Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060699.seq
(644 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 155 3e-40
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 155 3e-40
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 3.3
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 3.3
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 4.4
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 155 bits (376), Expect = 3e-40
Identities = 69/86 (80%), Positives = 79/86 (91%)
Frame = +1
Query: 256 FLAGGISAAVSKTAVAPIERVKLLXQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 435
FLAGG++AA+SKT VAPIERVKLL QVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+W
Sbjct: 14 FLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYW 73
Query: 436 RGNFANVIRYFPTQALNFAFKDKYSR 513
RGN ANVIRYFPTQALNFAFKDKY +
Sbjct: 74 RGNLANVIRYFPTQALNFAFKDKYKQ 99
Score = 50.8 bits (116), Expect = 1e-08
Identities = 24/38 (63%), Positives = 24/38 (63%)
Frame = +3
Query: 531 DKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRL 644
DK TQF RYF TSLCFVYPLDFARTRL
Sbjct: 106 DKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRL 143
Score = 26.2 bits (55), Expect = 0.27
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = +1
Query: 304 PIERVKLLXQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 462
P + V+ +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 25.4 bits (53), Expect = 0.47
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2
Query: 218 MSNLADPVAFAK 253
MS LADPVAFAK
Sbjct: 1 MSGLADPVAFAK 12
Score = 25.4 bits (53), Expect = 0.47
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +1
Query: 262 AGGISAAVSKTAVAPIE--RVKLLXQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 435
+GG + A S V P++ R +L V + ++ + G+ + +I K G+ +
Sbjct: 121 SGGAAGATSLCFVYPLDFARTRLAADVG----KAGGEREFTGLGNCLTKIFKADGITGLY 176
Query: 436 RGNFANVIRYFPTQALNFAFKD 501
RG +V +A F F D
Sbjct: 177 RGFGVSVQGIIIYRAAYFGFYD 198
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 155 bits (376), Expect = 3e-40
Identities = 69/86 (80%), Positives = 79/86 (91%)
Frame = +1
Query: 256 FLAGGISAAVSKTAVAPIERVKLLXQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 435
FLAGG++AA+SKT VAPIERVKLL QVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+W
Sbjct: 14 FLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYW 73
Query: 436 RGNFANVIRYFPTQALNFAFKDKYSR 513
RGN ANVIRYFPTQALNFAFKDKY +
Sbjct: 74 RGNLANVIRYFPTQALNFAFKDKYKQ 99
Score = 50.8 bits (116), Expect = 1e-08
Identities = 24/38 (63%), Positives = 24/38 (63%)
Frame = +3
Query: 531 DKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRL 644
DK TQF RYF TSLCFVYPLDFARTRL
Sbjct: 106 DKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRL 143
Score = 26.2 bits (55), Expect = 0.27
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = +1
Query: 304 PIERVKLLXQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 462
P + V+ +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 25.4 bits (53), Expect = 0.47
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2
Query: 218 MSNLADPVAFAK 253
MS LADPVAFAK
Sbjct: 1 MSGLADPVAFAK 12
Score = 25.4 bits (53), Expect = 0.47
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +1
Query: 262 AGGISAAVSKTAVAPIE--RVKLLXQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 435
+GG + A S V P++ R +L V + ++ + G+ + +I K G+ +
Sbjct: 121 SGGAAGATSLCFVYPLDFARTRLAADVG----KAGGEREFTGLGNCLTKIFKADGITGLY 176
Query: 436 RGNFANVIRYFPTQALNFAFKD 501
RG +V +A F F D
Sbjct: 177 RGFGVSVQGIIIYRAAYFGFYD 198
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.6 bits (46), Expect = 3.3
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 483 ERLGREVPDDVGEVTTPE 430
ER RE+PDD+ + P+
Sbjct: 553 ERANRELPDDLRQKVLPD 570
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.6 bits (46), Expect = 3.3
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 483 ERLGREVPDDVGEVTTPE 430
ER RE+PDD+ + P+
Sbjct: 553 ERANRELPDDLRQKVLPD 570
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.2 bits (45), Expect = 4.4
Identities = 15/67 (22%), Positives = 25/67 (37%)
Frame = -3
Query: 630 RSRGGTRSTERWLRRHHRRPDYQRSNARTASSCQHRRGTPAVLVLEGEVERLGREVPDDV 451
R+ R+ ++ + P+ RS A C++ R TP + + E P
Sbjct: 1301 RAMTEARNQQQQASSQQQIPESMRSKALIDQLCRNSRRTPVPRLAQDSSEDESYRGPSAS 1360
Query: 450 GEVTTPE 430
G PE
Sbjct: 1361 GGRPVPE 1367
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,226
Number of Sequences: 438
Number of extensions: 3444
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -