Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060691.seq
         (627 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    26   0.85 
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    26   0.85 
AY255857-1|AAP13483.1|  216|Anopheles gambiae glutathione tranfe...    23   6.0  

>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 26.2 bits (55), Expect = 0.85
 Identities = 10/44 (22%), Positives = 21/44 (47%)
 Frame = +1

Query: 70  KKQISVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGETKVWQYI 201
           K+ +  G I +  V      NT    ++ ++ P+A +  VW ++
Sbjct: 234 KEDLDAGLIPFYVVATLGTTNTCAFDRLDEIGPVANQYNVWVHV 277


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 26.2 bits (55), Expect = 0.85
 Identities = 10/44 (22%), Positives = 21/44 (47%)
 Frame = +1

Query: 70  KKQISVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGETKVWQYI 201
           K+ +  G I +  V      NT    ++ ++ P+A +  VW ++
Sbjct: 265 KEDLDAGLIPFYVVATLGTTNTCAFDRLDEIGPVANQYNVWVHV 308


>AY255857-1|AAP13483.1|  216|Anopheles gambiae glutathione
           tranferase d9 protein.
          Length = 216

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 321 DYIEEVIKRVRKEYLVKTYKVDG 389
           DY+    K++  ++ V T  VDG
Sbjct: 37  DYVNPAFKKINPQHTVPTLVVDG 59


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,406
Number of Sequences: 2352
Number of extensions: 10760
Number of successful extensions: 50
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)