Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060696.seq
(619 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 54 6e-08
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 47 9e-06
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 43 2e-04
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 38 0.007
At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein ... 37 0.009
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 37 0.012
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 36 0.016
At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 36 0.016
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 36 0.022
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 36 0.022
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 35 0.038
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 35 0.038
At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein ... 35 0.038
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 35 0.038
At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein ... 34 0.066
At2g41940.1 68415.m05188 zinc finger (C2H2 type) family protein ... 34 0.066
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 34 0.066
At3g23140.1 68416.m02916 zinc finger (C2H2 type) family protein ... 33 0.11
At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein ... 33 0.11
At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3... 33 0.20
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 33 0.20
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 33 0.20
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 33 0.20
At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein ... 32 0.26
At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1... 32 0.35
At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein ... 32 0.35
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 31 0.46
At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein ... 31 0.61
At5g06650.1 68418.m00751 zinc finger (C2H2 type) family protein ... 31 0.61
At5g01860.1 68418.m00105 zinc finger (C2H2 type) family protein ... 31 0.61
At1g68360.1 68414.m07808 zinc finger protein-related similar to ... 31 0.61
At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein ... 31 0.61
At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein ... 31 0.81
At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein ... 31 0.81
At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein ... 30 1.1
At1g04445.1 68414.m00436 zinc finger (C2H2 type) family protein ... 30 1.1
At5g40310.1 68418.m04890 exonuclease family protein contains exo... 30 1.4
At5g08720.1 68418.m01036 expressed protein 30 1.4
At3g58070.1 68416.m06473 zinc finger (C2H2 type) family protein ... 30 1.4
At5g04340.1 68418.m00426 zinc finger (C2H2 type) family protein ... 24 1.4
At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein ... 29 1.9
At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein ... 29 1.9
At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein ... 29 2.5
At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zin... 29 2.5
At4g12240.1 68417.m01941 zinc finger (C2H2 type) family protein ... 29 3.3
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 29 3.3
At5g60410.2 68418.m07579 DNA-binding family protein contains Pfa... 28 4.3
At5g60410.1 68418.m07578 DNA-binding family protein contains Pfa... 28 4.3
At5g43540.1 68418.m05323 zinc finger (C2H2 type) family protein ... 28 4.3
At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein ... 28 4.3
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 28 4.3
At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2... 28 5.7
At2g43200.1 68415.m05369 dehydration-responsive family protein s... 28 5.7
At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein ... 28 5.7
At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein ... 28 5.7
At1g68480.1 68414.m07823 zinc finger (C2H2 type) family protein ... 27 7.5
At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein ... 27 7.5
At1g13400.1 68414.m01562 zinc finger (C2H2 type) family protein ... 27 10.0
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 54.4 bits (125), Expect = 6e-08
Identities = 29/67 (43%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +2
Query: 8 RYLEIHTRTHTGERPFECD--VCYKRFTQKSTLNIHKRIHTGERPYAC--DICQKRFAVK 175
+YL +H R H ERPFEC C F + H R+HTGERPY C D C F
Sbjct: 1253 KYLVLHQRVHKDERPFECSWKGCSMTFKWQWARTEHLRLHTGERPYICKVDGCGLSFRFV 1312
Query: 176 SYVTAHR 196
S + HR
Sbjct: 1313 SDYSRHR 1319
Score = 37.5 bits (83), Expect = 0.007
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +2
Query: 68 CYKRFTQKSTLNIHKRIHTGERPYACDI--CQKRFAVKSYVTAHRWSHVADKPLNC 229
C K+F L +H+R+H ERP+ C C F + T H H ++P C
Sbjct: 1245 CGKKFRAHKYLVLHQRVHKDERPFECSWKGCSMTFKWQWARTEHLRLHTGERPYIC 1300
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 47.2 bits (107), Expect = 9e-06
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +2
Query: 14 LEIHTRTHTGERPFECDV--CYKRFTQKSTLNIHKRIHTGERPYAC--DICQKRFAVKSY 181
L H+ H GER + CD C K+F S L H IHTGER Y C + C K F++
Sbjct: 96 LRKHSHIH-GERQYVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFN 154
Query: 182 VTAHRWSH 205
+ +H +H
Sbjct: 155 LRSHMKTH 162
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +2
Query: 8 RYLEIHTRTHTGERPFECDV--CYKRFTQKSTLNIHKRIHTGERPYAC--DICQKRFAVK 175
+YL H R H+ +RP +C C F + H R+HTG RPY C C + F
Sbjct: 1275 KYLVQHQRVHSDDRPLKCPWKGCKMTFKWAWSRTEHIRVHTGARPYVCAEPDCGQTFRFV 1334
Query: 176 SYVTAHR 196
S + H+
Sbjct: 1335 SDFSRHK 1341
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Frame = +2
Query: 68 CYKRFTQKSTLNIHKRIHTGERPYACDI--CQKRFAVKSYVTAHRWSHVADKPLNC 229
C K F L H+R+H+ +RP C C+ F T H H +P C
Sbjct: 1267 CGKNFFSHKYLVQHQRVHSDDRPLKCPWKGCKMTFKWAWSRTEHIRVHTGARPYVC 1322
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 37.5 bits (83), Expect = 0.007
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +2
Query: 26 TRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHR 196
+R H GE+ ++CD C K++ S H +I G + Y CD C F+ K HR
Sbjct: 137 SRKH-GEKKWKCDKCSKKYAVMSDWKAHSKI-CGTKEYRCD-CGTLFSRKDSFITHR 190
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +2
Query: 125 GERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCD 232
GE+ + CD C K++AV S AH K CD
Sbjct: 141 GEKKWKCDKCSKKYAVMSDWKAHS-KICGTKEYRCD 175
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 53 FECDVCYKRFTQKSTLNIHKRIH 121
F C+VC K F + L +H+R H
Sbjct: 68 FICEVCNKGFKRDQNLQLHRRGH 90
>At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 392
Score = 37.1 bits (82), Expect = 0.009
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +2
Query: 26 TRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHR 196
+R H GE+ ++CD C K++ S H +I G R + CD C F+ K +HR
Sbjct: 75 SRKH-GEKKWKCDKCSKKYAVISDWKAHNKI-CGSREFRCD-CGTLFSRKDSFISHR 128
Score = 29.1 bits (62), Expect = 2.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 53 FECDVCYKRFTQKSTLNIHKRIH 121
F C++C K F ++ L +HKR H
Sbjct: 6 FFCEICNKGFQREQNLQLHKRGH 28
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 125 GERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCD 232
GE+ + CD C K++AV S AH + CD
Sbjct: 79 GEKKWKCDKCSKKYAVISDWKAHN-KICGSREFRCD 113
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 36.7 bits (81), Expect = 0.012
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +2
Query: 29 RTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHR 196
R H GE+ ++CD C K++ +S H +I G + Y CD C F+ + HR
Sbjct: 132 RKH-GEKKWKCDKCSKKYAVQSDWKAHSKI-CGTKEYKCD-CGTLFSRRDSFITHR 184
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 125 GERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCD 232
GE+ + CD C K++AV+S AH K CD
Sbjct: 135 GEKKWKCDKCSKKYAVQSDWKAHS-KICGTKEYKCD 169
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +2
Query: 14 LEIHTRTHTGERPFECDVCYKRFTQKSTLNIHKRIH 121
+ + +T F C++C K F + L +H+R H
Sbjct: 50 IALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGH 85
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 36.3 bits (80), Expect = 0.016
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +2
Query: 23 HTRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHR 196
++R H GE+ ++C+ C K++ +S H + G R Y CD C F+ K HR
Sbjct: 150 YSRKH-GEKKWKCEKCSKKYAVQSDWKAHAKT-CGTREYKCD-CGTLFSRKDSFITHR 204
Score = 27.5 bits (58), Expect = 7.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 53 FECDVCYKRFTQKSTLNIHKRIH 121
F C++C K F + L +H+R H
Sbjct: 82 FVCEICNKGFQRDQNLQLHRRGH 104
>At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3)
identical to WIP3 protein [Arabidopsis thaliana]
gi|18027014|gb|AAL55723; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 36.3 bits (80), Expect = 0.016
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +2
Query: 56 ECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSH 205
+ +VC KRF S +IH G +AC IC K F + + H W H
Sbjct: 157 DVEVCGKRFWIPSPA----QIHVGPMQFACSICSKTFNRYNNMQMHMWGH 202
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +2
Query: 35 HTGERPFECDVCYKRFTQKSTLNIHKRIHTGE 130
H G F C +C K F + + + +H H E
Sbjct: 174 HVGPMQFACSICSKTFNRYNNMQMHMWGHGSE 205
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +2
Query: 95 TLNIHKRIHTGERPYACDICQKRFAVKSYVTAH 193
TL H + G +P++C C K AVK H
Sbjct: 251 TLQTHYKRKHGSKPFSCGKCGKALAVKGDWRTH 283
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 35.9 bits (79), Expect = 0.022
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +2
Query: 29 RTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHR 196
R H GE+ ++CD C KR+ +S H + G + Y CD C F+ + HR
Sbjct: 150 RKH-GEKKWKCDKCSKRYAVQSDWKAHSKT-CGTKEYRCD-CGTLFSRRDSFITHR 202
Score = 31.1 bits (67), Expect = 0.61
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 125 GERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCD 232
GE+ + CD C KR+AV+S AH K CD
Sbjct: 153 GEKKWKCDKCSKRYAVQSDWKAHS-KTCGTKEYRCD 187
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 14 LEIHTRTHTGERPFECDVCYKRFTQKSTLNIHKRIH 121
+ + +T F C+VC K F ++ L +H+R H
Sbjct: 68 IALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGH 103
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 35.9 bits (79), Expect = 0.022
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 29 RTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVK-SYVTAHR 196
R H GE+ ++CD C KR+ +S H + G + Y CD C F+ + SY+T HR
Sbjct: 151 RKH-GEKKWKCDKCSKRYAVQSDWKAHSKT-CGTKEYRCD-CGTIFSRRDSYIT-HR 203
Score = 31.1 bits (67), Expect = 0.61
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 125 GERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCD 232
GE+ + CD C KR+AV+S AH K CD
Sbjct: 154 GEKKWKCDKCSKRYAVQSDWKAHS-KTCGTKEYRCD 188
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 14 LEIHTRTHTGERPFECDVCYKRFTQKSTLNIHKRIH 121
+ + +T F C+VC K F ++ L +H+R H
Sbjct: 69 IALSPKTIMATNRFLCEVCNKGFQREQNLQLHRRGH 104
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 35.1 bits (77), Expect = 0.038
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +2
Query: 29 RTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHR 196
R H GE+ ++C+ C K++ +S H +I G + Y CD C F+ + HR
Sbjct: 130 RKH-GEKKWKCEKCSKKYAVQSDWKAHSKI-CGTKEYKCD-CGTLFSRRDSFITHR 182
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +2
Query: 14 LEIHTRTHTGERPFECDVCYKRFTQKSTLNIHKRIH 121
+ + +T F C++C K F + L +H+R H
Sbjct: 48 IALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGH 83
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 125 GERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCD 232
GE+ + C+ C K++AV+S AH K CD
Sbjct: 133 GEKKWKCEKCSKKYAVQSDWKAHS-KICGTKEYKCD 167
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 35.1 bits (77), Expect = 0.038
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +2
Query: 29 RTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHR 196
R H GE+ ++C+ C K + +S H +I G R Y CD C F+ K HR
Sbjct: 152 RKH-GEKKWKCEKCSKFYAVQSDWKAHTKI-CGTRDYRCD-CGTLFSRKDTFITHR 204
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +2
Query: 14 LEIHTRTHTGERPFECDVCYKRFTQKSTLNIHKRIH 121
+ + +T F C++C K F + L +H+R H
Sbjct: 69 IALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGH 104
>At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein
similar to finger protein pcp1 GB:S48856 from [Solanum
tuberosum] contains Pfam domain, PF00096: Zinc finger,
C2H2 type
Length = 513
Score = 35.1 bits (77), Expect = 0.038
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +2
Query: 29 RTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHR 196
R H GE+ ++CD C K++ +S H + G + Y CD C F+ + HR
Sbjct: 169 RKH-GEKKWKCDKCSKKYAVQSDCKAHSKT-CGTKEYRCD-CGTLFSRRDSFITHR 221
Score = 30.7 bits (66), Expect = 0.81
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 125 GERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCD 232
GE+ + CD C K++AV+S AH K CD
Sbjct: 172 GEKKWKCDKCSKKYAVQSDCKAHS-KTCGTKEYRCD 206
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +2
Query: 14 LEIHTRTHTGERPFECDVCYKRFTQKSTLNIHKRIH 121
+ + +T F C++C K F + L +H+R H
Sbjct: 86 IALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGH 121
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 35.1 bits (77), Expect = 0.038
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +2
Query: 29 RTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHR 196
R H GE+ ++C+ C KR+ +S H + G R Y CD C F+ + HR
Sbjct: 139 RKH-GEKKWKCEKCAKRYAVQSDWKAHSKT-CGTREYRCD-CGTIFSRRDSFITHR 191
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 268 ALHIRTHAAGSCYECSVCGRSFVRDSYLIRHHNRVH 375
AL +T A + + C +CG+ F RD L + H R H
Sbjct: 58 ALSPKTLMATNRFLCEICGKGFQRDQNL-QLHRRGH 92
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +2
Query: 14 LEIHTRTHTGERPFECDVCYKRFTQKSTLNIHKRIH 121
+ + +T F C++C K F + L +H+R H
Sbjct: 57 IALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGH 92
>At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 466
Score = 34.3 bits (75), Expect = 0.066
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +2
Query: 29 RTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHR 196
R H GE+ + C+ C KR+ +S H + G R Y CD C F+ + HR
Sbjct: 135 RKH-GEKKWTCEKCAKRYAVQSDWKAHSKT-CGTREYRCD-CGTIFSRRDSFITHR 187
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 53 FECDVCYKRFTQKSTLNIHKRIH 121
F C+VC K F + L +H+R H
Sbjct: 66 FLCEVCGKGFQRDQNLQLHRRGH 88
>At2g41940.1 68415.m05188 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 257
Score = 34.3 bits (75), Expect = 0.066
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 29 RTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHR 196
+ + R FEC C++ F L H+ H ER +A KR ++ SY+ H+
Sbjct: 87 KDNNNNRRFECHYCFRNFPTSQALGGHQNAHKRERQHA-----KRGSMTSYLHHHQ 137
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 34.3 bits (75), Expect = 0.066
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 29 RTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVK-SYVTAHR 196
R H GE+ ++C+ C KR+ +S H + G + Y CD C F+ + SY+T HR
Sbjct: 152 RKH-GEKKWKCEKCSKRYAVQSDWKAHSKT-CGTKEYRCD-CGTIFSRRDSYIT-HR 204
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 53 FECDVCYKRFTQKSTLNIHKRIH 121
F CDVC K F ++ L +H+R H
Sbjct: 83 FICDVCNKGFQREQNLQLHRRGH 105
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 125 GERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCD 232
GE+ + C+ C KR+AV+S AH K CD
Sbjct: 155 GEKKWKCEKCSKRYAVQSDWKAHS-KTCGTKEYRCD 189
>At3g23140.1 68416.m02916 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 172
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +2
Query: 17 EIHTRTHTGE--RPFECDVCYKRFTQKSTLNIHKRIHTGER 133
+I + + +GE R ++CD+C + FT L H IH ER
Sbjct: 7 QIDSGSGSGENRRTYDCDICKRGFTNPQALGGHNNIHRRER 47
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +1
Query: 304 YECSVCGRSFVRDSYLIRHHNRVHRDNHSNMSANSIGINS 423
Y+C +C R F L HN +HR ++S +S
Sbjct: 21 YDCDICKRGFTNPQAL-GGHNNIHRRERERYPSSSSSSHS 59
>At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein
(ZAT11) contains Pfam domain, PF00096: Zinc finger, C2H2
type
Length = 178
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 14 LEIHTRTHTGERPFECDVCYKRFTQKSTLNIHKRIH 121
L HT +HT + FEC C KRF+ L H+ H
Sbjct: 35 LNQHTESHTSNQ-FECKTCNKRFSSFQALGGHRASH 69
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 98 LNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSHVADK 217
LN H HT + + C C KRF+ + HR SH K
Sbjct: 35 LNQHTESHTSNQ-FECKTCNKRFSSFQALGGHRASHKKPK 73
>At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3)
identical to Cys2/His2-type zinc finger protein 3
[Arabidopsis thaliana] gi|6009889|dbj|BAA85109
Length = 193
Score = 32.7 bits (71), Expect = 0.20
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 16/70 (22%)
Frame = +2
Query: 44 ERP-FECDVCYKRFTQKSTLNIHKRIH---------------TGERPYACDICQKRFAVK 175
E+P ++C VCYK F+ L HK H T + + C +C K FA
Sbjct: 71 EKPSYKCGVCYKTFSSYQALGGHKASHRSLYGGGENDKSTPSTAVKSHVCSVCGKSFATG 130
Query: 176 SYVTAHRWSH 205
+ H+ H
Sbjct: 131 QALGGHKRCH 140
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 32.7 bits (71), Expect = 0.20
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 271 LHIRTHAAGSCYECSVCGRSFVRDSYLIRHHNRVHRD 381
L +T SC+ C +CG+SFV S + +H RVHR+
Sbjct: 188 LQTKTQWKSSCH-CKICGKSFV-CSQGLGNHKRVHRE 222
Score = 31.9 bits (69), Expect = 0.35
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 271 LHIRTHAAGSCYECSVCGRSFVRDSYL-IRHHNRVHRDNHSNMSA 402
L R ++ SCYEC VCG+ F Y + H ++HR +++
Sbjct: 87 LQKRPESSSSCYECKVCGKIF--GCYRGLGGHTKLHRSTKRELAS 129
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 298 SCYECSVCGRSFVRDSYLIRHHNRVHR 378
S Y+CS+C +SFV S + H R+HR
Sbjct: 443 SSYKCSICEKSFV-CSQALGSHQRLHR 468
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 32.7 bits (71), Expect = 0.20
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 29 RTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHR 196
R H GE+ ++C+ C K++ +S H + G + Y CD C F+ + HR
Sbjct: 162 RKH-GEKKWKCEKCSKKYAVQSDWKAHAKT-CGTKEYKCD-CGTLFSRRDSFITHR 214
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 14 LEIHTRTHTGERPFECDVCYKRFTQKSTLNIHKRIH 121
+ + +T F C+VC K F + L +HKR H
Sbjct: 79 MALSPKTLMATNRFICEVCNKGFQRDQNLQLHKRGH 114
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 125 GERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCD 232
GE+ + C+ C K++AV+S AH K CD
Sbjct: 165 GEKKWKCEKCSKKYAVQSDWKAHA-KTCGTKEYKCD 199
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 32.7 bits (71), Expect = 0.20
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 95 TLNIHKRIHTGERPYACDICQKRFAVKSYVTAH 193
TL H + G +P+AC +C K FAVK H
Sbjct: 248 TLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTH 280
>At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 361
Score = 32.3 bits (70), Expect = 0.26
Identities = 19/65 (29%), Positives = 25/65 (38%)
Frame = +2
Query: 44 ERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSHVADKPL 223
E F C CYK F L H RIHT E + +K+ V + H + +
Sbjct: 6 ENSFLCKYCYKTFPSGKALGGHIRIHTNENSVGYNGNKKKRLVDQRKMMAQ-KHKQQQQV 64
Query: 224 NCDRC 238
C C
Sbjct: 65 GCREC 69
Score = 27.1 bits (57), Expect = 10.0
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 56 ECDVCYKRFTQKSTLNIHKRIHT 124
EC +C++ F L HKR H+
Sbjct: 316 ECPICFRMFKSGQALGGHKRSHS 338
>At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1)
identical to Cys2/His2-type zinc finger protein 1
[Arabidopsis thaliana] gi|6009887|dbj|BAA85108
Length = 245
Score = 31.9 bits (69), Expect = 0.35
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 292 AGSCYECSVCGRSFVRDSYLIRHHNRVHRDNHSNMSANSIGINSV 426
+G + CS+C +SF + H R H D +N + N NSV
Sbjct: 160 SGKIHTCSICFKSFA-SGQALGGHKRCHYDGGNNGNGNGSSSNSV 203
Score = 27.1 bits (57), Expect = 10.0
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 59 CDVCYKRFTQKSTLNIHKRIH 121
C +C+K F L HKR H
Sbjct: 166 CSICFKSFASGQALGGHKRCH 186
>At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 493
Score = 31.9 bits (69), Expect = 0.35
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 29 RTHTGERPFECDVCYKRFTQKSTLNIHKRIH 121
R+ G+ C VCYK+FT L H R H
Sbjct: 122 RSERGDLEVACCVCYKKFTSMKALYGHMRFH 152
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 32 THTGERPFECDVCYKRFTQKSTLNIHKRIH 121
+H G+ C++C+K F+ L HKR H
Sbjct: 406 SHNGDHV--CNICHKSFSTGQALGGHKRCH 433
Score = 27.1 bits (57), Expect(2) = 1.0
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 44 ERPFECDVCYKRFTQKSTLNIHKRIHTGE 130
E+ C C KRF L HKRIH E
Sbjct: 76 EKKHICCECGKRFVSGKALGGHKRIHVLE 104
Score = 21.8 bits (44), Expect(2) = 1.0
Identities = 9/31 (29%), Positives = 13/31 (41%)
Frame = +2
Query: 113 RIHTGERPYACDICQKRFAVKSYVTAHRWSH 205
R G+ AC +C K+F + H H
Sbjct: 122 RSERGDLEVACCVCYKKFTSMKALYGHMRFH 152
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 31.5 bits (68), Expect = 0.46
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +2
Query: 95 TLNIHKRIHTGERPYACDICQKRFAVKSYVTAH 193
TL H + G RP+AC C K FAVK H
Sbjct: 326 TLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTH 358
>At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 373
Score = 31.1 bits (67), Expect = 0.61
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 310 CSVCGRSFVRDSYLIRHHNRVHRDNHSNMSA 402
C +CG+ F RD+ L R H R H D + A
Sbjct: 219 CQICGKGFKRDANL-RMHMRAHGDEYKTREA 248
>At5g06650.1 68418.m00751 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 191
Score = 31.1 bits (67), Expect = 0.61
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = +2
Query: 44 ERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTA--HR-WSHVAD 214
E+ F+C C++ F L H+ H ER KRF + S A HR +H+A
Sbjct: 52 EKRFKCHYCFRNFPTSQALGGHQNAHKRERQQT-----KRFNLHSNAAAFFHRQQNHIAA 106
Query: 215 KPLNCDR 235
L DR
Sbjct: 107 SRLYEDR 113
>At5g01860.1 68418.m00105 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 215
Score = 31.1 bits (67), Expect = 0.61
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +2
Query: 17 EIHTRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYA 142
E TR R F C C K F+ L H+ H ER A
Sbjct: 55 ESSTRNEAKARVFACTFCKKEFSTSQALGGHQNAHKQERSLA 96
>At1g68360.1 68414.m07808 zinc finger protein-related similar to
zinc finger protein GI:790683 from [Arabidopsis
thaliana]
Length = 244
Score = 31.1 bits (67), Expect = 0.61
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 41 GERPFECDVCYKRFTQKSTLNIHKRIHTGER 133
GER +EC C + F L H+ H ER
Sbjct: 69 GERKYECQYCCREFGNSQALGGHQNAHKKER 99
>At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein
(ZAT10) / salt-tolerance zinc finger protein (STZ)
identical to salt-tolerance zinc finger protein
GB:CAA64820 GI:1565227 from [Arabidopsis thaliana];
contains Pfam domain, PF00096: Zinc finger, C2H2 type;
identical to cDNA zinc finger protein STZ/ZAT10
(STZ/ZAT10) GI:9965730
Length = 227
Score = 31.1 bits (67), Expect = 0.61
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +1
Query: 241 DDVHVKSQFALHIRTHAAGSCYECSVCGRSFVRDSYLIRHHNRVHRDNHSNMSANSI 411
DD S T +G + C++C +SF + H R H + ++N++ +S+
Sbjct: 115 DDHSTSSATTTSAVTTGSGKSHVCTICNKSF-PSGQALGGHKRCHYEGNNNINTSSV 170
>At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 30.7 bits (66), Expect = 0.81
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 310 CSVCGRSFVRDSYLIRHHNRVHRDNHSNMSA 402
C++CG+ F RD+ L R H R H D + +A
Sbjct: 246 CTICGKGFKRDANL-RMHMRGHGDEYKTAAA 275
>At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 30.7 bits (66), Expect = 0.81
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 310 CSVCGRSFVRDSYLIRHHNRVHRDNHSNMSA 402
C++CG+ F RD+ L R H R H D + +A
Sbjct: 246 CTICGKGFKRDANL-RMHMRGHGDEYKTAAA 275
>At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 226
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 304 YECSVCGRSFVRDSYLIRHHNRVHRDNHSNMSANSIGINS 423
Y CS CGR F + + + H VHR + + + S+ +S
Sbjct: 55 YSCSFCGREF-KSAQALGGHMNVHRRDRARLKQQSLSPSS 93
>At1g04445.1 68414.m00436 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 172
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 307 ECSVCGRSFVRDSYLIRHHNRVHRDNHSNMSANS 408
EC+VC R F+ LI H+N H + + ++S
Sbjct: 8 ECAVCKRVFLSSHQLISHYNAAHSNRQYSTFSSS 41
>At5g40310.1 68418.m04890 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 348
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +2
Query: 56 ECDVCYKRFTQKSTLNIHKRI--HTGERPYACDICQK 160
+C CY++F +K L H RI H+ P C IC K
Sbjct: 7 KCGGCYRQFNKKEHLVEHMRISYHSVHEP-TCGICNK 42
>At5g08720.1 68418.m01036 expressed protein
Length = 719
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +2
Query: 488 ALFRW*XIHDVTGNSSVHARHPKQDVRSRRCPGSCI 595
AL +W +H+V+ +++ RHP + + SR+ G+ I
Sbjct: 641 ALEKWGGLHEVSRLLALNVRHPNRQLNSRKDNGNTI 676
>At3g58070.1 68416.m06473 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 253
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +2
Query: 47 RPFECDVCYKRFTQKSTLNIHKRIHTGERPYA 142
R FEC C++ F L H+ H ER A
Sbjct: 89 RRFECHYCFRNFPTSQALGGHQNAHKRERQLA 120
>At5g04340.1 68418.m00426 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 238
Score = 24.2 bits (50), Expect(2) = 1.4
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +2
Query: 53 FECDVCYKRFTQKSTLNIHKRIH 121
++C VC K F+ L HK H
Sbjct: 89 YKCSVCDKAFSSYQALGGHKASH 111
Score = 24.2 bits (50), Expect(2) = 1.4
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +2
Query: 131 RPYACDICQKRFAVKSYVTAHRWSHVADK 217
+ + C IC K FA + H+ H K
Sbjct: 146 KSHVCSICHKSFATGQALGGHKRCHYEGK 174
>At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 304
Score = 29.5 bits (63), Expect = 1.9
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 47 RPFECDVCYKRFTQKSTLNIHKRIH 121
R +EC +C + F L HK+IH
Sbjct: 272 RQYECQICNRMFASGQALGGHKKIH 296
>At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 270
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 17 EIHTRTHTGERPFECDVCYKRFTQKSTLNIHKRIH 121
++ TR+ E FECD C K F L H+ H
Sbjct: 136 DVPTRSSEVEERFECDGCKKVFGSHQALGGHRATH 170
>At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 142
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 8 RYLEIHTRTHTGE--RPFECDVCYKRFTQKSTLNIHKRIHTGER 133
+YL+ + + +G RP+ C+ C + F+ L H IH +R
Sbjct: 4 KYLDRRSYSWSGSQARPYICEFCERGFSNAQALGGHMNIHRKDR 47
>At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zinc
finger (C2H2 type) protein TT1 identical to transparent
testa 1 GI:18253279 from [Arabidopsis thaliana];
contains Pfam profile PF00096: Zinc finger, C2H2 type
Length = 303
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 95 TLNIHKRIHTGERPYACDICQKRFAVKSYVTAH 193
TL H + G +P++C +C K AVK H
Sbjct: 215 TLQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTH 247
>At4g12240.1 68417.m01941 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 364
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +1
Query: 304 YECSVCGRSFVRDSYLIRHHNRVHR-DNHSNM 396
Y C VC R F + LI H ++H +N M
Sbjct: 117 YFCGVCDRRFYTNEKLINHFKQIHETENQKRM 148
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 29 RTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFA-VKSYV 184
R H+ + + C+ C K + +S H + G R ++CD C + F+ V+S++
Sbjct: 137 RKHSNHKQWVCERCSKGYAVQSDYKAHLKT-CGTRGHSCD-CGRVFSRVESFI 187
>At5g60410.2 68418.m07579 DNA-binding family protein contains Pfam
profiles: PF02037 SAP domain, PF02891 MIZ zinc finger,
PF00628 PHD-finger
Length = 885
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/45 (22%), Positives = 23/45 (51%)
Frame = +2
Query: 98 LNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCD 232
L++ ++ R + C IC K ++V+ + ++ + K +CD
Sbjct: 387 LDVFVELNQRSRKWQCPICLKNYSVEHVIVDPYFNRITSKMKHCD 431
>At5g60410.1 68418.m07578 DNA-binding family protein contains Pfam
profiles: PF02037 SAP domain, PF02891 MIZ zinc finger,
PF00628 PHD-finger
Length = 873
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/45 (22%), Positives = 23/45 (51%)
Frame = +2
Query: 98 LNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCD 232
L++ ++ R + C IC K ++V+ + ++ + K +CD
Sbjct: 387 LDVFVELNQRSRKWQCPICLKNYSVEHVIVDPYFNRITSKMKHCD 431
>At5g43540.1 68418.m05323 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 137
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +2
Query: 47 RPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSHVA 211
R +EC C + FT L H IH +R + + A + HR HVA
Sbjct: 33 RMYECTFCKRGFTNAQALGGHMNIHRRDRLNKAKV--QNDADVALSQTHRCFHVA 85
>At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 314
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 56 ECDVCYKRFTQKSTLNIHKRIH 121
EC +C++ FT L HKR H
Sbjct: 244 ECPICFRVFTSGQALGGHKRSH 265
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 29 RTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFA-VKSYV 184
R H+ + + C+ C K + +S H + G R ++CD C + F+ V+S++
Sbjct: 140 RKHSNHKQWICERCSKGYAVQSDYKAHLKT-CGTRGHSCD-CGRVFSRVESFI 190
>At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2)
identical to Cys2/His2-type zinc finger protein 2
[Arabidopsis thaliana] gi|6009885|dbj|BAA85107
Length = 273
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +2
Query: 134 PYACDICQKRFAVKSYVTAHRWSHVADKP 220
PY C++C+K F + H+ SH P
Sbjct: 105 PYKCNVCEKAFPSYQALGGHKASHRIKPP 133
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 50 PFECDVCYKRFTQKSTLNIHKRIHTGERP 136
P++C+VC K F L HK H + P
Sbjct: 105 PYKCNVCEKAFPSYQALGGHKASHRIKPP 133
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 56 ECDVCYKRFTQKSTLNIHKRIH 121
EC +C+K F L HKR H
Sbjct: 166 ECSICHKVFPTGQALGGHKRCH 187
>At2g43200.1 68415.m05369 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 611
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -3
Query: 248 TSSSIGRSSEACPPRGTTYEPLHN-SSRRTVSGKYHTRKDVH 126
+SSS+ CP T Y P H+ S+ R S + H R++ H
Sbjct: 83 SSSSLSSYFPLCPKNFTNYLPCHDPSTARQYSIERHYRRERH 124
>At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 917
Score = 27.9 bits (59), Expect = 5.7
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +2
Query: 56 ECDVCYKRFTQKSTLNIHKRIH 121
+C +C++ F+ +L HKR+H
Sbjct: 799 KCSICHREFSTGQSLGGHKRLH 820
>At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 44 ERPFECDVCYKRFTQKSTLNIHKRIHTGE 130
ER F C C KRF +L H R H E
Sbjct: 6 ERKFVCKFCSKRFPCGKSLGGHIRTHMNE 34
>At1g68480.1 68414.m07823 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 253
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +1
Query: 292 AGSCYECSVCGRSFVRDSYLIRHHNRVHRDNHSNMSAN 405
+G YEC C F + L H NR HR + N
Sbjct: 47 SGKVYECRFCSLKFCKSQALGGHMNR-HRQERETETLN 83
>At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein
identical to C2H2 zinc finger protein ZAT1 [Arabidopsis
thaliana] gi|1418321|emb|CAA67227; contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 267
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 56 ECDVCYKRFTQKSTLNIHKRIH 121
EC +C K FT L HKR H
Sbjct: 210 ECPICAKVFTSGQALGGHKRSH 231
>At1g13400.1 68414.m01562 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 240
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +1
Query: 295 GSCYECSVCGRSFVRDSYLIRHHNRVHRDNHSNMSAN 405
G YEC C F + L H NR HR S N
Sbjct: 80 GKEYECRFCSLKFFKSQALGGHMNR-HRQERETESLN 115
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,685,933
Number of Sequences: 28952
Number of extensions: 189203
Number of successful extensions: 822
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1246162608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -