Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060692.seq
         (636 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    29   0.032
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    24   1.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.8  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   3.7  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   4.9  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   6.5  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   6.5  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   8.6  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 29.1 bits (62), Expect = 0.032
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -1

Query: 636 SLKTCILLC*GP*PWPNPSRLRLGLRSS 553
           SL TC +LC  P  WP P  ++L  R S
Sbjct: 64  SLATCNMLCSEPAIWPKPVHIKLTNRES 91


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 636 SLKTCILLC*GP*PWPNPS 580
           SL TC +LC     WP P+
Sbjct: 78  SLSTCSMLCGSTQLWPQPT 96


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +1

Query: 397  DPKGQEIERGASYLRLRPDRVAMQDATAQMAMLQFISSAF 516
            D   QE+     YL+L P  +      A + ++QF++  F
Sbjct: 1308 DESTQEVHISKEYLQLEPIGLVFVFFFALILVIQFVAMLF 1347


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +1

Query: 397  DPKGQEIERGASYLRLRPDRVAMQDATAQMAMLQFISSAF 516
            D   QE+     YL+L P  +      A + ++QF++  F
Sbjct: 1308 DESTQEVHISKEYLQLEPIGLVFVFFFALILVIQFVAMLF 1347


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +1

Query: 277 SKFDKVPLPYEKLTKNLEVVKKRLGREL 360
           S    V +P+E+  +NL++ + + G EL
Sbjct: 545 SSQSSVTIPFERTFRNLDLNRPQGGEEL 572


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2

Query: 410 CPLGSSK*EYRIFSDKVNSLPSLFLTTSKFF 318
           C L  S    ++F  K+    S+F+TT+ F+
Sbjct: 220 CNLTFSWYSKKVFYSKIIISGSIFMTTTSFY 250


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +3

Query: 243 SPLTPPRPGGDVQVRQGTLALRKV 314
           SP + P P GD     GTL   ++
Sbjct: 273 SPSSGPAPPGDFTENMGTLGYNEL 296


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 237 SVSPLTPPRP 266
           SVSP TPP P
Sbjct: 92  SVSPTTPPTP 101


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +3

Query: 399 PQRTGN*TRRKLSPPASRPCGHARRHC 479
           P+R  +  ++ L+P    P G   R+C
Sbjct: 411 PERFSDENKKNLTPYTYLPFGEGPRNC 437


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,191
Number of Sequences: 336
Number of extensions: 3233
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)