BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060696.seq
(619 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 87 1e-19
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 83 2e-18
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 53 3e-09
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 47 2e-07
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 33 0.002
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 33 0.003
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 30 0.021
AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein. 23 2.4
AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta... 23 2.4
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 23 3.2
AB264332-1|BAF44087.1| 58|Apis mellifera ecdysone-induced prot... 21 9.6
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 9.6
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 87.0 bits (206), Expect = 1e-19
Identities = 32/72 (44%), Positives = 46/72 (63%)
Frame = +2
Query: 23 HTRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWS 202
H RTHTGE+P++C+ C K F+ K L++H+RIHT ERPY CD+C++ F + H
Sbjct: 110 HYRTHTGEKPYQCEYCSKSFSVKENLSVHRRIHTKERPYKCDVCERAFEHSGKLHRHMRI 169
Query: 203 HVADKPLNCDRC 238
H ++P C C
Sbjct: 170 HTGERPHKCTVC 181
Score = 86.2 bits (204), Expect = 2e-19
Identities = 36/75 (48%), Positives = 41/75 (54%)
Frame = +2
Query: 14 LEIHTRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAH 193
L H R HTGERP +C VC K F Q L IH R HTGE+PY C C K F + H
Sbjct: 163 LHRHMRIHTGERPHKCTVCSKTFIQSGQLVIHMRTHTGEKPYVCKACGKGFTCSKQLKVH 222
Query: 194 RWSHVADKPLNCDRC 238
+H +KP CD C
Sbjct: 223 TRTHTGEKPYTCDIC 237
Score = 86.2 bits (204), Expect = 2e-19
Identities = 35/75 (46%), Positives = 43/75 (57%)
Frame = +2
Query: 14 LEIHTRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAH 193
L IH RTHTGE+P+ C C K FT L +H R HTGE+PY CDIC K F + H
Sbjct: 191 LVIHMRTHTGEKPYVCKACGKGFTCSKQLKVHTRTHTGEKPYTCDICGKSFGYNHVLKLH 250
Query: 194 RWSHVADKPLNCDRC 238
+ +H +K C C
Sbjct: 251 QVAHYGEKVYKCTLC 265
Score = 85.0 bits (201), Expect = 5e-19
Identities = 33/75 (44%), Positives = 43/75 (57%)
Frame = +2
Query: 14 LEIHTRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAH 193
L +H R HT ERP++CDVC + F L+ H RIHTGERP+ C +C K F + H
Sbjct: 135 LSVHRRIHTKERPYKCDVCERAFEHSGKLHRHMRIHTGERPHKCTVCSKTFIQSGQLVIH 194
Query: 194 RWSHVADKPLNCDRC 238
+H +KP C C
Sbjct: 195 MRTHTGEKPYVCKAC 209
Score = 79.4 bits (187), Expect = 3e-17
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Frame = +2
Query: 23 HTRTH--TGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHR 196
H R+H GE P+ C++C K F + L H R HTGE+PY C+ C K F+VK ++ HR
Sbjct: 80 HLRSHGKEGEDPYRCNICGKTFAVPARLTRHYRTHTGEKPYQCEYCSKSFSVKENLSVHR 139
Query: 197 WSHVADKPLNCDRC 238
H ++P CD C
Sbjct: 140 RIHTKERPYKCDVC 153
Score = 71.7 bits (168), Expect = 5e-15
Identities = 27/67 (40%), Positives = 41/67 (61%)
Frame = +2
Query: 5 TRYLEIHTRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYV 184
++ L++HTRTHTGE+P+ CD+C K F L +H+ H GE+ Y C +C + F K +
Sbjct: 216 SKQLKVHTRTHTGEKPYTCDICGKSFGYNHVLKLHQVAHYGEKVYKCTLCHETFGSKKTM 275
Query: 185 TAHRWSH 205
H +H
Sbjct: 276 ELHIKTH 282
Score = 66.1 bits (154), Expect = 3e-13
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = +2
Query: 32 THTGERPFECDVCYKRFTQKSTLNIHKRIH--TGERPYACDICQKRFAVKSYVTAHRWSH 205
T+ E+ ++C +C K F QK+ H R H GE PY C+IC K FAV + +T H +H
Sbjct: 55 TNIEEKTYQCLLCQKAFDQKNLYQSHLRSHGKEGEDPYRCNICGKTFAVPARLTRHYRTH 114
Query: 206 VADKPLNCDRC 238
+KP C+ C
Sbjct: 115 TGEKPYQCEYC 125
Score = 38.3 bits (85), Expect = 6e-05
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = +2
Query: 14 LEIHTRTHTGERPFECDVCYKRFTQKSTLNIHKRIHT 124
L++H H GE+ ++C +C++ F K T+ +H + H+
Sbjct: 247 LKLHQVAHYGEKVYKCTLCHETFGSKKTMELHIKTHS 283
Score = 34.3 bits (75), Expect = 0.001
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +1
Query: 262 QFALHIRTHAAGSCYECSVCGRSFVRDSYLIRHHNRVH 375
Q +H+RTH Y C CG+ F L + H R H
Sbjct: 190 QLVIHMRTHTGEKPYVCKACGKGFTCSKQL-KVHTRTH 226
Score = 33.9 bits (74), Expect = 0.001
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 253 VKSQFALHIRTHAAGSCYECSVCGRSFVRDSYLIRHHNRVH 375
VK ++H R H Y+C VC R+F L R H R+H
Sbjct: 131 VKENLSVHRRIHTKERPYKCDVCERAFEHSGKLHR-HMRIH 170
Score = 33.1 bits (72), Expect = 0.002
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 262 QFALHIRTHAAGSCYECSVCGRSFVRDSYLIRHHNRVH 375
Q +H RTH Y C +CG+SF +++++ H H
Sbjct: 218 QLKVHTRTHTGEKPYTCDICGKSF-GYNHVLKLHQVAH 254
Score = 32.3 bits (70), Expect = 0.004
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 253 VKSQFALHIRTHAAGSCYECSVCGRSF-VRDSYLIRHHNRVH 375
V ++ H RTH Y+C C +SF V+++ + H R+H
Sbjct: 103 VPARLTRHYRTHTGEKPYQCEYCSKSFSVKENLSV--HRRIH 142
Score = 31.9 bits (69), Expect = 0.005
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +1
Query: 256 KSQFALHIRTHA--AGSCYECSVCGRSFVRDSYLIRHHNRVH 375
K+ + H+R+H Y C++CG++F + L RH+ R H
Sbjct: 74 KNLYQSHLRSHGKEGEDPYRCNICGKTFAVPARLTRHY-RTH 114
Score = 30.3 bits (65), Expect = 0.016
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +1
Query: 274 HIRTHAAGSCYECSVCGRSFVRDSYLIRH 360
H+R H ++C+VC ++F++ L+ H
Sbjct: 166 HMRIHTGERPHKCTVCSKTFIQSGQLVIH 194
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 83.4 bits (197), Expect = 2e-18
Identities = 32/70 (45%), Positives = 44/70 (62%)
Frame = +2
Query: 29 RTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSHV 208
RTHTGE+PFEC C+KRFT+ L H R+HTGE+PY C C ++F + + H H
Sbjct: 2 RTHTGEKPFECPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVHT 61
Query: 209 ADKPLNCDRC 238
++P C+ C
Sbjct: 62 GERPYACELC 71
Score = 69.3 bits (162), Expect = 3e-14
Identities = 25/48 (52%), Positives = 35/48 (72%)
Frame = +2
Query: 11 YLEIHTRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDIC 154
+L+ H R HTGE+P+ C C ++F Q + L H R+HTGERPYAC++C
Sbjct: 24 HLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVHTGERPYACELC 71
Score = 48.0 bits (109), Expect = 7e-08
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +2
Query: 110 KRIHTGERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCDRC 238
+R HTGE+P+ C C KRF ++ H H +KP +C C
Sbjct: 1 ERTHTGEKPFECPECHKRFTRDHHLKTHMRLHTGEKPYHCSHC 43
Score = 33.9 bits (74), Expect = 0.001
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +1
Query: 244 DVHVKSQFALHIRTHAAGSCYECSVCGRSFVRDSYLIRHHNRVH 375
D H+K+ H+R H Y CS C R FV+ + L R H RVH
Sbjct: 22 DHHLKT----HMRLHTGEKPYHCSHCDRQFVQVANL-RRHLRVH 60
Score = 30.7 bits (66), Expect = 0.012
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 280 RTHAAGSCYECSVCGRSFVRDSYLIRHHNRVH 375
RTH +EC C + F RD +L + H R+H
Sbjct: 2 RTHTGEKPFECPECHKRFTRDHHL-KTHMRLH 32
Score = 21.0 bits (42), Expect = 9.6
Identities = 6/16 (37%), Positives = 8/16 (50%)
Frame = +1
Query: 274 HIRTHAAGSCYECSVC 321
H+R H Y C +C
Sbjct: 56 HLRVHTGERPYACELC 71
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 52.8 bits (121), Expect = 3e-09
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +2
Query: 14 LEIHTRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFA 169
L++H RTHT P +C +C K F++ L H R HTGE+P++C C + FA
Sbjct: 32 LKMHIRTHT--LPCKCHLCGKAFSRPWLLQGHIRTHTGEKPFSCQHCNRAFA 81
Score = 46.4 bits (105), Expect = 2e-07
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = +2
Query: 44 ERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSHVADKPL 223
++ F C C K + L +H R HT P C +C K F+ + H +H +KP
Sbjct: 14 KKSFSCKYCEKVYVSLGALKMHIRTHT--LPCKCHLCGKAFSRPWLLQGHIRTHTGEKPF 71
Query: 224 NCDRC 238
+C C
Sbjct: 72 SCQHC 76
Score = 26.2 bits (55), Expect = 0.26
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 274 HIRTHAAGSCYECSVCGRSF 333
HIRTH + C C R+F
Sbjct: 61 HIRTHTGEKPFSCQHCNRAF 80
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 46.8 bits (106), Expect = 2e-07
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +2
Query: 11 YLEIHTRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDIC 154
+LE H R H G +PF+C+ C KS LN H + H+ Y C C
Sbjct: 3 HLEYHLRNHFGSKPFKCEKCSYSCVNKSMLNSHLKSHSNVYQYRCANC 50
Score = 34.3 bits (75), Expect = 0.001
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = +2
Query: 89 KSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCDRC 238
K L H R H G +P+ C+ C KS + +H SH C C
Sbjct: 1 KHHLEYHLRNHFGSKPFKCEKCSYSCVNKSMLNSHLKSHSNVYQYRCANC 50
Score = 27.1 bits (57), Expect = 0.15
Identities = 13/50 (26%), Positives = 21/50 (42%)
Frame = +1
Query: 256 KSQFALHIRTHAAGSCYECSVCGRSFVRDSYLIRHHNRVHRDNHSNMSAN 405
K H+R H ++C C S V S ++ H + H + + AN
Sbjct: 1 KHHLEYHLRNHFGSKPFKCEKCSYSCVNKS-MLNSHLKSHSNVYQYRCAN 49
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 33.5 bits (73), Expect = 0.002
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 50 PFECDVCYKRFTQKSTLNIH--KRIHTGERPYACDICQKRFAVKSYVTAHR 196
P EC C + F+ +L H + + Y C+ C +R+ K+ +T H+
Sbjct: 5 PQECPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTHK 55
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/25 (32%), Positives = 11/25 (44%)
Frame = +1
Query: 304 YECSVCGRSFVRDSYLIRHHNRVHR 378
Y C C R + + L H + HR
Sbjct: 36 YVCEFCNRRYRTKNSLTTHKSLQHR 60
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 32.7 bits (71), Expect = 0.003
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +2
Query: 38 TGERPFECDVCYKRFTQKSTLNIHKRIHTGERP--YACDICQKRFAVKSYVTAHRWSHVA 211
+ ++ F C +C K K++L H ER Y C IC++ + ++ + H +++
Sbjct: 1 SAKKLFTCQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTHIYTYHK 60
Query: 212 DKPLNCD 232
+P + D
Sbjct: 61 SRPGDID 67
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/36 (22%), Positives = 17/36 (47%)
Frame = +2
Query: 44 ERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDI 151
+ + C +C + + +++L H + RP DI
Sbjct: 33 QEEYRCVICERVYCSRNSLMTHIYTYHKSRPGDIDI 68
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 29.9 bits (64), Expect = 0.021
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +1
Query: 271 LHIRTHAAGSCYECSVCGRSFVRDSYLIRHHNRVH 375
LH G CY C VCG++ L RH + H
Sbjct: 361 LHGNLLPPGVCYTCDVCGKTLSTKLTLKRHKEQQH 395
Score = 29.1 bits (62), Expect = 0.036
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +2
Query: 53 FECDVCYKRFTQKSTLNIHKRIHTGE--RPYACDICQKRFAVKSYVTAHR 196
+ CDVC K + K TL HK + C +C K F + + H+
Sbjct: 372 YTCDVCGKTLSTKLTLKRHKEQQHFQPLNSAVCALCHKVFRTLNSLNNHK 421
Score = 24.2 bits (50), Expect = 1.0
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 59 CDVCYKRFTQKSTLNIHKRIH 121
C +C+K F ++LN HK I+
Sbjct: 404 CALCHKVFRTLNSLNNHKSIY 424
>AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein.
Length = 145
Score = 23.0 bits (47), Expect = 2.4
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +1
Query: 295 GSCYECSVCGRSFVRDSYLIRHH 363
G EC C S++++ ++ HH
Sbjct: 86 GFSKECYCCRESYLKERHITLHH 108
>AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta
protein precursor protein.
Length = 145
Score = 23.0 bits (47), Expect = 2.4
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +1
Query: 295 GSCYECSVCGRSFVRDSYLIRHH 363
G EC C S++++ ++ HH
Sbjct: 86 GFSKECYCCRESYLKERHITLHH 108
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 22.6 bits (46), Expect = 3.2
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +2
Query: 20 IHTRTHTGERPFECDVCYKRFTQKSTLNIHKRIH 121
+HTR + P C++C + ++ ++L HK I+
Sbjct: 25 VHTRP--SKEPI-CNICKRVYSSLNSLRNHKSIY 55
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = +1
Query: 310 CSVCGRSFVRDSYLIRHHNRVHRDNHSN 393
C++C R + + L H + HR + N
Sbjct: 35 CNICKRVYSSLNSLRNHKSIYHRQHSKN 62
>AB264332-1|BAF44087.1| 58|Apis mellifera ecdysone-induced protein
75 protein.
Length = 58
Score = 21.0 bits (42), Expect = 9.6
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 202 PRGGQASELRPMLDDVHVKSQFALHIRTHAAGSCY 306
PRG A E +P D + S+ + + +A CY
Sbjct: 8 PRGSSAEEQQPSGDILSPSSEPLDNDKEQSAQVCY 42
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.0 bits (42), Expect = 9.6
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 202 PRGGQASELRPMLDDVHVKSQFALHIRTHAAGSCY 306
PRG A E +P D + S+ + + +A CY
Sbjct: 8 PRGSSAEEQQPSGDILSPSSEPLDNDKEQSAQVCY 42
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,813
Number of Sequences: 438
Number of extensions: 2742
Number of successful extensions: 46
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -