP 395
WPE LQ + + +PN +E+ R+ T+VP
Sbjct: 137 WPELLQALIESLKSGNPNFRESSFRILTTVP 167
>UniRef50_A7R7P4 Cluster: Chromosome undetermined scaffold_1922, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1922, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 1180
Score = 33.1 bits (72), Expect = 5.8
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 231 LTKKGL*CVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNIKEAGIRMFTSV 392
++KK VSELA + + ++G WP L FMF C + ++EA +F +
Sbjct: 857 ISKKLCDTVSELASSILLENG---WPNLLSFMFQCMTFDSTKLQEAVFLIFAQL 907
>UniRef50_Q5KFR0 Cluster: Importin beta-4 subunit, putative; n=2;
Filobasidiella neoformans|Rep: Importin beta-4 subunit,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 1080
Score = 32.7 bits (71), Expect = 7.7
Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Frame = +3
Query: 300 QWPEFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLD-VIKGMLISALQPNES 476
QWP + ++ A + D +E I + S+ +L + K +S + P ES
Sbjct: 126 QWPTLMPGLYQAAGSADKAHRETAIYVLFSILDTVAESFESHLQSLFKVFSVSLVDP-ES 184
Query: 477 MALRT---QGS*S*GAFILLHDKEPIIQKHFSDVLLPLMQVIVLSIEAADDD 623
+R + +I DK I K F D+++P+++V+ +I+ DD+
Sbjct: 185 AEVRVTTLRALAKVAEYIEPSDKHDI--KAFQDLIVPMLKVLEQAIKDGDDE 234
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,854,290
Number of Sequences: 1657284
Number of extensions: 12040058
Number of successful extensions: 26841
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 26079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26832
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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