Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060706.seq
         (640 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.1  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   2.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   3.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   3.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.0  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   6.6  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   6.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 227 FFFLCILFGCMGYFRFSRHIRFL 159
           FF LCI +    +  F+ H+ FL
Sbjct: 141 FFLLCIYYFYCAFIIFTVHLLFL 163



 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +1

Query: 73  CKFYNYLVFKCFFLFRLLVLCKKSFVTCYKKRICL 177
           C +Y Y  F  F +  L +LC   FV      +C+
Sbjct: 112 CVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCI 146


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 158 IKNEYVWRT*SSPYTRR 208
           IKNE +W+     YTR+
Sbjct: 258 IKNEIIWKKLREDYTRQ 274


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 467 QVFVIKEGVQYRIRSILSF 523
           +VF I  G +YR R I SF
Sbjct: 334 EVFTITPGRRYRFRMINSF 352


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 467 QVFVIKEGVQYRIRSILSF 523
           +VF I  G +YR R I SF
Sbjct: 334 EVFTITPGRRYRFRMINSF 352


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +1

Query: 28  VRHFFGLKNLETANRCKFYNYLVFKCFFLFRLLVLCKKSFVT 153
           V+ F   ++L    R  F  + V  C+    L+++ K  FVT
Sbjct: 513 VQRFNNYQSLAHYLRVFFTVFNVVHCYLASELVLMLKNRFVT 554


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 55  NSLDQKNDEPQCFRA 11
           N LD+KND+    RA
Sbjct: 114 NKLDKKNDDSPALRA 128


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 55  NSLDQKNDEPQCFRA 11
           N LD+KND+    RA
Sbjct: 114 NKLDKKNDDSPALRA 128


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 205 KRIQRKKKSNPHISHL 252
           +RIQ+ KK+NP +  L
Sbjct: 149 ERIQKLKKANPSLKTL 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,097
Number of Sequences: 336
Number of extensions: 2785
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)