Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060706.seq
         (640 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061221-1|AAL28769.1|  201|Drosophila melanogaster LD16419p pro...   126   3e-29
AE014296-3251|AAF49090.1|  201|Drosophila melanogaster CG7823-PA...   126   3e-29

>AY061221-1|AAL28769.1|  201|Drosophila melanogaster LD16419p
           protein.
          Length = 201

 Score =  126 bits (303), Expect = 3e-29
 Identities = 69/127 (54%), Positives = 81/127 (63%)
 Frame = +2

Query: 245 ATSKKTIEEILAADQEDESLRKYKEALLGQAQAGAVIVEPDDPRKVIVKKLALCVVGRXX 424
           A  +KTIEEI+AADQEDESLR+YKEALLG AQ   +IVEP+DPRKVIVKKLAL V GR  
Sbjct: 24  APPEKTIEEIMAADQEDESLRRYKEALLGAAQTEKIIVEPNDPRKVIVKKLALVVEGRDD 83

Query: 425 XXXXXXXXXXXXKKQVFVIKEGVQYRIRSILSFNARSCTV*STCRRPTDWGVPVDKMTHM 604
                       KKQ+FVIKEGVQY++R                ++ +  GV VDKM HM
Sbjct: 84  MELDLTGDLSQLKKQLFVIKEGVQYKVRIDFIVQREIVHGLKYVQKTSRLGVNVDKMKHM 143

Query: 605 VGFLSPQ 625
           VG   P+
Sbjct: 144 VGSYPPK 150


>AE014296-3251|AAF49090.1|  201|Drosophila melanogaster CG7823-PA
           protein.
          Length = 201

 Score =  126 bits (303), Expect = 3e-29
 Identities = 69/127 (54%), Positives = 81/127 (63%)
 Frame = +2

Query: 245 ATSKKTIEEILAADQEDESLRKYKEALLGQAQAGAVIVEPDDPRKVIVKKLALCVVGRXX 424
           A  +KTIEEI+AADQEDESLR+YKEALLG AQ   +IVEP+DPRKVIVKKLAL V GR  
Sbjct: 24  APPEKTIEEIMAADQEDESLRRYKEALLGAAQTEKIIVEPNDPRKVIVKKLALVVEGRDD 83

Query: 425 XXXXXXXXXXXXKKQVFVIKEGVQYRIRSILSFNARSCTV*STCRRPTDWGVPVDKMTHM 604
                       KKQ+FVIKEGVQY++R                ++ +  GV VDKM HM
Sbjct: 84  MELDLTGDLSQLKKQLFVIKEGVQYKVRIDFIVQREIVHGLKYVQKTSRLGVNVDKMKHM 143

Query: 605 VGFLSPQ 625
           VG   P+
Sbjct: 144 VGSYPPK 150


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,785,242
Number of Sequences: 53049
Number of extensions: 491804
Number of successful extensions: 929
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)