Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060696.seq
         (619 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    79   9e-17
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    26   1.1  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   2.0  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   3.4  
AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding pr...    23   7.9  
AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding pr...    23   7.9  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    23   7.9  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 79.4 bits (187), Expect = 9e-17
 Identities = 36/77 (46%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
 Frame = +2

Query: 14  LEIHTRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAH 193
           L+ H RTHTGE+PF+C  C      K  L  H RIHTGE+PY+CD+C  RF   + + AH
Sbjct: 227 LKRHIRTHTGEKPFQCPHCTYASPDKFKLTRHMRIHTGEKPYSCDVCFARFTQSNSLKAH 286

Query: 194 RWSH-VADKPL-NCDRC 238
           +  H V +KP+  C  C
Sbjct: 287 KMIHQVGNKPVFQCKLC 303



 Score = 60.1 bits (139), Expect = 6e-11
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
 Frame = +2

Query: 14  LEIHTRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAH 193
           L  H +TH+ +RP +C VC + F   ++L  H   HTG +P+ C  C   F     +  H
Sbjct: 142 LSRHLKTHSEDRPHKCVVCERGFKTLASLQNHVNTHTGTKPHRCKHCDNCFTTSGELIRH 201

Query: 194 -RWSHVADKPLNCDRC 238
            R+ H  ++P  C  C
Sbjct: 202 IRYRHTHERPHKCTEC 217



 Score = 59.7 bits (138), Expect = 7e-11
 Identities = 27/68 (39%), Positives = 34/68 (50%)
 Frame = +2

Query: 35  HTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSHVAD 214
           HT ERP +C  C     + S L  H R HTGE+P+ C  C      K  +T H   H  +
Sbjct: 206 HTHERPHKCTECDYASVELSKLKRHIRTHTGEKPFQCPHCTYASPDKFKLTRHMRIHTGE 265

Query: 215 KPLNCDRC 238
           KP +CD C
Sbjct: 266 KPYSCDVC 273



 Score = 57.6 bits (133), Expect = 3e-10
 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
 Frame = +2

Query: 14  LEIHTRT-HTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTA 190
           L IH +  HT ++P +C  C   F  + +  +H + H GE+ Y C+ C        ++ +
Sbjct: 313 LRIHVQNLHTADKPIKCKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPYASISMRHLES 372

Query: 191 HRWSHVADKPLNCDRC 238
           H   H   KP  CD+C
Sbjct: 373 HLLLHTDQKPYKCDQC 388



 Score = 50.0 bits (114), Expect = 6e-08
 Identities = 19/59 (32%), Positives = 30/59 (50%)
 Frame = +2

Query: 17  EIHTRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAH 193
           ++H +TH GE+ + C+ C         L  H  +HT ++PY CD C + F  K  +  H
Sbjct: 343 KMHAKTHEGEKCYRCEYCPYASISMRHLESHLLLHTDQKPYKCDQCAQTFRQKQLLKRH 401



 Score = 43.2 bits (97), Expect = 7e-06
 Identities = 19/71 (26%), Positives = 34/71 (47%)
 Frame = +2

Query: 26  TRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSH 205
           T+  TG   + C+ C     +   L+ H + H+ +RP+ C +C++ F   + +  H  +H
Sbjct: 119 TQQSTGST-YMCNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCERGFKTLASLQNHVNTH 177

Query: 206 VADKPLNCDRC 238
              KP  C  C
Sbjct: 178 TGTKPHRCKHC 188



 Score = 41.1 bits (92), Expect = 3e-05
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
 Frame = +2

Query: 8   RYLEIHTRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTG---------ERPYACDICQK 160
           R+LE H   HT ++P++CD C + F QK  L  H   +            + + C  C++
Sbjct: 368 RHLESHLLLHTDQKPYKCDQCAQTFRQKQLLKRHMNYYHNPDYVAPTPKAKTHICPTCKR 427

Query: 161 RFAVKSYVTAHRWSH 205
            F  K  +  H   H
Sbjct: 428 PFRHKGNLIRHMAMH 442



 Score = 28.7 bits (61), Expect = 0.16
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +1

Query: 274 HIRTHAAGSCYECSVCGRSFVRDSYLIRHHNRVHRDNH 387
           H+  H     Y+C  C ++F +   L RH N  H  ++
Sbjct: 373 HLLLHTDQKPYKCDQCAQTFRQKQLLKRHMNYYHNPDY 410



 Score = 28.3 bits (60), Expect = 0.21
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +1

Query: 256 KSQFALHIRTHAAGSCYECSVCGRSFVRDSYLIRHHNRVHR 378
           K +   H+R H     Y C VC   F + + L + H  +H+
Sbjct: 252 KFKLTRHMRIHTGEKPYSCDVCFARFTQSNSL-KAHKMIHQ 291



 Score = 28.3 bits (60), Expect = 0.21
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +1

Query: 265 FALHIRTHAAGSCYECSVCGRSFVRDSYLIRHHNRVHRD 381
           + +H +TH    CY C  C  + +   +L   H  +H D
Sbjct: 342 YKMHAKTHEGEKCYRCEYCPYASISMRHL-ESHLLLHTD 379



 Score = 27.9 bits (59), Expect = 0.28
 Identities = 12/40 (30%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
 Frame = +1

Query: 274 HIRTHAAGSCYECSVCGRSFVRDSYLIRH--HNRVHRDNH 387
           H+ TH     + C  C   F     LIRH  +   H   H
Sbjct: 173 HVNTHTGTKPHRCKHCDNCFTTSGELIRHIRYRHTHERPH 212



 Score = 27.5 bits (58), Expect = 0.37
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +1

Query: 259 SQFALHIRTHAAGSCYECSVCGRSFVRDSYLIRHHNRVH 375
           S+   HIRTH     ++C  C  +   D + +  H R+H
Sbjct: 225 SKLKRHIRTHTGEKPFQCPHCTYA-SPDKFKLTRHMRIH 262



 Score = 26.6 bits (56), Expect = 0.64
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 274 HIRTHAAGSCYECSVCGRSFVRDSYLIRHHN 366
           H++TH+    ++C VC R F   + L  H N
Sbjct: 145 HLKTHSEDRPHKCVVCERGFKTLASLQNHVN 175


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +2

Query: 17  EIHTRTHTGERPFECDVCYKRFTQKSTLNIHKR-IH 121
           E+H R        +C +C+K F+Q+    +H R IH
Sbjct: 370 EVH-RISNENFGIKCTICHKLFSQRQDYQLHMRAIH 404



 Score = 24.6 bits (51), Expect = 2.6
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +1

Query: 295 GSCYECSVCGRSFVRDSYLIRHHNRVHRDNHSN 393
           G  ++C++C  S+       +H   VHR ++ N
Sbjct: 346 GQRFQCNLCDMSYRTKLQYQKHEYEVHRISNEN 378


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
            transcription factor FRU-MA protein.
          Length = 960

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +2

Query: 23   HTRTHTGERPFECDVCYKRFTQKSTLNIHKRI 118
            H   H  +   EC VC ++FT++  +  H ++
Sbjct: 914  HANIHRPQS-HECPVCGQKFTRRDNMKAHCKV 944



 Score = 24.6 bits (51), Expect = 2.6
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +1

Query: 274 HIRTHAAGSCYECSVCGRSFVRDSYLIRH 360
           H   H   S +EC VCG+ F R   +  H
Sbjct: 914 HANIHRPQS-HECPVCGQKFTRRDNMKAH 941


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 553 WVSCMDT*VPCDVMYXSPSE 494
           W +  DT VP DV Y S S+
Sbjct: 527 WTAISDTGVPVDVKYNSHSQ 546


>AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding
           protein AgamOBP52 protein.
          Length = 170

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 102 LSVDFCVKRL*QTSH 58
           L++D CVKRL +T H
Sbjct: 107 LAIDECVKRLRKTRH 121


>AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding
           protein OBPjj5a protein.
          Length = 272

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 102 LSVDFCVKRL*QTSH 58
           L++D CVKRL +T H
Sbjct: 209 LAIDECVKRLRKTRH 223


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 66  SVTNASHRNRRSTYTSAFIPVNVLTRVIFA 155
           S+ N +H NRR      FIP  +   ++FA
Sbjct: 541 SLVNHNHFNRRVNILLEFIPQMMFLVLLFA 570


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 528,075
Number of Sequences: 2352
Number of extensions: 9479
Number of successful extensions: 69
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)