Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060702.seq
(636 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 24 0.92
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 24 0.92
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 24 0.92
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 24 0.92
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 22 3.7
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 21 6.5
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 21 8.6
AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 21 8.6
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 21 8.6
AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 21 8.6
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 21 8.6
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 24.2 bits (50), Expect = 0.92
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = +3
Query: 222 QINSSFLIRWVWCMAVLSWWSDLSG*FR 305
++ S+ + W+WC+ W L FR
Sbjct: 122 KLPSAERVAWMWCLIFAFWVPQLGSLFR 149
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 24.2 bits (50), Expect = 0.92
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = +3
Query: 222 QINSSFLIRWVWCMAVLSWWSDLSG*FR 305
++ S+ + W+WC+ W L FR
Sbjct: 122 KLPSAERVAWMWCLIFAFWVPQLGSLFR 149
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 24.2 bits (50), Expect = 0.92
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = +3
Query: 222 QINSSFLIRWVWCMAVLSWWSDLSG*FR 305
++ S+ + W+WC+ W L FR
Sbjct: 122 KLPSAERVAWMWCLIFAFWVPQLGSLFR 149
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 24.2 bits (50), Expect = 0.92
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = +3
Query: 222 QINSSFLIRWVWCMAVLSWWSDLSG*FR 305
++ S+ + W+WC+ W L FR
Sbjct: 122 KLPSAERVAWMWCLIFAFWVPQLGSLFR 149
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 22.2 bits (45), Expect = 3.7
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = -3
Query: 559 PSTKEFQRVARASRPGRHADSFSVARVRPRTS 464
PS+ R R +PG + + RPRT+
Sbjct: 203 PSSGRSPRTRRVKKPGAKQGAPTAEEKRPRTA 234
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 21.4 bits (43), Expect = 6.5
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3
Query: 310 RYRN*PDKSLHQLRT 266
R RN PD S H LR+
Sbjct: 53 RLRNVPDNSFHFLRS 67
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = -1
Query: 522 LGQGDMLIPSV*RACGPG 469
+G G L P CGPG
Sbjct: 378 MGMGPSLTPLASPGCGPG 395
>AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle
nuclear receptor protein.
Length = 407
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = -2
Query: 278 PTKNGHAPHPPNQERAVNLSILPVSG 201
P K+ +P+PPN + + + + G
Sbjct: 65 PNKSSTSPYPPNHPLSGSKHLCSICG 90
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/38 (21%), Positives = 19/38 (50%)
Frame = -3
Query: 241 KKELLICQSFRCPGLVRFPVLSQIKPQAPLLVVPFRQF 128
K L + ++ G+++FP+ + + L +PF +
Sbjct: 50 KTPLPLTLLYKLLGIIQFPISAHFSFMSRFLCLPFYSY 87
>AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor
candidate 14 protein.
Length = 374
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/38 (21%), Positives = 19/38 (50%)
Frame = -3
Query: 241 KKELLICQSFRCPGLVRFPVLSQIKPQAPLLVVPFRQF 128
K L + ++ G+++FP+ + + L +PF +
Sbjct: 6 KTPLPLTLLYKLLGIIQFPISAHFSFMSRFLCLPFYSY 43
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = -1
Query: 522 LGQGDMLIPSV*RACGPG 469
+G G L P CGPG
Sbjct: 378 MGMGPSLTPLASPGCGPG 395
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,276
Number of Sequences: 336
Number of extensions: 3480
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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