Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060712.seq
         (639 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    24   1.2  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    24   1.2  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    24   1.2  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   5.0  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    21   8.7  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   8.7  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   8.7  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 556 CFCMMGSLSCSSIKAPQL*LP 494
           CFC  G+  C +++ PQ+  P
Sbjct: 696 CFCENGNNKCFTMECPQVTCP 716


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/52 (19%), Positives = 28/52 (53%)
 Frame = +1

Query: 277 ILMTMATTSGLSSYSSCLPVPVRKIQTSKKLVLECLRLYQVYLEIVRLKTWM 432
           +++T A      SY+  +   V   +  ++ +L  ++LY +Y +++ + T++
Sbjct: 182 LILTQAIFLMFVSYNIYVCQTVSNFEYFQRKILLMIQLYYLYFDVIVISTFL 233


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/52 (19%), Positives = 28/52 (53%)
 Frame = +1

Query: 277 ILMTMATTSGLSSYSSCLPVPVRKIQTSKKLVLECLRLYQVYLEIVRLKTWM 432
           +++T A      SY+  +   V   +  ++ +L  ++LY +Y +++ + T++
Sbjct: 108 LILTQAIFLMFVSYNIYVCQTVSNFEYFQRKILLMIQLYYLYFDVIVISTFL 159


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 265 WLGIILMTMATTSGLSSYSSCL 330
           W  I+++    TS LSS  +C+
Sbjct: 226 WTLILILAKCITSSLSSLYTCI 247


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 142 RILH*IIFVTARPPFDAHLRQCLH 71
           R+LH +   T   P+DA   QC++
Sbjct: 83  RLLHDLKGRTTSVPYDALTGQCIY 106


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 142 RILH*IIFVTARPPFDAHLRQCLH 71
           R+LH +   T   P+DA   QC++
Sbjct: 83  RLLHDLKGRTTSVPYDALTGQCIY 106


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 142 RILH*IIFVTARPPFDAHLRQCLH 71
           R+LH +   T   P+DA   QC++
Sbjct: 83  RLLHDLKGRTTSVPYDALTGQCIY 106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,486
Number of Sequences: 336
Number of extensions: 3322
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)