Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060699.seq
(644 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 2e-21
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 1e-15
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 56 2e-08
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 56 2e-08
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 44 8e-05
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 42 4e-04
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 41 7e-04
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 40 0.001
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 39 0.003
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 39 0.003
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 38 0.005
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 38 0.009
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 37 0.016
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 37 0.016
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.021
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 36 0.037
SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.049
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 35 0.049
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.065
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 33 0.20
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 33 0.26
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.26
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.61
SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061) 31 0.61
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.80
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21) 30 1.9
SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) 29 2.4
SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 29 2.4
SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012) 29 3.2
SB_25592| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 28 5.7
SB_27872| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 7.5
SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039) 28 7.5
SB_27857| Best HMM Match : Cadherin (HMM E-Value=0) 27 9.9
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 27 9.9
SB_27882| Best HMM Match : Cob_adeno_trans (HMM E-Value=3.6) 27 9.9
SB_154| Best HMM Match : RVT_1 (HMM E-Value=0.00044) 27 9.9
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 99 bits (238), Expect = 2e-21
Identities = 50/84 (59%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Frame = +1
Query: 256 FLAGGISAAVSKTAVAPIERVKLLXQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSF 432
F G +A +SKTA APIERVKLL Q Q + K D YKG++D R + +G LSF
Sbjct: 13 FGLSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEGFLSF 72
Query: 433 WRGNFANVIRYFPTQALNFAFKDK 504
WRGN AN IRYFPTQALNFAFKD+
Sbjct: 73 WRGNLANCIRYFPTQALNFAFKDQ 96
Score = 32.7 bits (71), Expect = 0.26
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +1
Query: 370 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 462
+YKG +D ++I K++G +S +G AN++R
Sbjct: 248 KYKGSIDCTIQILKKEGAMSLMKGAGANILR 278
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 80.6 bits (190), Expect = 1e-15
Identities = 37/85 (43%), Positives = 60/85 (70%)
Frame = +1
Query: 259 LAGGISAAVSKTAVAPIERVKLLXQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 438
LAGGI+ AVS+T+V+P+ERVK+L Q+Q + ++KG++ ++I KE+G+L +++
Sbjct: 39 LAGGIAGAVSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGILGYFK 92
Query: 439 GNFANVIRYFPTQALNFAFKDKYSR 513
GN NVIR FP A+ FA ++Y +
Sbjct: 93 GNGTNVIRIFPYSAVQFAAYEEYKK 117
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 62.5 bits (145), Expect = 3e-10
Identities = 38/102 (37%), Positives = 55/102 (53%)
Frame = +1
Query: 265 GGISAAVSKTAVAPIERVKLLXQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 444
GG A VS+TA AP++R+K+L QVQ A+ GIV F + +E G+ S WRGN
Sbjct: 143 GGALAGVSRTATAPLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGGIKSLWRGN 196
Query: 445 FANVIRYFPTQALNFAFKDKYSRCSSAVLTRRRSSGVTSLVI 570
ANVI+ P + F Y + V + ++ GVT ++
Sbjct: 197 GANVIKIAPESGIKFF---AYEKAKKLVGSDTKALGVTDRLL 235
Score = 37.5 bits (83), Expect = 0.009
Identities = 20/78 (25%), Positives = 43/78 (55%)
Frame = +1
Query: 259 LAGGISAAVSKTAVAPIERVKLLXQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 438
LAG ++ S+T++ P+E +K ++ + Y+G++ A I +++G+ SF+R
Sbjct: 235 LAGSMAGVASQTSIYPLEVLKTRLAIRKTGQ-------YRGLLHAASVIYQKEGIRSFYR 287
Query: 439 GNFANVIRYFPTQALNFA 492
G F +++ P ++ A
Sbjct: 288 GLFPSLLGIIPYAGIDLA 305
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 56.4 bits (130), Expect = 2e-08
Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +1
Query: 256 FLAGGISAAVSKTAVAPIERVKLLXQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSF 432
F G +A +SKTA APIERVKLL Q Q + K YKG+VD +R + +G+ SF
Sbjct: 14 FALSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDCTMRTYRAEGIGSF 73
Query: 433 WR 438
WR
Sbjct: 74 WR 75
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 56.0 bits (129), Expect = 2e-08
Identities = 27/79 (34%), Positives = 45/79 (56%)
Frame = +1
Query: 256 FLAGGISAAVSKTAVAPIERVKLLXQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 435
FL GG SA ++++ +P+E VK+L QV + G++ F + K +G+ +FW
Sbjct: 62 FLCGGTSAVLARSLTSPLEVVKVLAQV-------GTQEAKPGLIRTFASVYKREGIKAFW 114
Query: 436 RGNFANVIRYFPTQALNFA 492
+GN + IR FP A+ +A
Sbjct: 115 KGNGVSCIRLFPYSAVQYA 133
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/71 (33%), Positives = 39/71 (54%)
Frame = +1
Query: 259 LAGGISAAVSKTAVAPIERVKLLXQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 438
LAG S ++ V P E +K VQHV+K ++ YKG+ A I +E+G+L+ ++
Sbjct: 157 LAGTSSTLIAMVTVYPCEVIKTRLTVQHVNK---SNAHYKGMRHALKTILREEGILALYK 213
Query: 439 GNFANVIRYFP 471
G + + FP
Sbjct: 214 GVTPSFLGLFP 224
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 44.4 bits (100), Expect = 8e-05
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Frame = +1
Query: 262 AGGISAAVSKTAVAPIERVKLLXQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 441
AG ++ +AP++ VK+ Q+Q +K+ + Y+G VD V++ + +GL ++G
Sbjct: 39 AGSVAGLAQVPLIAPVDLVKIKLQMQTEAKR-STRSVYRGPVDCLVKLYRSRGLAGCFQG 97
Query: 442 NFANVIRYFPTQALNFA----FKDKYSRC--SSAVLTRRRSSGVTSLVIW 573
N +R P A+ F D +S S V T + G +V W
Sbjct: 98 NTVTAVRDIPGFAVYFGVYELLCDWFSNLFGSRGVATYLMAGGFAGVVSW 147
Score = 37.9 bits (84), Expect = 0.007
Identities = 24/77 (31%), Positives = 40/77 (51%)
Frame = +1
Query: 259 LAGGISAAVSKTAVAPIERVKLLXQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 438
+AGG + VS + P + +K Q + RYKG++D ++ KE+G++ F R
Sbjct: 137 MAGGFAGVVSWASTFPFDVIKSRIQADGNLGKF----RYKGMMDCALQSYKEEGMIVFTR 192
Query: 439 GNFANVIRYFPTQALNF 489
G + ++R F Q L F
Sbjct: 193 GIWPTLLRGF-LQVLRF 208
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = +1
Query: 256 FLAGGISAAVSKTAVAPIERVKLLXQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 435
F +GGI+ +S P++ VK Q + +Y G D +I G+ +F
Sbjct: 361 FFSGGIAGTLSWILTYPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFG 420
Query: 436 RGNFANVIRYFPTQA 480
+G A ++R FPT A
Sbjct: 421 QGLLATILRGFPTNA 435
Score = 27.5 bits (58), Expect = 9.9
Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 10/87 (11%)
Frame = +1
Query: 259 LAGGISAAVSKTAVAPIERVKLLXQVQHVSKQIA----------ADQRYKGIVDAFVRIP 408
++G I+ V P+E K QVQ +++ Y G +D ++
Sbjct: 249 ISGAIAGGVQSIVCCPMELAKTRVQVQGQGQKLVHVFFLTNTETKQMAYTGSLDCLKKVF 308
Query: 409 KEQGLLSFWRGNFANVIRYFPTQALNF 489
+GL +RG R P AL F
Sbjct: 309 HSEGLRGCFRGMAITTTRDIPAFALYF 335
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 41.1 bits (92), Expect = 7e-04
Identities = 24/89 (26%), Positives = 39/89 (43%)
Frame = +1
Query: 256 FLAGGISAAVSKTAVAPIERVKLLXQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 435
F A IS + A P++ K Q + I YKG +D RI + +G+ + W
Sbjct: 97 FGASMISGLATTVASMPVDIAKTRIQNMRI---IDGKPEYKGTMDVLARIVRNEGVFALW 153
Query: 436 RGNFANVIRYFPTQALNFAFKDKYSRCSS 522
+G R P L F F ++ +R ++
Sbjct: 154 KGFTPYYFRIGPHTVLTFIFLEQLNRAAN 182
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +1
Query: 373 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYSRCSSAVLTRR 540
Y + +A R+ KE+G+L+ WRG +R A A YS+ +L+ +
Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLA---TYSQAKQLLLSTK 87
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = +1
Query: 271 ISAAVSKTAVAPIERVKLLXQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 450
I A TAV PI+ VK Q Q + A++ YK +D F ++ + +G + +RG
Sbjct: 922 IKKATGATAVYPIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLP 979
Query: 451 NVIRYFPTQALNFAFKD 501
++ P +A+ D
Sbjct: 980 QLLGVSPEKAIKLTTND 996
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 253 GFLAGGISAAVSKTAVAPIERVKLLXQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL-LS 429
GF+ GG++ AVS+T P++ V+ Q ++ + +Y ++ V + K+ G+
Sbjct: 175 GFVCGGVAGAVSQTIAYPLDVVRRRMQ---LAGAVPDGHKYNTCINTLVNVYKDDGIRRG 231
Query: 430 FWRGNFANVIRYFPTQALNF 489
+RG N +R P A+ F
Sbjct: 232 LYRGLSINYLRVCPQVAIMF 251
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/44 (36%), Positives = 29/44 (65%)
Frame = +1
Query: 382 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYSR 513
++ AF I + +GLL++++GN A ++R FP A+ F + YS+
Sbjct: 13 VLTAFRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSK 56
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1
Query: 259 LAGGISAAVSKTAVAPIERVKLLXQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 438
L G S ++ V P E +K VQHV+K A YKG+ A I +E+G+L+ ++
Sbjct: 426 LVGTSSTLIAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYK 482
Query: 439 G 441
G
Sbjct: 483 G 483
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 38.3 bits (85), Expect = 0.005
Identities = 13/48 (27%), Positives = 29/48 (60%)
Frame = +1
Query: 370 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYSR 513
+Y G+ +I +++GL +++GN N++R P A+ FA +++ +
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +1
Query: 265 GGISAAVSKTAVAPIERVKLLXQVQ---HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 435
G +S +SK + P + +K QVQ + Q+Y G+ D F I KE+G + +
Sbjct: 36 GALSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCFRTILKEEGAMGLF 95
Query: 436 RG 441
+G
Sbjct: 96 KG 97
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +1
Query: 355 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYSRCSSA 525
I ++Y G+++AF RI +++G+ +F+RG +I P ++F Y C A
Sbjct: 19 ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFF---TYETCKKA 72
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 36.7 bits (81), Expect = 0.016
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +1
Query: 259 LAGGISAAVSKTAVA-PIERVKLLXQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 435
+ G+S+ V +A+A P + VK+ Q + + I YK + AF +I K++G L W
Sbjct: 118 IVAGVSSGVIGSAIATPTDLVKIRFQAVKIGETIP----YKNMFHAFYKIAKKEGFLGLW 173
Query: 436 RG 441
G
Sbjct: 174 TG 175
Score = 31.1 bits (67), Expect = 0.80
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Frame = +1
Query: 163 AATPTSTYSPSEDHI--IEQNVEPRRSGRVR*GFLAGGISAAVSKTAVA-PIERVKLLXQ 333
AA + T P+ DH + N E R G LA + A T VA P++ V+
Sbjct: 183 AACISGTQIPTYDHTKHLLLNAELMREGVAL--HLASALVAGFVATCVASPVDIVRTRFM 240
Query: 334 VQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 462
Q + Y+G +D + + +G+L+ ++G F N R
Sbjct: 241 TQPKDTK-GRPLVYQGTLDCIYKTVRHEGILALYKGFFPNWTR 282
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 36.7 bits (81), Expect = 0.016
Identities = 21/92 (22%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Frame = +1
Query: 256 FLAGGISAAVSKTAVAPIERVKLLXQVQHVSKQIAA---------DQRYKGIVDAFVRIP 408
F + GI+A++++ A PI+ K+ Q+Q S +A+ D Y+G++ V +
Sbjct: 18 FCSAGIAASIAEAATIPIDTAKVRLQIQGESAVMASIAQGVRTTHDAHYRGMLGTMVTLF 77
Query: 409 KEQGLLSFWRGNFANVIRYFPTQALNFAFKDK 504
K +G+ + ++G + R ++ D+
Sbjct: 78 KTEGMKTMYKGLIPGIHRQLCFASIRIGLYDQ 109
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 36.3 bits (80), Expect = 0.021
Identities = 19/77 (24%), Positives = 39/77 (50%)
Frame = +1
Query: 259 LAGGISAAVSKTAVAPIERVKLLXQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 438
+AG +S + A P++ +K+ Q + K +KG +D F++ + +GL ++
Sbjct: 25 IAGSVSGMLGCAAGQPLDLLKVRLQAMNQVKP-GETAPFKGAMDCFMKTVRLEGLRGLYK 83
Query: 439 GNFANVIRYFPTQALNF 489
G + ++ P+ AL F
Sbjct: 84 GMLSPLLMATPSTALTF 100
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 35.5 bits (78), Expect = 0.037
Identities = 22/80 (27%), Positives = 40/80 (50%)
Frame = +1
Query: 253 GFLAGGISAAVSKTAVAPIERVKLLXQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSF 432
GFLAGG ++ V +T P++ ++ Q + Q + KG + G F
Sbjct: 108 GFLAGGCASIVGQTITVPVD---IISQKLMIQGQGDRKVKLKGARILIRETFHQHGPGGF 164
Query: 433 WRGNFANVIRYFPTQALNFA 492
++G FA+++ Y P+ A+ +A
Sbjct: 165 YKGYFASLMTYAPSSAIWWA 184
>SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1829
Score = 35.1 bits (77), Expect = 0.049
Identities = 22/82 (26%), Positives = 37/82 (45%)
Frame = -3
Query: 588 RHHRRPDYQRSNARTASSCQHRRGTPAVLVLEGEVERLGREVPDDVGEVTTPE*KETLLL 409
+HH +P + A + + RR +V++ E+ RL EVP + G K+ +
Sbjct: 664 KHHFKPKLSEAGASLYFNSRIRRSNESVVMYVAELRRL--EVPCNFGGFLNRALKDRFIA 721
Query: 408 GDTDEGIDDTLVTLVGGDLLAD 343
G D I +++ GDL D
Sbjct: 722 GINDAEIQQKILSTPDGDLTFD 743
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 35.1 bits (77), Expect = 0.049
Identities = 27/95 (28%), Positives = 43/95 (45%)
Frame = +1
Query: 157 ACAATPTSTYSPSEDHIIEQNVEPRRSGRVR*GFLAGGISAAVSKTAVAPIERVKLLXQV 336
A T S YS S ++ + +P + + + AG AP ERVK L QV
Sbjct: 132 AAPVTAVSFYSLSIGKRLQLS-DPNKEPTMVQYYNAGVFCGVCVSFIYAPTERVKCLLQV 190
Query: 337 QHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 441
Q K+ RY+G+ D +++ + GL ++G
Sbjct: 191 Q---KESGTKARYQGLGDCLLQVYRTGGLRGVFKG 222
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 34.7 bits (76), Expect = 0.065
Identities = 19/72 (26%), Positives = 38/72 (52%)
Frame = +1
Query: 256 FLAGGISAAVSKTAVAPIERVKLLXQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 435
F++G + V+ + P++ V+ VQ +S + ++ Y GIV A RI E+G+ +
Sbjct: 32 FVSGATAGVVATASTHPLDVVRARLTVQDMSTRSISN--YTGIVSALRRIHIEEGIRGLY 89
Query: 436 RGNFANVIRYFP 471
+G +++ P
Sbjct: 90 KGLVPSLVSIAP 101
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 385 VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDK 504
+DA ++IP+ +GL S WRG ++ P + F D+
Sbjct: 64 IDALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQ 103
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 33.9 bits (74), Expect = 0.11
Identities = 23/78 (29%), Positives = 36/78 (46%)
Frame = +1
Query: 259 LAGGISAAVSKTAVAPIERVKLLXQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 438
LAGGI+ + P E VK Q+ + AA Y+G +D + K G+L +R
Sbjct: 45 LAGGIAGGLEICCTFPTEYVKTQLQLD----EKAAKPIYRGPIDCVKKTVKGHGVLGLYR 100
Query: 439 GNFANVIRYFPTQALNFA 492
G + + P ++ FA
Sbjct: 101 GLSSLLYGSVPKASVRFA 118
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 33.1 bits (72), Expect = 0.20
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +1
Query: 304 PIERVKLLXQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 483
PI+ K QVQ + Q A +Y+ + A I + G+ ++G A ++R P
Sbjct: 221 PIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVRNIPANGF 280
Query: 484 NFAF 495
F F
Sbjct: 281 FFGF 284
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/70 (25%), Positives = 35/70 (50%)
Frame = +1
Query: 262 AGGISAAVSKTAVAPIERVKLLXQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 441
AG ++ + AV P++ +K Q+ + + + Y GI+D +I +GL +F++G
Sbjct: 211 AGCLAGMTASVAVNPLDVIKTRLQLLNRPQ---GEPNYNGIIDCAKKIYSNEGLAAFYKG 267
Query: 442 NFANVIRYFP 471
+I P
Sbjct: 268 AVPRMIVIAP 277
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 32.7 bits (71), Expect = 0.26
Identities = 23/102 (22%), Positives = 43/102 (42%)
Frame = +1
Query: 184 YSPSEDHIIEQNVEPRRSGRVR*GFLAGGISAAVSKTAVAPIERVKLLXQVQHVSKQIAA 363
Y + +++ + + RR V LA GIS ++ + P E + + Q +
Sbjct: 911 YERLKAELLKLHYKSRRDFHVVECMLAAGISKCIATSLCYPHEVARTRLRQQE--SEFLG 968
Query: 364 DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 489
Q+Y+ + +E+G + G +VIR P A+ F
Sbjct: 969 RQKYRSFFQTLGTVLREEGWRGLYGGLGTHVIRQVPNTAIMF 1010
>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 32.3 bits (70), Expect = 0.35
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +1
Query: 403 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYSRCSSAVLTRRRSSG 552
+P+E +L W G ++VI F A+N F+D+Y + +L R R SG
Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYKK----LLRRMRRSG 184
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 31.5 bits (68), Expect = 0.61
Identities = 17/78 (21%), Positives = 34/78 (43%)
Frame = +1
Query: 259 LAGGISAAVSKTAVAPIERVKLLXQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 438
+AG + A + P++ +K+ Q + K YK D F +I + +G+ +R
Sbjct: 43 IAGSAAGAAANLVGFPLDTIKVRLQAMPLPKP-GEPWMYKNSFDCFFKIIRNEGVYYLFR 101
Query: 439 GNFANVIRYFPTQALNFA 492
G ++ P + F+
Sbjct: 102 GVTVPILNSIPNTTVLFS 119
>SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061)
Length = 114
Score = 31.5 bits (68), Expect = 0.61
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +1
Query: 268 GISAAVSKTAVAPIERVKLLXQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 438
G+S +KT AP+ER+K+L Q Q+ + + A I K++GL +++
Sbjct: 63 GLSTCCAKTTTAPLERLKILFQAQN------KHYKNMSVFGALKAIYKKEGLQGYYK 113
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 31.1 bits (67), Expect = 0.80
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +1
Query: 259 LAGGISAAVSKTAVAPIERVKLLXQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 438
LAG + A+ PIE +K Q+ Y+G++ + KE+G+ +F+R
Sbjct: 2 LAGACATVFHDGAMNPIEVIKQRLQMY--------GSPYRGVIHCATSVFKEEGIRAFYR 53
Query: 439 GNFANVIRYFPTQALNFAFKDKYSR 513
+ P Q L+F + Y+R
Sbjct: 54 SYTTQLSMNIPFQTLHFTVYE-YAR 77
>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 31.1 bits (67), Expect = 0.80
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 403 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYSR 513
+P+E L W G F++VI F A+N AF+++Y +
Sbjct: 272 LPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKK 308
>SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -3
Query: 630 RSRGGTRSTERWLRRHHRRPDYQRSNARTAS-SCQHRRGTPAVL 502
RS+ +R++ RWL R R+P S+ R++S SC G P VL
Sbjct: 13 RSQVRSRNSNRWLLRQQRQPQRHLSHKRSSSNSCS--PGDPLVL 54
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +1
Query: 262 AGGISAAVSKTAVAPIERVKLLXQVQHVSKQIAADQRYK-GIVDAFVRIPKEQGLLSFWR 438
AG +A + P E +K Q QH + I+ K G++D ++I + G +R
Sbjct: 112 AGSGAAFFMSFVLCPAELIKCRLQAQHQTNLISGMAGPKSGVIDVTMQIIRNDGFQGLFR 171
Query: 439 GNFANVIRYFP 471
G A R P
Sbjct: 172 GMTATWAREVP 182
>SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21)
Length = 198
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 262 AGGISAAVSKTAVAPIERVKLLXQ 333
AGG++ S+T AP+E++K++ Q
Sbjct: 175 AGGVAGVASRTLTAPLEKMKIIAQ 198
>SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 324 AXPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 425
A S RQQ R RP +GY +R R YP+ SP
Sbjct: 83 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 117
>SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 324 AXPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 425
A S RQQ R RP +GY +R R YP+ SP
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 217
>SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)
Length = 553
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1
Query: 286 SKTAVAPIERVKLLXQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 444
S+ VA ER +L Q Q +D RY+G +D+F + +G L +RG+
Sbjct: 278 SRQTVACPERCGVLMASQGKRGQYMSDARYRGHLDSFRGDARYRGHLDSFRGD 330
>SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 404
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 324 AXPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 425
A S RQQ R RP +GY +R R YP+ SP
Sbjct: 261 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 295
>SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012)
Length = 550
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 324 AXPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 425
A S RQQ R RP GY +R R YP+ SP
Sbjct: 84 ASGSNQRQQQARGRPQASGYNQRSRRGYPRARASP 118
>SB_25592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -3
Query: 492 GEVERLGREVPDDVGEVTTPE*KETLLLGD 403
GE +R+G+ + + G +TTPE K+ L GD
Sbjct: 105 GERQRVGQHLEQNEGWITTPELKDLLDSGD 134
>SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 406
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 324 AXPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 425
A S RQQ R RP +GY +R R YP+ +P
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARATP 217
>SB_27872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 415 QGLLSFWRGNFANVIRYFPTQALNFAFKDKYSRCSSAVLTRRRSS 549
Q LLS +A+ I Y+P LN +D +S R+RSS
Sbjct: 412 QFLLSIADSLYADAIHYWPLDQLNITLRDSPLPHASLKTLRKRSS 456
>SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 792
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +1
Query: 52 ISKKAHTYPLCSRDYEITPNLLFKNQELV----FRDPPSACAATPTSTYSPS 195
++ ++ Y C + E +P + + ++D SAC A P TY PS
Sbjct: 106 LTDESELYGYCQSNGEWSPAMYTSRHRCMCHAGYQDTVSACTACPRGTYKPS 157
>SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039)
Length = 54
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = +1
Query: 379 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYSR 513
G+V + G +RGN A ++R P ++ F ++Y +
Sbjct: 1 GVVHVLTQTYTTNGFTGLFRGNSATMMRVVPYASIQFTSHEQYKK 45
>SB_27857| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2418
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +1
Query: 100 ITPN----LLFKNQELVFRDPPSACAATPTSTYSPSEDHII 210
+TPN LL + + R+P SA S YSPSE I+
Sbjct: 963 LTPNVRYQLLIRASDSATRNPSSAQVPVYVSVYSPSESPIV 1003
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -3
Query: 630 RSRGGTRSTERWLRRHHR-RPDYQRSNARTASSCQHRRGTP 511
R +GG R+T+ ++H R +PD +R+ R R+GTP
Sbjct: 872 RHKGGNRATQEREKKHRRNQPDKRRTQMRIP-----RKGTP 907
>SB_27882| Best HMM Match : Cob_adeno_trans (HMM E-Value=3.6)
Length = 822
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3
Query: 480 RLGREVPDDVGEVTTPE*KETLLLGD 403
R+G+ + + G +TTPE K+ L LGD
Sbjct: 525 RVGQHLEQNEGWITTPELKDLLDLGD 550
>SB_154| Best HMM Match : RVT_1 (HMM E-Value=0.00044)
Length = 1170
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +1
Query: 79 LCSRDYEITPNLLFKN---QELVFRDPPSACAATPTSTYSPSED 201
LC +D E++P LLF N +++ R P A P++ S ED
Sbjct: 54 LCGKDQEVSPKLLFGNDLAKQVRDRKKPPVW-ANPSAPQSAKED 96
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,449,209
Number of Sequences: 59808
Number of extensions: 396931
Number of successful extensions: 1415
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1402
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1633044375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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