Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060702.seq
(636 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 69 1e-10
UniRef50_Q9AY32 Cluster: RRNA intron-encoded homing endonuclease... 64 4e-09
UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus lu... 60 3e-08
UniRef50_A5BKB8 Cluster: Putative uncharacterized protein; n=2; ... 53 7e-06
UniRef50_Q4W1E6 Cluster: LPS-binding protein; n=1; Suberites dom... 46 6e-04
UniRef50_Q4TH85 Cluster: Chromosome undetermined SCAF3131, whole... 42 0.009
UniRef50_UPI0000F2EBE8 Cluster: PREDICTED: similar to Ac1147; n=... 42 0.012
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;... 39 0.12
UniRef50_UPI0000F2EB7B Cluster: PREDICTED: similar to splicing c... 39 0.12
UniRef50_Q6CQE3 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 39 0.12
UniRef50_A5X2G8 Cluster: Transposase; n=2; Zea mays|Rep: Transpo... 36 0.62
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513... 36 0.62
UniRef50_A6NFT1 Cluster: Uncharacterized protein ENSP00000366514... 34 3.3
>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 79
Score = 68.5 bits (160), Expect = 1e-10
Identities = 33/40 (82%), Positives = 33/40 (82%)
Frame = +1
Query: 49 MARRAASGKPKILDSGGSMVAKLKLKGIDGRAPPGVEPAA 168
M A GKPK L SGGSMVAKLKLKGIDGRAPPGVEPAA
Sbjct: 40 MTSLAPYGKPKFLGSGGSMVAKLKLKGIDGRAPPGVEPAA 79
>UniRef50_Q9AY32 Cluster: RRNA intron-encoded homing endonuclease;
n=4; Eukaryota|Rep: RRNA intron-encoded homing
endonuclease - Oryza sativa (Rice)
Length = 66
Score = 63.7 bits (148), Expect = 4e-09
Identities = 33/46 (71%), Positives = 34/46 (73%)
Frame = +1
Query: 31 SADVTTMARRAASGKPKILDSGGSMVAKLKLKGIDGRAPPGVEPAA 168
SADV A K K L SGGSMVA+LKLKGIDGRAPPGVEPAA
Sbjct: 21 SADVAYRTPPAPYEKSKSLGSGGSMVARLKLKGIDGRAPPGVEPAA 66
>UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 72
Score = 60.5 bits (140), Expect = 3e-08
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = +1
Query: 73 KPKILDSGGSMVAKLKLKGIDGRAPPGVEPAA 168
K K L SGGSMVA+LKLKGIDGRAPPGVEPAA
Sbjct: 41 KSKFLGSGGSMVARLKLKGIDGRAPPGVEPAA 72
>UniRef50_A5BKB8 Cluster: Putative uncharacterized protein; n=2;
Eukaryota|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 347
Score = 52.8 bits (121), Expect = 7e-06
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +1
Query: 250 GCGAWPFLVGGAICLVNSGNERDSSLL 330
G GAWPFLVGGAICLVNS NERD SLL
Sbjct: 2 GGGAWPFLVGGAICLVNSVNERDLSLL 28
>UniRef50_Q4W1E6 Cluster: LPS-binding protein; n=1; Suberites
domuncula|Rep: LPS-binding protein - Suberites domuncula
(Sponge)
Length = 451
Score = 46.4 bits (105), Expect = 6e-04
Identities = 34/68 (50%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +2
Query: 275 LVERFVWLIPVTNETLAC*IGVVI*VCAASCRATH*RRIKILLRG-TGVFEPHEIEQ*QV 451
LVE FVWLIP+TNETL C G+V T LLRG TG + Q QV
Sbjct: 2 LVEGFVWLIPITNETLTC--GLV----------TPFLNGGRLLRGTTGSEASGSLRQLQV 49
Query: 452 CDALRCPG 475
CDALRC G
Sbjct: 50 CDALRCSG 57
>UniRef50_Q4TH85 Cluster: Chromosome undetermined SCAF3131, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF3131,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 36
Score = 42.3 bits (95), Expect = 0.009
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +3
Query: 60 GSFRETKDFGLRGEYGCKAET 122
GS RETK FG RGEYGCKAET
Sbjct: 16 GSVRETKVFGFRGEYGCKAET 36
>UniRef50_UPI0000F2EBE8 Cluster: PREDICTED: similar to Ac1147; n=1;
Monodelphis domestica|Rep: PREDICTED: similar to Ac1147
- Monodelphis domestica
Length = 510
Score = 41.9 bits (94), Expect = 0.012
Identities = 20/34 (58%), Positives = 22/34 (64%)
Frame = +2
Query: 512 PWPRGPGNPLKLLRAGDWGLXLSPINEEFLVSAS 613
P P G GNPL +R GD GL L P+NEEF V S
Sbjct: 21 PTPAGAGNPLNPIRDGDRGLQLFPMNEEFPVKDS 54
>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 493
Score = 38.7 bits (86), Expect = 0.12
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -2
Query: 254 HPPNQERAVNLSILPVSGPG 195
HP N+ERA+NLSIL VSGPG
Sbjct: 4 HPQNRERAINLSILSVSGPG 23
>UniRef50_UPI0000F2EB7B Cluster: PREDICTED: similar to splicing
coactivator subunit SRm300; n=1; Monodelphis
domestica|Rep: PREDICTED: similar to splicing
coactivator subunit SRm300 - Monodelphis domestica
Length = 598
Score = 38.7 bits (86), Expect = 0.12
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -2
Query: 254 HPPNQERAVNLSILPVSGPG 195
HP N+ERA+NLSIL VSGPG
Sbjct: 4 HPQNRERAINLSILSVSGPG 23
>UniRef50_Q6CQE3 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome D of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=3; Eukaryota|Rep: Kluyveromyces lactis strain
NRRL Y-1140 chromosome D of strain NRRL Y- 1140 of
Kluyveromyces lactis - Kluyveromyces lactis (Yeast)
(Candida sphaerica)
Length = 119
Score = 38.7 bits (86), Expect = 0.12
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = -2
Query: 296 TRQIAPPTKNGHAPHPPNQERAVNLSILP 210
+RQI PPTKNGHAP PP + R + S+ P
Sbjct: 86 SRQITPPTKNGHAP-PPTKSRKSSQSVNP 113
Score = 35.9 bits (79), Expect = 0.82
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = -3
Query: 505 ADSFSVARVRPRTSKGITD 449
A S SVARVRPRTSKGITD
Sbjct: 28 AGSVSVARVRPRTSKGITD 46
>UniRef50_A5X2G8 Cluster: Transposase; n=2; Zea mays|Rep:
Transposase - Zea mays (Maize)
Length = 738
Score = 36.3 bits (80), Expect = 0.62
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = -2
Query: 134 SIPLSFSFATILPPESKIFGFPEAARRAIVVTSAD 30
+IPL +SFA IL P +K+ GF RR + +TS D
Sbjct: 505 NIPLLYSFAFILDPRAKMKGFSRVLRRLMNLTSTD 539
>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY05130 - Plasmodium yoelii yoelii
Length = 402
Score = 36.3 bits (80), Expect = 0.62
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = -3
Query: 283 LHQLRTAMHHTHRIKKELLICQSFRCPGLVRFPVLSQIKPQAPLL 149
+H+L+TAMHH R ++ + FPVLSQIKPQAP L
Sbjct: 177 IHELKTAMHHHPRNQERAINL----------FPVLSQIKPQAPRL 211
>UniRef50_A6NFT1 Cluster: Uncharacterized protein ENSP00000366514;
n=39; Fungi/Metazoa group|Rep: Uncharacterized protein
ENSP00000366514 - Homo sapiens (Human)
Length = 95
Score = 33.9 bits (74), Expect = 3.3
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 491 TEGISMSPWPRGPGNPLKLLRAGDWGLXLSP 583
T + SP P G G L +R GDWGL L P
Sbjct: 65 TGSVCASPTPAGAGKLLNPIRDGDWGLQLFP 95
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 685,248,854
Number of Sequences: 1657284
Number of extensions: 15308790
Number of successful extensions: 40408
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 38212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40387
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47296372782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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