Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060691.seq
(627 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_1011 + 13198641-13198899,13199471-13199604,13199805-131999... 144 5e-35
01_04_0053 - 15444421-15444747,15444905-15445116,15445198-154453... 74 1e-13
03_05_0491 - 24868261-24869383,24869482-24869561,24870193-248702... 70 2e-12
12_02_1133 - 26368323-26369457,26369556-26369635,26370145-263702... 69 4e-12
05_04_0401 - 20982923-20983106,20983129-20983186,20983322-209835... 55 4e-08
08_01_0709 + 6265949-6266452,6267697-6267786,6268257-6268402,626... 38 0.005
03_06_0449 - 34013973-34014056,34014595-34014630,34014729-340148... 37 0.011
03_02_0267 + 6990674-6990890,6991692-6991761,6991824-6991913,699... 37 0.011
01_01_0879 + 6896587-6896701,6896819-6897005,6897475-6897774,689... 37 0.015
11_06_0499 + 24354810-24355212,24355677-24355735,24355846-243559... 36 0.020
11_04_0165 + 14305885-14306007,14306538-14306642,14306792-143068... 35 0.061
01_01_0850 - 6641980-6642163,6642791-6644091 35 0.061
08_02_0627 + 19449196-19449651,19449723-19449861,19450260-194503... 34 0.11
07_01_0075 - 558829-560859 31 0.57
06_01_0668 - 4882174-4884204 31 0.57
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 31 0.99
08_01_0387 - 3426058-3426168,3426279-3426473,3426612-3426724,342... 30 1.3
07_03_1353 - 25966332-25966421,25966477-25966528,25966612-259668... 30 1.7
10_08_1002 + 22160109-22160264,22160374-22160484,22160612-221606... 29 2.3
05_07_0147 - 28022018-28022104,28022207-28022287,28022513-280226... 29 2.3
08_01_0610 - 5367271-5367312,5367737-5367805,5368208-5368360,536... 29 4.0
12_01_0203 + 1520079-1520302,1522346-1522405,1522794-1523016,152... 28 5.3
03_05_0693 + 26810711-26810786,26810915-26810992,26811659-268118... 28 5.3
01_06_1258 + 35806557-35806932,35807517-35807679,35807789-358078... 28 5.3
01_01_1188 - 9446764-9446943,9447030-9447232,9447307-9447438,944... 28 5.3
10_01_0108 + 1337009-1338190 28 7.0
09_04_0657 + 19271266-19271388,19271906-19271910,19272005-192720... 28 7.0
08_02_0225 + 14469037-14469064,14470004-14470215,14470324-144704... 28 7.0
08_01_0466 + 4105524-4105812,4105975-4106356,4107042-4109073 28 7.0
05_02_0117 - 6779121-6779582 28 7.0
>03_02_1011 +
13198641-13198899,13199471-13199604,13199805-13199934,
13200290-13200450,13200587-13200688,13200786-13200890,
13200965-13201093,13201180-13201320,13201855-13201955,
13202300-13202357,13202656-13202943
Length = 535
Score = 144 bits (349), Expect = 5e-35
Identities = 66/79 (83%), Positives = 72/79 (91%)
Frame = +1
Query: 13 FGKGSLINLLRQFGKLHIDKKQISVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGETKVW 192
FGKGSL+++LRQF +L DK+ ISVGF+GYPNVGKSSVINTLRSK VCKVAPI GETKVW
Sbjct: 295 FGKGSLLSVLRQFARLKSDKQAISVGFVGYPNVGKSSVINTLRSKSVCKVAPIPGETKVW 354
Query: 193 QYITLMKRIFLIDCPGVVY 249
QYITL KRIFLIDCPGVVY
Sbjct: 355 QYITLTKRIFLIDCPGVVY 373
Score = 94.3 bits (224), Expect = 7e-20
Identities = 41/84 (48%), Positives = 63/84 (75%)
Frame = +3
Query: 258 ETDTEKVLKGVVRVELVQNPDDYIEEVIKRVRKEYLVKTYKVDGWETATEFLEKLAARTG 437
+++T+ VLKGVVRV + + ++I EV++RV+KE+L + YK++ W +FL +L+ TG
Sbjct: 377 DSETDIVLKGVVRVTNLADASEHIGEVLRRVKKEHLKRAYKIEDWVDDNDFLVQLSKTTG 436
Query: 438 KLLKKGEPDVNQVARMVLNDWQRG 509
KLL+ GEPD+ A+MVL+DWQRG
Sbjct: 437 KLLRGGEPDLTTTAKMVLHDWQRG 460
>01_04_0053 -
15444421-15444747,15444905-15445116,15445198-15445377,
15445572-15445836,15446308-15446522,15446611-15446784,
15446872-15447010,15447523-15447786
Length = 591
Score = 73.7 bits (173), Expect = 1e-13
Identities = 35/77 (45%), Positives = 50/77 (64%)
Frame = +1
Query: 16 GKGSLINLLRQFGKLHIDKKQISVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGETKVWQ 195
G +LI LL+ + + H K I+VG +G PNVGKSS+IN+L+ +V V G T+ Q
Sbjct: 248 GAENLIKLLKNYSRSHELKLAITVGIVGLPNVGKSSLINSLKRSRVVNVGSTPGVTRSMQ 307
Query: 196 YITLMKRIFLIDCPGVV 246
+ L K++ L+DCPGVV
Sbjct: 308 EVQLDKKVKLLDCPGVV 324
Score = 58.0 bits (134), Expect = 6e-09
Identities = 29/88 (32%), Positives = 48/88 (54%)
Frame = +3
Query: 246 LSIAETDTEKVLKGVVRVELVQNPDDYIEEVIKRVRKEYLVKTYKVDGWETATEFLEKLA 425
L + + L+ RVE +++P ++E++ E L+ Y+V + + +FL+K+A
Sbjct: 326 LKSSNSGVSVALRNCKRVEKMEDPISPVKEILDLCPHEKLLSLYRVPTFTSVDDFLQKVA 385
Query: 426 ARTGKLLKKGEPDVNQVARMVLNDWQRG 509
GKL K G DV AR+VL+DW G
Sbjct: 386 TLRGKLKKGGIVDVEAAARIVLHDWNEG 413
>03_05_0491 -
24868261-24869383,24869482-24869561,24870193-24870249,
24870567-24870660,24871013-24871099,24871188-24871347,
24871440-24871674
Length = 611
Score = 69.7 bits (163), Expect = 2e-12
Identities = 30/68 (44%), Positives = 44/68 (64%)
Frame = +1
Query: 73 KQISVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGETKVWQYITLMKRIFLIDCPGVVYP 252
K + VGF+GYPNVGKSS IN L +K V G+TK +Q + + + + L DCPG+V+P
Sbjct: 329 KHVVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLVISEELILCDCPGLVFP 388
Query: 253 SLKQTQRK 276
S ++ +
Sbjct: 389 SFSSSRHE 396
>12_02_1133 -
26368323-26369457,26369556-26369635,26370145-26370201,
26370508-26370601,26371006-26371092,26371179-26371268,
26371396-26371649
Length = 598
Score = 68.5 bits (160), Expect = 4e-12
Identities = 30/68 (44%), Positives = 44/68 (64%)
Frame = +1
Query: 73 KQISVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGETKVWQYITLMKRIFLIDCPGVVYP 252
K + VGF+GYPNVGKSS IN L +K V G+TK +Q + + + + L DCPG+V+P
Sbjct: 312 KHVVVGFVGYPNVGKSSTINALVGEKKTGVTHTPGKTKHFQTLIISEELTLCDCPGLVFP 371
Query: 253 SLKQTQRK 276
S ++ +
Sbjct: 372 SFSSSRHE 379
>05_04_0401 -
20982923-20983106,20983129-20983186,20983322-20983503,
20983637-20983752,20984148-20984234,20984334-20984477,
20984556-20984672,20984790-20984936,20985717-20985938,
20986919-20987072,20987583-20987632,20987870-20987921,
20987985-20988211
Length = 579
Score = 55.2 bits (127), Expect = 4e-08
Identities = 22/58 (37%), Positives = 37/58 (63%)
Frame = +1
Query: 73 KQISVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGETKVWQYITLMKRIFLIDCPGVV 246
+ + G +GYPNVGKSS+IN L +++C AP G T+ +++ + L+D PG++
Sbjct: 399 RAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWVRFGSDLELLDSPGIL 456
>08_01_0709 +
6265949-6266452,6267697-6267786,6268257-6268402,
6268534-6268710,6268774-6268840,6268949-6269056,
6269718-6269732
Length = 368
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +1
Query: 67 DKKQISVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGET--KVWQYITL-MKRIFLIDCP 237
D+ +SVG +G PN GKSS+ NT+ KV V+ T ++ +T + +I D P
Sbjct: 145 DQMSLSVGIVGAPNAGKSSLTNTMVGTKVAAVSRKTNTTTHEILGVLTKGITQICFFDTP 204
Query: 238 GVV 246
G++
Sbjct: 205 GLM 207
>03_06_0449 -
34013973-34014056,34014595-34014630,34014729-34014816,
34015034-34015143,34015611-34015715,34015812-34015903,
34016145-34016232,34016407-34016526,34016603-34016721,
34017253-34018126
Length = 571
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 85 VGFIGYPNVGKSSVINTL-RSKKVCKVAPIAGETKVWQYITLMKRIFLIDCPG 240
+ F G NVGKSS++N L R V + + G T+ + L ++ L+D PG
Sbjct: 397 IAFAGVSNVGKSSLLNALTRQWGVVRTSDKPGLTQTINFFRLASKLCLVDLPG 449
>03_02_0267 +
6990674-6990890,6991692-6991761,6991824-6991913,
6992635-6992797,6992910-6993137
Length = 255
Score = 37.1 bits (82), Expect = 0.011
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +1
Query: 67 DKKQISVGFIGYPNVGKSSVINTL-RSKKVCKVAPIAGETKVWQYITLMKRIFLIDCPG 240
D+ + +V +G NVGKSS+IN L R K+ + G+T+ + + K +L+D PG
Sbjct: 38 DRPEFAV--LGRSNVGKSSLINALIRRKEAALTSKKPGKTQTINHFLVNKSWYLVDLPG 94
>01_01_0879 +
6896587-6896701,6896819-6897005,6897475-6897774,
6897877-6898133,6898596-6898825,6899122-6899247,
6900195-6900374,6901079-6901216,6901515-6901670,
6902409-6902699,6902923-6903162
Length = 739
Score = 36.7 bits (81), Expect = 0.015
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +1
Query: 70 KKQISVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGETK---VWQYITLMKRIFLIDCPG 240
K + + +G PNVGKS+++NTL ++ V P AG T+ Q+ + ++L+D G
Sbjct: 309 KLPLQLAIVGRPNVGKSTLLNTLLQEQRVLVGPEAGLTRDSIRTQFQFDNRTVYLVDTAG 368
Query: 241 VVYPSLKQ 264
+ S K+
Sbjct: 369 WMERSGKE 376
>11_06_0499 +
24354810-24355212,24355677-24355735,24355846-24355929,
24356040-24356337,24357026-24357203,24357686-24357746,
24358209-24358391,24358581-24358742,24358844-24359037,
24359354-24359504,24359551-24359578,24359845-24360117,
24360660-24360724
Length = 712
Score = 36.3 bits (80), Expect = 0.020
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +1
Query: 82 SVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGETK 186
++ +G PNVGKSS++N L + V+P++G T+
Sbjct: 375 AIAIVGRPNVGKSSILNALVGEDRTIVSPVSGTTR 409
>11_04_0165 +
14305885-14306007,14306538-14306642,14306792-14306869,
14307710-14307757,14308173-14308314,14308394-14308464,
14309210-14309306,14309517-14309728,14311995-14312267
Length = 382
Score = 34.7 bits (76), Expect = 0.061
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 13/68 (19%)
Frame = +1
Query: 94 IGYPNVGKSSVINTLR-----------SKKVCKVAPIAGETK-VWQY-ITLMKRIFLIDC 234
+G PNVGKS++IN++ K V P+ G T+ + Y I+ I+++D
Sbjct: 142 VGVPNVGKSALINSIHRIVTSRFPVQDKNKRATVGPLPGVTQDIAGYKISSQPSIYVLDT 201
Query: 235 PGVVYPSL 258
PGV+ PS+
Sbjct: 202 PGVLVPSI 209
>01_01_0850 - 6641980-6642163,6642791-6644091
Length = 494
Score = 34.7 bits (76), Expect = 0.061
Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +3
Query: 288 VVRVELVQNPDDYI--EEVIKRVRKEYLVKTYKVDGWETATEFLEKLAARTGKLLKKGEP 461
VV E+ + DD I EV+K++RKE + K G T A R L KG+P
Sbjct: 233 VVVTEIESSDDDMIPIREVVKKMRKE---RASKGGGGFGETNGSSTPATRRSARLAKGQP 289
Query: 462 DVNQVARMVLNDWQRGNC 515
Q AR VLN + +C
Sbjct: 290 KRAQSARRVLNFVEPKDC 307
>08_02_0627 +
19449196-19449651,19449723-19449861,19450260-19450381,
19450685-19450888,19450981-19451040,19451628-19451820,
19451880-19451998,19452189-19452413,19452534-19452728
Length = 570
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +1
Query: 79 ISVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGETK 186
+ V IG PNVGKSS++N + V IAG T+
Sbjct: 306 LQVAIIGRPNVGKSSLLNAWSKSERAIVTEIAGTTR 341
>07_01_0075 - 558829-560859
Length = 676
Score = 31.5 bits (68), Expect = 0.57
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +1
Query: 64 IDKKQISVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGETK---VWQYITLMKRIFLIDC 234
ID ++ GYPNVGKSS +N + V V P A TK V R +ID
Sbjct: 164 IDPNTRTLLICGYPNVGKSSFMNKITRADV-DVQPYAFTTKSLFVGHADYKYLRYQVIDT 222
Query: 235 PGVV 246
PG++
Sbjct: 223 PGIL 226
>06_01_0668 - 4882174-4884204
Length = 676
Score = 31.5 bits (68), Expect = 0.57
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +1
Query: 64 IDKKQISVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGETK---VWQYITLMKRIFLIDC 234
ID ++ GYPNVGKSS +N + V V P A TK V R +ID
Sbjct: 164 IDPNTRTLLICGYPNVGKSSFMNKITRADV-DVQPYAFTTKSLFVGHADYKYLRYQVIDT 222
Query: 235 PGVV 246
PG++
Sbjct: 223 PGIL 226
>08_02_1073 -
24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 30.7 bits (66), Expect = 0.99
Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 9/94 (9%)
Frame = +3
Query: 258 ETDTEKVLKGVVRVELVQNPDDYIEEVIKRVRKEYLVKTYK------VDGWE---TATEF 410
ETD EK+L ++ LV PDD E R + LVK Y + W+ E
Sbjct: 505 ETDPEKMLTRGTQITLVLRPDDKF-EFADPGRIQGLVKNYSQFVSFPIYTWQEKSRTVEV 563
Query: 411 LEKLAARTGKLLKKGEPDVNQVARMVLNDWQRGN 512
E A+ G+ K+GE + DW+ N
Sbjct: 564 EEDEEAKEGEEAKEGEQKKKKTITEKYWDWELAN 597
>08_01_0387 -
3426058-3426168,3426279-3426473,3426612-3426724,
3427121-3427157,3427270-3427341,3427849-3427962,
3428129-3428200,3428343-3428381,3429340-3429414,
3429561-3429674,3429749-3429813,3429927-3430047,
3430942-3431063,3431547-3431634
Length = 445
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +1
Query: 28 LINLLRQFGKLHIDKKQI-SVGFIGYPNVGKSSVINTLRSKK--VCKVAPIAGETKVWQY 198
L+N+ + + + I ++ +G PNVGKSS++ L S K VC +
Sbjct: 227 LVNIAKTLRSMPVVDPHIPTLCLVGSPNVGKSSLVRILSSGKPEVCSYPFTTRGILMGHI 286
Query: 199 ITLMKRIFLIDCPGVV 246
++ +R + D PG++
Sbjct: 287 VSNHERFQVTDTPGLL 302
>07_03_1353 -
25966332-25966421,25966477-25966528,25966612-25966803,
25966900-25967199,25967816-25967925,25968696-25968755,
25968835-25968906,25969172-25969348,25969845-25969898,
25970188-25970217,25970985-25971026
Length = 392
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +1
Query: 85 VGFIGYPNVGKSSVINTLRSKKVCKVAPIAGETKVWQYITLM---KRIFLIDCPGVV 246
VG +G+P+VGKS+++N L + +VA T +M +I L+D PG++
Sbjct: 78 VGLVGFPSVGKSTLLNKL-TGTFSEVAAYEFTTLTCIPGVIMYKGAKIQLLDLPGII 133
>10_08_1002 +
22160109-22160264,22160374-22160484,22160612-22160689,
22160774-22160921,22161007-22161077,22161430-22161526,
22161603-22161790,22161960-22162223
Length = 370
Score = 29.5 bits (63), Expect = 2.3
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 13/70 (18%)
Frame = +1
Query: 82 SVGFIGYPNVGKSSVINTLR--------SKKVCKVAPIA---GETK-VWQY-ITLMKRIF 222
+V +G PNVGKS+++N + K K A ++ GETK + Y + I+
Sbjct: 137 TVLLVGIPNVGKSAIVNAMHRIGRIGAAEKGKLKHAIVSSHPGETKDISGYKVASHPNIY 196
Query: 223 LIDCPGVVYP 252
++D PGV+ P
Sbjct: 197 VLDTPGVLSP 206
>05_07_0147 -
28022018-28022104,28022207-28022287,28022513-28022614,
28022701-28022799,28023060-28023185,28023272-28023385,
28023478-28023618,28023717-28023862,28024011-28024386
Length = 423
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +1
Query: 85 VGFIGYPNVGKSSVINTLRSKKVCKVA--PIAGETKVWQYITLMK-RIFLIDCPGVV 246
V +G PNVGKS++IN + +K+ V P ++ + + +I L D PGV+
Sbjct: 128 VAVLGKPNVGKSTLINQIVGQKLSIVTDKPQTTRHRILGICSEPEYQIILYDTPGVI 184
>08_01_0610 -
5367271-5367312,5367737-5367805,5368208-5368360,
5368441-5368548,5368689-5368736,5368868-5369083,
5369195-5369259,5369478-5369602,5369675-5369793
Length = 314
Score = 28.7 bits (61), Expect = 4.0
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = +3
Query: 234 SGCCLSIAETDTEKVLKGVVRVELVQNPDDYIEEVIKR-VRKEYLVKT-YKVDGWETATE 407
S CC I + V G + Q+PD Y+ E+I+R E L + +V + + +
Sbjct: 113 SSCCCKITR-EPGPVKGGSTVIAFAQDPDGYMFELIQRGPTPEPLCQVMLRVGDLDRSIK 171
Query: 408 FLEKLAARTGKLLKKGEPDVNQVARMV 488
F EK A L KK PD M+
Sbjct: 172 FYEK-ALGMKLLRKKDVPDYKYTIAML 197
>12_01_0203 +
1520079-1520302,1522346-1522405,1522794-1523016,
1523038-1523434,1523522-1523781,1523866-1524011,
1524044-1524317,1524501-1525547
Length = 876
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = -3
Query: 532 WSYIERQFPLCQSLRTILATWLTSGSPFFNNFPVLAASFSKNSVAVS 392
W Y+ F + ++L+ IL ++ G FN + A+ +K + +S
Sbjct: 224 WVYVSEDFTIKRTLQEILHSFQGHGGAIFNGDESMEATITKLRIKIS 270
>03_05_0693 +
26810711-26810786,26810915-26810992,26811659-26811821,
26811889-26811923,26812179-26812343,26813458-26813504,
26814166-26814333,26816024-26816134,26816413-26816538,
26816935-26817087,26819060-26819173,26819882-26820052,
26820140-26820219,26820648-26820786
Length = 541
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 524 HRKAISSLPIIKDHPCNLVNIR 459
H K+ S+P IKD PC+ VN R
Sbjct: 365 HGKSRCSMPKIKDEPCSKVNDR 386
>01_06_1258 +
35806557-35806932,35807517-35807679,35807789-35807837,
35807943-35808866,35808954-35809049,35809142-35809257,
35809345-35809447,35809570-35809658,35809750-35809900,
35809995-35810141,35810238-35810366,35810451-35810529,
35810616-35810725
Length = 843
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -3
Query: 607 LLFFVCNFNSFFILCLLREWYFKSLWSYI 521
L + + +S+FI L REWY K+ W Y+
Sbjct: 482 LAYVLLVVHSYFIF-LTREWYKKTTWMYL 509
>01_01_1188 -
9446764-9446943,9447030-9447232,9447307-9447438,
9447570-9447657,9447723-9447950,9449542-9449763
Length = 350
Score = 28.3 bits (60), Expect = 5.3
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Frame = +3
Query: 192 AVYHLNEENILD*LSGCCLSIAETDTEKVLK-GVVRVELVQNP-----DDYIEEVIKRVR 353
AVY EE ++ L+ + D EKV K + V + ++P + Y+ I
Sbjct: 118 AVYKRFEEEVMQTLNCDIFYCGDVDAEKVYKIKLQEVRIRRHPVLSCTEKYLTSTISNQS 177
Query: 354 KEYLVKTYKVDGWETATEFLEKLAARTGKLLK-KGEPDVN 470
+ + + +T EKLA LK +G+PD++
Sbjct: 178 RNTCRAAKSEETYSMSTNCAEKLAEDIENFLKIRGDPDLD 217
>10_01_0108 + 1337009-1338190
Length = 393
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -3
Query: 553 EWYFKSLWSYIERQFPLCQSLRTILATWL 467
E ++ +W+ I+R+ CQS TI +WL
Sbjct: 353 EKHYLPIWNIIDRRCMQCQSEDTIALSWL 381
>09_04_0657 +
19271266-19271388,19271906-19271910,19272005-19272067,
19272150-19272256,19272321-19272418,19273070-19273162,
19273279-19273320,19273464-19273619
Length = 228
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +3
Query: 303 LVQNPDDYIEEVIKRVRKEYLVK-TYKVDGWETATEFLEKLAARTGKLLKKGEPDVNQVA 479
+V NP DY+E + K + D W+ + ++ R G L+ G P V +V
Sbjct: 72 MVTNPSDYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPGVSLRPGTP-VEEVF 130
Query: 480 RMV 488
+V
Sbjct: 131 PLV 133
>08_02_0225 +
14469037-14469064,14470004-14470215,14470324-14470433,
14470498-14470765,14470878-14471087,14471162-14471230,
14473346-14473591,14473672-14473740,14473808-14473871,
14474468-14474583
Length = 463
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +3
Query: 234 SGCCLSIAETDTEKVLKGVVRVELVQNPDDYIEEVIKRVRKEY 362
S C+ I T E ++K V RV NPD E K+V KE+
Sbjct: 366 SSDCIEILHT--ESLIKEVERVFSASNPDPLEMEKAKKVLKEH 406
>08_01_0466 + 4105524-4105812,4105975-4106356,4107042-4109073
Length = 900
Score = 27.9 bits (59), Expect = 7.0
Identities = 9/40 (22%), Positives = 23/40 (57%)
Frame = +1
Query: 28 LINLLRQFGKLHIDKKQISVGFIGYPNVGKSSVINTLRSK 147
+IN+L + +H+ K+ + +G+ +GK+++ + K
Sbjct: 125 IINMLSPWNDIHLSDKKKIISIVGFGGLGKTTLAKAVYDK 164
>05_02_0117 - 6779121-6779582
Length = 153
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 252 IAETDTEKVLKGVVRV-ELVQNPDDYIEEVIKRVRKEYLVKTYKV 383
++E EK K V++ L++ DD EE K+VRKE Y+V
Sbjct: 73 LSEEWVEKNSKSVIKTANLLKKADDSFEEFQKQVRKEVEKGYYEV 117
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,084,871
Number of Sequences: 37544
Number of extensions: 257969
Number of successful extensions: 725
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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