Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060693.seq
(642 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 63 2e-10
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 61 8e-10
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 60 1e-09
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 50 1e-06
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 44 7e-05
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 43 2e-04
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 43 2e-04
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 43 2e-04
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 40 0.002
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 39 0.003
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 34 0.099
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 34 0.099
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 34 0.099
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 33 0.17
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 32 0.40
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 32 0.40
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 31 0.70
AF016654-8|AAB66025.2| 331|Caenorhabditis elegans Hypothetical ... 29 2.1
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 29 3.7
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 29 3.7
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 29 3.7
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 3.7
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 3.7
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 29 3.7
Z75552-8|CAD54158.1| 939|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z75552-7|CAA99943.3| 944|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z75539-5|CAD54134.1| 939|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z75539-4|CAA99846.3| 944|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 28 4.9
AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine re... 28 4.9
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 28 4.9
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 28 4.9
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 4.9
AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine r... 28 6.5
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 27 8.6
U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical pr... 27 8.6
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/83 (36%), Positives = 50/83 (60%)
Frame = +3
Query: 264 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 443
+L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA P + + +
Sbjct: 86 NLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHE-L 144
Query: 444 KTMGYKEPTPIQAQGWPIAMSGR 512
+++PT IQ+ WPIAMSGR
Sbjct: 145 LYGKFQKPTVIQSISWPIAMSGR 167
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 509 KNLVGVLKRVPAKRWPTSXPAIVHINNQPPIRRXDGPIALVLAP 640
++++ + K K PA+VHI Q +R +GP LVL P
Sbjct: 167 RDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLP 210
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 60.9 bits (141), Expect = 8e-10
Identities = 27/84 (32%), Positives = 45/84 (53%)
Frame = +3
Query: 261 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 440
+ Q FNKNFY+ H + + +V +N + V G++ P+ F +F + +
Sbjct: 220 IQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEA 279
Query: 441 VKTMGYKEPTPIQAQGWPIAMSGR 512
++ Y++PTPIQA P A+SGR
Sbjct: 280 IRKSEYEQPTPIQAMAIPSALSGR 303
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +2
Query: 509 KNLVGVLKRVPAKRWPTSXPAIVHINNQPPIRRXDGPIALVLAP 640
++++G+ K K PAIVHI +QP ++ +GP+A+++ P
Sbjct: 303 RDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVP 346
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/57 (45%), Positives = 36/57 (63%)
Frame = +3
Query: 342 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 512
+R + +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + R
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNR 339
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 50.0 bits (114), Expect = 1e-06
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +3
Query: 261 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQ 437
V + F KNFY + + + EV+ YR + +TV G++ PI+ + + +
Sbjct: 258 VYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMN 317
Query: 438 GVKTMGYKEPTPIQAQGWPIAMSGR 512
+K Y +PT IQAQ P MSGR
Sbjct: 318 VLKKFEYSKPTSIQAQAIPSIMSGR 342
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 509 KNLVGVLKRVPAKRWPTSXPAIVHINNQPPIRRXDGPIALVLAP 640
++++G+ K K P HI +QP + DGPIA++LAP
Sbjct: 342 RDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAP 385
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 44.4 bits (100), Expect = 7e-05
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +3
Query: 360 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 512
V +G +V PI F + + +++++ +KT GY PTP+Q P GR
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGR 204
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +3
Query: 351 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 512
N V VSG V I++F EA F V + V GY +PTP+Q P ++ R
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANR 177
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +3
Query: 351 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 512
N V VSG V I++F EA F V + V GY +PTP+Q P ++ R
Sbjct: 108 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANR 161
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +3
Query: 351 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 512
N V VSG V I++F EA F V + V GY +PTP+Q P ++ R
Sbjct: 105 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANR 158
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +3
Query: 297 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 473
P + ++S + E R ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 474 IQAQGWPIAMSGR 512
IQ QG P+A+SGR
Sbjct: 216 IQIQGIPVALSGR 228
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Frame = +3
Query: 267 LQPFNKNFYDPHPTVLKRSPYEVEE-YRNNHEVTV------SGVEVHNPIQYFEEANFPD 425
++P ++ Y SP +++E Y N + V S V++ P+ FE+A +
Sbjct: 33 MKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAFGSN 92
Query: 426 YVQQG-VKTMGYKEPTPIQAQGWPIAMSGR 512
G ++ G+++P+PIQ+Q WP+ +SG+
Sbjct: 93 ASIMGEIRKNGFEKPSPIQSQMWPLLLSGQ 122
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 33.9 bits (74), Expect = 0.099
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 390 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 509
P + F EAN + +Q+ V GY + TPIQ P+ G
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQG 378
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 33.9 bits (74), Expect = 0.099
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 390 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 509
P + F EAN + +Q+ V GY + TPIQ P+ G
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQG 378
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 33.9 bits (74), Expect = 0.099
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 390 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 509
P + F EAN + +Q+ V GY + TPIQ P+ G
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQG 378
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 33.1 bits (72), Expect = 0.17
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 402 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 512
FE+ N + + GY +PTPIQ P+A++G+
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGK 186
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 31.9 bits (69), Expect = 0.40
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 390 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGRI*LA 524
P + F +++ P +++ V+ GY TPIQ P+ G+ LA
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 31.9 bits (69), Expect = 0.40
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 390 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGRI*LA 524
P + F +++ P +++ V+ GY TPIQ P+ G+ LA
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 31.1 bits (67), Expect = 0.70
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 104 VETVVPNLEEATNSAIIRLDLATVAVDLEDLEDLVGKKN 220
+ETV+ LE N +RL+ A VA E LE + GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>AF016654-8|AAB66025.2| 331|Caenorhabditis elegans Hypothetical
protein C17A2.1 protein.
Length = 331
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/78 (23%), Positives = 35/78 (44%)
Frame = +3
Query: 300 HPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 479
H + R+ +V ++ N + T+ +H + +E A F + +K + I
Sbjct: 213 HNKEISRTDKKVMKFINQVKSTLGTALIHLKLNIYEFAAFKSFCIWNIKFHKTSQTMRIV 272
Query: 480 AQGWPIAMSGRI*LAYSN 533
AQG +A+S + + Y N
Sbjct: 273 AQGHYVAVSSALRVYYKN 290
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 420 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 512
P+ V + ++ MG+ EPT IQ+ P A+ R
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDR 193
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 402 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 509
F EAN + +++ V GY + TPIQ P+ G
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQG 589
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 402 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 509
F EAN + +++ V GY + TPIQ P+ G
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQG 589
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/58 (24%), Positives = 30/58 (51%)
Frame = -2
Query: 506 RHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLFD 333
R +YR N + + + Y + +I + F + + ++NLN T +L I+++F+
Sbjct: 29 RKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIFN 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/58 (24%), Positives = 30/58 (51%)
Frame = -2
Query: 506 RHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLFD 333
R +YR N + + + Y + +I + F + + ++NLN T +L I+++F+
Sbjct: 29 RKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIFN 86
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 402 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 509
F EAN + +++ V GY + TPIQ P+ G
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQG 589
>Z75552-8|CAD54158.1| 939|Caenorhabditis elegans Hypothetical
protein F28C1.3b protein.
Length = 939
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -3
Query: 313 RTVGCGS*KFLLKGWSETESNLGDACSDLQRILFSHQILQILQIYCHRCQ 164
RTV + L+ G+ E S+L + D QR++ S +IL + C R Q
Sbjct: 78 RTVSFPADMDLITGYHEAPSSLFHSYHDSQRVIDSSEILTAYREACQRRQ 127
>Z75552-7|CAA99943.3| 944|Caenorhabditis elegans Hypothetical
protein F28C1.3a protein.
Length = 944
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -3
Query: 313 RTVGCGS*KFLLKGWSETESNLGDACSDLQRILFSHQILQILQIYCHRCQ 164
RTV + L+ G+ E S+L + D QR++ S +IL + C R Q
Sbjct: 78 RTVSFPADMDLITGYHEAPSSLFHSYHDSQRVIDSSEILTAYREACQRRQ 127
>Z75539-5|CAD54134.1| 939|Caenorhabditis elegans Hypothetical
protein F28C1.3b protein.
Length = 939
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -3
Query: 313 RTVGCGS*KFLLKGWSETESNLGDACSDLQRILFSHQILQILQIYCHRCQ 164
RTV + L+ G+ E S+L + D QR++ S +IL + C R Q
Sbjct: 78 RTVSFPADMDLITGYHEAPSSLFHSYHDSQRVIDSSEILTAYREACQRRQ 127
>Z75539-4|CAA99846.3| 944|Caenorhabditis elegans Hypothetical
protein F28C1.3a protein.
Length = 944
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -3
Query: 313 RTVGCGS*KFLLKGWSETESNLGDACSDLQRILFSHQILQILQIYCHRCQ 164
RTV + L+ G+ E S+L + D QR++ S +IL + C R Q
Sbjct: 78 RTVSFPADMDLITGYHEAPSSLFHSYHDSQRVIDSSEILTAYREACQRRQ 127
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 156 RIIAEFVASSKFGTTVSTAIIPV 88
++I +FVA S G T+STA P+
Sbjct: 221 QLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 156 RIIAEFVASSKFGTTVSTAIIPV 88
++I +FVA S G T+STA P+
Sbjct: 130 QLIGDFVAGSLLGATISTAFFPL 152
>AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine
receptor, class t protein53 protein.
Length = 318
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = -2
Query: 506 RHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLFDFI 327
R S+RP + +R+ F+ L L+H+ I + +M +L IIS ++
Sbjct: 224 RKSFRPKRTARQRQIFLQAFLLCLIHLSASILYV-----VMQFIEVPKFLTIIS---QYL 275
Query: 326 W*SFENCRMWIIKVF 282
W + C + I +F
Sbjct: 276 WQLAQGCPVIIYLIF 290
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +3
Query: 384 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGRI*LAYS 530
H +++ V + ++ G+ +PTPIQ + P M G+ +A S
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMS 68
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +3
Query: 384 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGRI*LAYS 530
H +++ V + ++ G+ +PTPIQ + P M G+ +A S
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMS 68
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +2
Query: 470 AYSSSRLADSYVWKNLVGVLKRVPAKRWPTSXPAIVHINNQPP 598
A SSR + + + + + ++ +PA R TS P++ +++N P
Sbjct: 821 ALPSSRPSKTLLTPSELPIISNLPASRQSTSAPSVPNVSNNSP 863
>AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 12 protein.
Length = 341
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -3
Query: 232 DLQRILFSHQILQILQIYCHRCQIETN-YR-RICCL 131
D +S I QI+ +CH+ +++TN +R RI CL
Sbjct: 268 DASIFFYSFAIPQIMTCFCHKWKVQTNTFRIRIGCL 303
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 297 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 455
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 297 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 455
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
>U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical
protein B0361.10 protein.
Length = 201
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 464 TDAYSSSRLADSYVWKNLVGVLKRVPAKRWP 556
TDA R+A S++ + L RVPA +WP
Sbjct: 83 TDAEYQQRVAMSFLGRVLDDFTTRVPATQWP 113
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,440,483
Number of Sequences: 27780
Number of extensions: 266125
Number of successful extensions: 832
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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