Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060705.seq
         (439 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY102660-1|AAM27489.1|  818|Drosophila melanogaster GH10652p pro...    29   2.1  
AE014296-1163|AAF50635.2|  818|Drosophila melanogaster CG10077-P...    29   2.1  
AY060404-1|AAL25443.1|  945|Drosophila melanogaster LD32873p pro...    28   4.8  
AE014298-1087|AAF46295.1|  945|Drosophila melanogaster CG10777-P...    28   4.8  

>AY102660-1|AAM27489.1|  818|Drosophila melanogaster GH10652p
           protein.
          Length = 818

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +2

Query: 374 WXSVSLXPFXKNFYXPHPXVL 436
           W  V+L PF KNFY P   VL
Sbjct: 109 WSEVNLTPFRKNFYKPCDSVL 129


>AE014296-1163|AAF50635.2|  818|Drosophila melanogaster CG10077-PA,
           isoform A protein.
          Length = 818

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +2

Query: 374 WXSVSLXPFXKNFYXPHPXVL 436
           W  V+L PF KNFY P   VL
Sbjct: 109 WSEVNLTPFRKNFYKPCDSVL 129


>AY060404-1|AAL25443.1|  945|Drosophila melanogaster LD32873p
           protein.
          Length = 945

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 353 QNMRRPDWXSVSLXPFXKNFYXPHPXVL 436
           +N+ +P W +  L PF K+FY  HP  L
Sbjct: 184 RNLVKPKWEN--LEPFLKDFYNIHPNTL 209


>AE014298-1087|AAF46295.1|  945|Drosophila melanogaster CG10777-PB
           protein.
          Length = 945

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 353 QNMRRPDWXSVSLXPFXKNFYXPHPXVL 436
           +N+ +P W +  L PF K+FY  HP  L
Sbjct: 184 RNLVKPKWEN--LEPFLKDFYNIHPNTL 209


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,750,427
Number of Sequences: 53049
Number of extensions: 176249
Number of successful extensions: 671
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1396986582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)