Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060711.seq
         (643 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    31   0.008
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    26   0.30 
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   2.8  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   4.9  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   4.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   4.9  
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    21   8.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 31.1 bits (67), Expect = 0.008
 Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
 Frame = +3

Query: 210 FSVCTWFF---FLIAIQILY*IF*LVIYKLWL*FVLCIY 317
           F +CT++F   F+I + + Y  +  +I+ + L F+LCIY
Sbjct: 96  FLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIY 134



 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 453 LPAFPYTINAFILFTL 500
           LP   Y  +AFI+FT+
Sbjct: 209 LPCIYYFYSAFIIFTI 224


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = -1

Query: 553 LIEFSHLSSSHLPRFTVNK---VKRMKALMVYGNA 458
           L EFS+  S HLP+F+      ++R   L V G A
Sbjct: 306 LYEFSNFVSQHLPKFSAANFFDIERSTILSVLGTA 340


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +3

Query: 186 RHLSSCYKFSVCTW 227
           RH + CY  + C+W
Sbjct: 138 RHQAICYPLTYCSW 151


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -1

Query: 103 YGLVTNIEFRILIFLYHKQFSILNNNYI*T 14
           Y +V  +   ++IF+   Q S   NNY+ T
Sbjct: 368 YSIVGAVTTYLVIFIQFDQSSNSRNNYVLT 397


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 383 VASQYFLLLEAMKMKQMVHILLNFTCISIH 472
           V + Y+LL+E      +  ILL    I +H
Sbjct: 283 VVTPYYLLIEVCNAGYLPFILLQVAWIVLH 312


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 333 LHDRNFPGGL 362
           ++DR FPGGL
Sbjct: 454 IYDRGFPGGL 463


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 397 ILRGHLLTHTDLSP 356
           +L+GH+ THT   P
Sbjct: 22  LLQGHIRTHTGEKP 35


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,774
Number of Sequences: 336
Number of extensions: 3801
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)