BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060692.seq
(636 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B4325 Cluster: PREDICTED: similar to aconitase,... 134 2e-30
UniRef50_Q9VIE8 Cluster: CG9244-PB; n=37; cellular organisms|Rep... 129 5e-29
UniRef50_Q99798 Cluster: Aconitate hydratase, mitochondrial prec... 123 3e-27
UniRef50_O13966 Cluster: Aconitate hydratase, mitochondrial prec... 118 2e-25
UniRef50_Q0CSK9 Cluster: Aconitate hydratase, mitochondrial; n=2... 109 4e-23
UniRef50_P19414 Cluster: Aconitate hydratase, mitochondrial prec... 103 3e-21
UniRef50_Q4PB22 Cluster: Putative uncharacterized protein; n=5; ... 82 9e-15
UniRef50_Q4AHJ7 Cluster: Aconitate hydratase; n=1; Chlorobium ph... 77 3e-13
UniRef50_Q2UTF0 Cluster: Aconitase/homoaconitase; n=9; cellular ... 75 1e-12
UniRef50_Q0USA6 Cluster: Putative uncharacterized protein; n=2; ... 74 3e-12
UniRef50_Q5AVN8 Cluster: Putative uncharacterized protein; n=1; ... 71 2e-11
UniRef50_A0RTP9 Cluster: 3-isopropylmalate isomerase/aconitase A... 60 3e-08
UniRef50_UPI0000498C9D Cluster: conserved hypothetical protein; ... 34 2.5
UniRef50_Q07RK3 Cluster: DNA or RNA helicase of superfamily II; ... 34 3.3
UniRef50_Q74AD1 Cluster: Aconitate hydratase, putative; n=12; Ba... 33 4.4
UniRef50_A6GBV2 Cluster: Trypsin domain lipoprotein; n=1; Plesio... 33 5.8
UniRef50_Q23RI6 Cluster: Myb-like DNA-binding domain containing ... 33 7.6
>UniRef50_UPI00015B4325 Cluster: PREDICTED: similar to aconitase,
mitochondrial; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to aconitase, mitochondrial - Nasonia
vitripennis
Length = 917
Score = 134 bits (323), Expect = 2e-30
Identities = 66/87 (75%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Frame = +1
Query: 262 AQVAMSKFDKVP-LPYEKLTKNLEVVKKRLGRELTLSEKILYSHLDDPKGQEIERGASYL 438
A+VAMSKFD LPY+KL +N+++VKKRL R LTLSEKILYSHLD+P+ Q+I RG SYL
Sbjct: 164 AKVAMSKFDSTAYLPYDKLDENIKIVKKRLDRPLTLSEKILYSHLDEPQKQDIVRGTSYL 223
Query: 439 RLRPDRVAMQDATAQMAMLQFISSAFP 519
RLRPDRVAMQDATAQMAMLQFISS P
Sbjct: 224 RLRPDRVAMQDATAQMAMLQFISSGLP 250
Score = 87.8 bits (208), Expect = 2e-16
Identities = 63/146 (43%), Positives = 77/146 (52%), Gaps = 5/146 (3%)
Frame = +3
Query: 213 SEIQQRCFSVSPLTPPRPGGDVQVRQGT--LALRKVDXXXXXXXXXXXXXIDLV*ENPIF 386
+E+QQRCFS SPLT + T L K+D + L E ++
Sbjct: 147 AEVQQRCFSTSPLTFAAAKVAMSKFDSTAYLPYDKLDENIKIVKKRLDRPLTLS-EKILY 205
Query: 387 S-LG*PQRTGN*TRRKLSPPASRPCGHARRHCTNGNVTIYLF--GLPRVAVPSTIHCDHL 557
S L PQ+ R S RP A + T + GLPRVAVPSTIHCDHL
Sbjct: 206 SHLDEPQKQD--IVRGTSYLRLRPDRVAMQDATAQMAMLQFISSGLPRVAVPSTIHCDHL 263
Query: 558 IEAQVGGEKDLARAKDLNKEVYKFLE 635
IEAQ+GG+KDL RAKD+NKEVY FL+
Sbjct: 264 IEAQLGGDKDLKRAKDINKEVYSFLK 289
>UniRef50_Q9VIE8 Cluster: CG9244-PB; n=37; cellular organisms|Rep:
CG9244-PB - Drosophila melanogaster (Fruit fly)
Length = 787
Score = 129 bits (312), Expect = 5e-29
Identities = 65/84 (77%), Positives = 72/84 (85%), Gaps = 1/84 (1%)
Frame = +1
Query: 262 AQVAMSKFDK-VPLPYEKLTKNLEVVKKRLGRELTLSEKILYSHLDDPKGQEIERGASYL 438
++VA+SKFD V LPYEKL K LEVV+ RL R LTLSEK+LYSHLDDP Q+I RG SYL
Sbjct: 37 SKVALSKFDSDVYLPYEKLNKRLEVVRGRLNRPLTLSEKVLYSHLDDPANQDIVRGTSYL 96
Query: 439 RLRPDRVAMQDATAQMAMLQFISS 510
RLRPDRVAMQDATAQMA+LQFISS
Sbjct: 97 RLRPDRVAMQDATAQMALLQFISS 120
Score = 79.8 bits (188), Expect = 5e-14
Identities = 35/41 (85%), Positives = 38/41 (92%)
Frame = +3
Query: 510 GLPRVAVPSTIHCDHLIEAQVGGEKDLARAKDLNKEVYKFL 632
GL +VAVPST+HCDHLIEAQ+GG KDLARAKDLNKEVY FL
Sbjct: 121 GLKKVAVPSTVHCDHLIEAQIGGPKDLARAKDLNKEVYDFL 161
>UniRef50_Q99798 Cluster: Aconitate hydratase, mitochondrial
precursor; n=28; cellular organisms|Rep: Aconitate
hydratase, mitochondrial precursor - Homo sapiens
(Human)
Length = 780
Score = 123 bits (297), Expect = 3e-27
Identities = 62/86 (72%), Positives = 71/86 (82%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 RRAQVAMSKFDKVP-LPYEKLTKNLEVVKKRLGRELTLSEKILYSHLDDPKGQEIERGAS 432
+RA+VAMS F+ + Y+ L KN+ +V+KRL R LTLSEKI+Y HLDDP QEIERG S
Sbjct: 28 QRAKVAMSHFEPNEYIHYDLLEKNINIVRKRLNRPLTLSEKIVYGHLDDPASQEIERGKS 87
Query: 433 YLRLRPDRVAMQDATAQMAMLQFISS 510
YLRLRPDRVAMQDATAQMAMLQFISS
Sbjct: 88 YLRLRPDRVAMQDATAQMAMLQFISS 113
Score = 79.0 bits (186), Expect = 9e-14
Identities = 35/41 (85%), Positives = 38/41 (92%)
Frame = +3
Query: 510 GLPRVAVPSTIHCDHLIEAQVGGEKDLARAKDLNKEVYKFL 632
GL +VAVPSTIHCDHLIEAQVGGEKDL RAKD+N+EVY FL
Sbjct: 114 GLSKVAVPSTIHCDHLIEAQVGGEKDLRRAKDINQEVYNFL 154
>UniRef50_O13966 Cluster: Aconitate hydratase, mitochondrial
precursor; n=21; cellular organisms|Rep: Aconitate
hydratase, mitochondrial precursor - Schizosaccharomyces
pombe (Fission yeast)
Length = 778
Score = 118 bits (283), Expect = 2e-25
Identities = 57/86 (66%), Positives = 69/86 (80%), Gaps = 1/86 (1%)
Frame = +1
Query: 265 QVAMSKFDKVP-LPYEKLTKNLEVVKKRLGRELTLSEKILYSHLDDPKGQEIERGASYLR 441
+VAMS F+K + Y+++ NLE+VKKRL R LT SEKILY HLDDP Q+IERG SYL+
Sbjct: 27 KVAMSNFEKNKFINYQRIKDNLEIVKKRLNRPLTYSEKILYGHLDDPVNQDIERGVSYLK 86
Query: 442 LRPDRVAMQDATAQMAMLQFISSAFP 519
LRPDRVA QDATAQMA+LQF+S+ P
Sbjct: 87 LRPDRVACQDATAQMAILQFMSAGMP 112
Score = 62.5 bits (145), Expect = 8e-09
Identities = 28/42 (66%), Positives = 31/42 (73%)
Frame = +3
Query: 510 GLPRVAVPSTIHCDHLIEAQVGGEKDLARAKDLNKEVYKFLE 635
G+P VAVP T+HCDHLIEA GG DL RA NKEVY FL+
Sbjct: 110 GMPEVAVPVTVHCDHLIEAYEGGPIDLERANVTNKEVYDFLQ 151
>UniRef50_Q0CSK9 Cluster: Aconitate hydratase, mitochondrial; n=2;
Pezizomycotina|Rep: Aconitate hydratase, mitochondrial -
Aspergillus terreus (strain NIH 2624)
Length = 781
Score = 109 bits (263), Expect = 4e-23
Identities = 48/70 (68%), Positives = 62/70 (88%)
Frame = +1
Query: 310 KLTKNLEVVKKRLGRELTLSEKILYSHLDDPKGQEIERGASYLRLRPDRVAMQDATAQMA 489
K+++NL++V++RL R LT +EK+LYSHLDDP GQ+IERG SYL+LRPDRVA QDATAQMA
Sbjct: 77 KMSENLDIVRRRLSRPLTYAEKVLYSHLDDPHGQDIERGVSYLKLRPDRVACQDATAQMA 136
Query: 490 MLQFISSAFP 519
+LQF+S+ P
Sbjct: 137 ILQFMSAGMP 146
Score = 76.6 bits (180), Expect = 5e-13
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = +3
Query: 510 GLPRVAVPSTIHCDHLIEAQVGGEKDLARAKDLNKEVYKFL 632
G+P VA P+T+HCDHLIEAQVGGEKDLARA ++NKEVY FL
Sbjct: 144 GMPSVATPTTVHCDHLIEAQVGGEKDLARANEINKEVYDFL 184
>UniRef50_P19414 Cluster: Aconitate hydratase, mitochondrial
precursor; n=41; cellular organisms|Rep: Aconitate
hydratase, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 778
Score = 103 bits (248), Expect = 3e-21
Identities = 46/72 (63%), Positives = 59/72 (81%)
Frame = +1
Query: 304 YEKLTKNLEVVKKRLGRELTLSEKILYSHLDDPKGQEIERGASYLRLRPDRVAMQDATAQ 483
Y++ + L++V+KRL R T +EKILY HLDDP GQ+I+RG SYL+LRPDRVA QDATAQ
Sbjct: 41 YKQNVETLDIVRKRLNRPFTYAEKILYGHLDDPHGQDIQRGVSYLKLRPDRVACQDATAQ 100
Query: 484 MAMLQFISSAFP 519
MA+LQF+S+ P
Sbjct: 101 MAILQFMSAGLP 112
Score = 74.1 bits (174), Expect = 3e-12
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = +3
Query: 510 GLPRVAVPSTIHCDHLIEAQVGGEKDLARAKDLNKEVYKFL 632
GLP+VA P T+HCDHLI+AQVGGEKDL RA DLNKEVY FL
Sbjct: 110 GLPQVAKPVTVHCDHLIQAQVGGEKDLKRAIDLNKEVYDFL 150
>UniRef50_Q4PB22 Cluster: Putative uncharacterized protein; n=5;
Fungi/Metazoa group|Rep: Putative uncharacterized
protein - Ustilago maydis (Smut fungus)
Length = 1041
Score = 82.2 bits (194), Expect = 9e-15
Identities = 45/85 (52%), Positives = 60/85 (70%), Gaps = 8/85 (9%)
Frame = +1
Query: 289 KVPLPYEKLTKNLEVVKKRLGRELTLSEKILYSHLDDPK------GQEIE--RGASYLRL 444
+VP PY +L NLE V+ +L R LTLSEKILYSHL +P+ G ++ RG YL+L
Sbjct: 149 RVP-PYTELLTNLETVRAQLNRPLTLSEKILYSHLRNPEHDLAGVGADVSAIRGKKYLKL 207
Query: 445 RPDRVAMQDATAQMAMLQFISSAFP 519
+ DR+AMQDA+AQMA+LQF++ P
Sbjct: 208 KIDRLAMQDASAQMALLQFMTCGLP 232
Score = 58.4 bits (135), Expect = 1e-07
Identities = 25/42 (59%), Positives = 32/42 (76%)
Frame = +3
Query: 510 GLPRVAVPSTIHCDHLIEAQVGGEKDLARAKDLNKEVYKFLE 635
GLPR A+PS++HCDHLI+A G E DL R+ N+EV+ FLE
Sbjct: 230 GLPRTAIPSSVHCDHLIQAFEGAEADLKRSIASNQEVFAFLE 271
>UniRef50_Q4AHJ7 Cluster: Aconitate hydratase; n=1; Chlorobium
phaeobacteroides BS1|Rep: Aconitate hydratase -
Chlorobium phaeobacteroides BS1
Length = 141
Score = 77.4 bits (182), Expect = 3e-13
Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Frame = +1
Query: 286 DKVPLPYEKLTKNLEVVKKRLGRELTLSEKILYSHLD-DPKGQEIERGASYLRLRPDRVA 462
D + YEK ++ + L + +TL+EKILY+HLD + +RG SY+ RPDRVA
Sbjct: 19 DMIKSLYEKFPGRVKAARALLNKPMTLAEKILYAHLDGELPSASFDRGNSYVDFRPDRVA 78
Query: 463 MQDATAQMAMLQFISSAFP 519
MQDATAQMA+LQF+ + P
Sbjct: 79 MQDATAQMALLQFMQAGKP 97
Score = 57.2 bits (132), Expect = 3e-07
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = +3
Query: 510 GLPRVAVPSTIHCDHLIEAQVGGEKDLARAKDLNKEVYKFL 632
G P+ AV S++HCDHLI+A+ G E+DLA A NKEVY FL
Sbjct: 95 GKPQAAVSSSVHCDHLIQAKSGAEQDLANADFTNKEVYDFL 135
>UniRef50_Q2UTF0 Cluster: Aconitase/homoaconitase; n=9; cellular
organisms|Rep: Aconitase/homoaconitase - Aspergillus
oryzae
Length = 806
Score = 75.4 bits (177), Expect = 1e-12
Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 5/77 (6%)
Frame = +1
Query: 304 YEKLTKNLEVVKKRLGRELTLSEKILYSHL---DDPKG--QEIERGASYLRLRPDRVAMQ 468
Y + NL+ V++ R LTL+EK+LYSHL DD QEI+RG + L LRPDRVA
Sbjct: 49 YGEQLSNLDTVRQSSRRPLTLTEKLLYSHLIPSDDKVWSLQEIDRGKTILELRPDRVACH 108
Query: 469 DATAQMAMLQFISSAFP 519
DATA MA+LQFIS+ P
Sbjct: 109 DATATMALLQFISAGLP 125
Score = 53.6 bits (123), Expect = 4e-06
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +3
Query: 510 GLPRVAVPSTIHCDHLIEAQVGGEKDLARAKDLNKEVYKFL 632
GLPRVAVP+T+H DHLI ++ G E D+ RA + EVY+FL
Sbjct: 123 GLPRVAVPTTVHGDHLIVSEKGAEPDMKRALTEHAEVYEFL 163
>UniRef50_Q0USA6 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 781
Score = 74.1 bits (174), Expect = 3e-12
Identities = 52/111 (46%), Positives = 72/111 (64%), Gaps = 12/111 (10%)
Frame = +1
Query: 211 SLKSN-KDVSAYLH*PRRAQVAMSKFDKVPLPYEKLTKNLEVVKKRLG--RELTLSEKIL 381
SL+SN + A H P A+ + + P PY KL L V++ LG R LTL+EKIL
Sbjct: 21 SLRSNHRRALATSHDPPSAR-NVDISSRTP-PYPKLLARLADVRRVLGSTRHLTLAEKIL 78
Query: 382 YSHLDDPK---------GQEIERGASYLRLRPDRVAMQDATAQMAMLQFIS 507
Y+HL++P+ G++I RG + L+L+PDRVAMQDA+AQMA+LQF+S
Sbjct: 79 YAHLENPEESLLSNTNNGRDI-RGQANLKLKPDRVAMQDASAQMALLQFMS 128
Score = 49.2 bits (112), Expect = 8e-05
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +3
Query: 510 GLPRVAVPSTIHCDHLIEAQVGGEKDLARAKDLNKEVYKFLE 635
GL + AVP++IHCDH+I + G + DL ++ NKEV+ FLE
Sbjct: 130 GLGKTAVPASIHCDHMIVGEKGADLDLPQSIKGNKEVFDFLE 171
>UniRef50_Q5AVN8 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 326
Score = 70.9 bits (166), Expect = 2e-11
Identities = 34/80 (42%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Frame = +1
Query: 262 AQVAMSKFDK-VPLPYEKLTKNLEVVKKRLGRELTLSEKILYSHLDDPKGQEIERGASYL 438
A A+ +F+ + + K + + +++RL R LT +EK+LY+HLDD I RG + L
Sbjct: 22 ATAALGRFESDTQVDFSKFSSKIGTLRRRLKRPLTYAEKVLYNHLDDEFDGNIVRGQTQL 81
Query: 439 RLRPDRVAMQDATAQMAMLQ 498
R +P R+A QDATAQMA++Q
Sbjct: 82 RSKPVRIACQDATAQMALIQ 101
>UniRef50_A0RTP9 Cluster: 3-isopropylmalate isomerase/aconitase A;
n=7; cellular organisms|Rep: 3-isopropylmalate
isomerase/aconitase A - Cenarchaeum symbiosum
Length = 754
Score = 60.5 bits (140), Expect = 3e-08
Identities = 30/67 (44%), Positives = 40/67 (59%)
Frame = +1
Query: 304 YEKLTKNLEVVKKRLGRELTLSEKILYSHLDDPKGQEIERGASYLRLRPDRVAMQDATAQ 483
YE+L + ++ +K GR LTLSEKI+ H+ Y+ L PDRVA+QD T Q
Sbjct: 14 YERLREGIDRYRKDAGRPLTLSEKIMAGHMVRDGTDIPVENKDYVHLTPDRVALQDVTGQ 73
Query: 484 MAMLQFI 504
M MLQF+
Sbjct: 74 MVMLQFM 80
Score = 48.4 bits (110), Expect = 1e-04
Identities = 20/37 (54%), Positives = 29/37 (78%)
Frame = +3
Query: 525 AVPSTIHCDHLIEAQVGGEKDLARAKDLNKEVYKFLE 635
A+P+TIHCDHLI A+V G +D+ + D N EV++FL+
Sbjct: 88 ALPTTIHCDHLIRAKVEGGEDMRVSLDENSEVFRFLK 124
>UniRef50_UPI0000498C9D Cluster: conserved hypothetical protein;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 905
Score = 34.3 bits (75), Expect = 2.5
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Frame = +1
Query: 259 RAQVAMSKFDK-VPLPYEKLTKNLEVVKKRLGRELTLSE---KILYSHLDDP 402
RA + + DK YE+ K +E +KK +GRELTL E K+ Y +++ P
Sbjct: 651 RAGIIRDEQDKQTQKDYEESVKRVEELKKSIGRELTLKEQWYKVKYDYINIP 702
>UniRef50_Q07RK3 Cluster: DNA or RNA helicase of superfamily II;
n=12; Bacteria|Rep: DNA or RNA helicase of superfamily
II - Rhodopseudomonas palustris (strain BisA53)
Length = 1066
Score = 33.9 bits (74), Expect = 3.3
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -1
Query: 207 PPLSCYPGHAKLSYSAPWSPDFSILNELI*KNF 109
PP C P H ++ ++ W FS +N+L+ +N+
Sbjct: 12 PPADCMPRHLRVRLASAWGSRFSAMNQLLIQNY 44
>UniRef50_Q74AD1 Cluster: Aconitate hydratase, putative; n=12;
Bacteria|Rep: Aconitate hydratase, putative - Geobacter
sulfurreducens
Length = 645
Score = 33.5 bits (73), Expect = 4.4
Identities = 22/48 (45%), Positives = 30/48 (62%)
Frame = +1
Query: 364 LSEKILYSHLDDPKGQEIERGASYLRLRPDRVAMQDATAQMAMLQFIS 507
L+ KIL +HL KG E+ G + L+ D +QDAT MAML+FI+
Sbjct: 5 LATKILEAHL--VKG-ELTPGTE-IALKIDHALLQDATGTMAMLEFIA 48
>UniRef50_A6GBV2 Cluster: Trypsin domain lipoprotein; n=1;
Plesiocystis pacifica SIR-1|Rep: Trypsin domain
lipoprotein - Plesiocystis pacifica SIR-1
Length = 323
Score = 33.1 bits (72), Expect = 5.8
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 265 GRGGVNGDTLKHLCWISESTTLVLLPWPCKTLIQCAMVAG 146
G GG+ G L LCW+ +S+ + LLP C + C + G
Sbjct: 238 GGGGIYGVPLPELCWLRDSSGVDLLPEGCSS-CDCVALPG 276
>UniRef50_Q23RI6 Cluster: Myb-like DNA-binding domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Myb-like DNA-binding domain containing protein -
Tetrahymena thermophila SB210
Length = 914
Score = 32.7 bits (71), Expect = 7.6
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +1
Query: 205 WYSLKSNKDVSAYLH*PRRAQVAMSKFDKVPLPYEKLTKNLEVVKKRLGRE---LTLSEK 375
+YSL S+K + P + + FDK+PL K TK + K L ++ L + E+
Sbjct: 166 YYSLDSDKVIE-----PIKEEKLQKFFDKLPLLKSKFTKQYKSAPKSLNQQSQYLDIKEE 220
Query: 376 ILYSHLDDPKGQEIERGASYL 438
+ S++D K EI ++ L
Sbjct: 221 MSNSNIDGLKKLEISENSTCL 241
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,101,225
Number of Sequences: 1657284
Number of extensions: 13740566
Number of successful extensions: 37715
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 36460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37707
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47296372782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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