Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060705.seq
         (439 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z97056-3|CAB09792.1|  650|Homo sapiens DEAD (Asp-Glu-Ala-Asp) bo...    29   5.3  
U59321-1|AAC50787.1|  650|Homo sapiens DEAD-box protein p72 prot...    29   5.3  
CR456432-1|CAG30318.1|  652|Homo sapiens DDX17 protein.                29   5.3  
BC000595-1|AAH00595.2|  729|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ...    29   5.3  
AB209595-1|BAD92832.1|  737|Homo sapiens DEAD box polypeptide 17...    29   5.3  

>Z97056-3|CAB09792.1|  650|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
           polypeptide 17 protein.
          Length = 650

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 353 QNMRRPDWXSVSLXPFXKNFYXPHPXVLK 439
           + +R+  W    L  F KNFY  HP V +
Sbjct: 36  ERLRKKKWDLSELPKFEKNFYVEHPEVAR 64


>U59321-1|AAC50787.1|  650|Homo sapiens DEAD-box protein p72
           protein.
          Length = 650

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 353 QNMRRPDWXSVSLXPFXKNFYXPHPXVLK 439
           + +R+  W    L  F KNFY  HP V +
Sbjct: 36  ERLRKKKWDLSELPKFEKNFYVEHPEVAR 64


>CR456432-1|CAG30318.1|  652|Homo sapiens DDX17 protein.
          Length = 652

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 353 QNMRRPDWXSVSLXPFXKNFYXPHPXVLK 439
           + +R+  W    L  F KNFY  HP V +
Sbjct: 36  ERLRKKKWDLSELPKFEKNFYVEHPEVAR 64


>BC000595-1|AAH00595.2|  729|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
           polypeptide 17 protein.
          Length = 729

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 353 QNMRRPDWXSVSLXPFXKNFYXPHPXVLK 439
           + +R+  W    L  F KNFY  HP V +
Sbjct: 115 ERLRKKKWDLSELPKFEKNFYVEHPEVAR 143


>AB209595-1|BAD92832.1|  737|Homo sapiens DEAD box polypeptide 17
           isoform p82 variant protein.
          Length = 737

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 353 QNMRRPDWXSVSLXPFXKNFYXPHPXVLK 439
           + +R+  W    L  F KNFY  HP V +
Sbjct: 117 ERLRKKKWDLSELPKFEKNFYVEHPEVAR 145


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,173,714
Number of Sequences: 237096
Number of extensions: 563742
Number of successful extensions: 906
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3545165828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)