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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060691.seq
         (627 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g52980.1 68414.m05995 GTP-binding family protein contains Pfa...   144   3e-35
At3g07050.1 68416.m00837 GTP-binding family protein contains Pfa...    74   7e-14
At2g27200.1 68415.m03269 GTP-binding family protein contains Pfa...    69   3e-12
At1g08410.1 68414.m00930 GTP-binding family protein contains Pfa...    67   1e-11
At4g02790.1 68417.m00379 GTP-binding family protein contains Pfa...    61   5e-10
At5g11480.1 68418.m01340 expressed protein                             41   8e-04
At2g22870.1 68415.m02715 expressed protein                             40   0.002
At3g12080.1 68416.m01504 GTP-binding family protein contains Pfa...    36   0.017
At1g02280.1 68414.m00169 GTP-binding protein (TOC33) identical t...    36   0.029
At5g58370.2 68418.m07309 expressed protein                             35   0.038
At5g58370.1 68418.m07308 expressed protein                             35   0.038
At5g39960.1 68418.m04846 GTP-binding family protein contains Pfa...    34   0.067
At1g30960.1 68414.m03791 GTP-binding protein (ERG) identical to ...    34   0.067
At2g41670.1 68415.m05148 GTP-binding family protein contains Pfa...    33   0.21 
At1g78010.1 68414.m09091 tRNA modification GTPase, putative simi...    33   0.21 
At1g50920.1 68414.m05725 GTP-binding protein-related similar to ...    32   0.27 
At1g33530.1 68414.m04149 F-box family protein contains F-box dom...    32   0.36 
At1g30580.1 68414.m03741 expressed protein                             31   0.47 
At3g01850.2 68416.m00129 ribulose-phosphate 3-epimerase, cytosol...    31   0.83 
At3g01850.1 68416.m00128 ribulose-phosphate 3-epimerase, cytosol...    31   0.83 
At4g39520.1 68417.m05588 GTP-binding protein, putative similar t...    29   1.9  
At3g10920.1 68416.m01317 superoxide dismutase [Mn], mitochondria...    29   1.9  
At1g80770.1 68414.m09476 expressed protein                             29   1.9  
At1g07630.1 68414.m00818 protein phosphatase 2C family protein /...    29   1.9  
At5g55300.1 68418.m06891 DNA topoisomerase I identical to Swiss-...    29   2.5  
At5g66470.1 68418.m08382 expressed protein                             28   5.8  
At4g28740.1 68417.m04110 expressed protein                             28   5.8  
At3g20740.1 68416.m02624 fertilization-independent endosperm pro...    28   5.8  
At1g07620.1 68414.m00817 GTP1/OBG family protein similar to SP|P...    28   5.8  
At5g44870.1 68418.m05501 disease resistance protein (TIR-NBS-LRR...    27   7.7  
At3g51570.1 68416.m05648 disease resistance protein (TIR-NBS-LRR...    27   7.7  
At3g24430.1 68416.m03066 expressed protein contains Pfam profile...    27   7.7  
At1g67460.1 68414.m07681 hypothetical protein contains Pfam doma...    27   7.7  
At1g48110.1 68414.m05369 expressed protein contains Pfam profile...    27   7.7  
At1g09180.1 68414.m01025 GTP-binding protein, putative strong si...    27   7.7  

>At1g52980.1 68414.m05995 GTP-binding family protein contains Pfam
           domain, PF01926: GTPase of unknown function
          Length = 576

 Score =  144 bits (350), Expect = 3e-35
 Identities = 66/84 (78%), Positives = 75/84 (89%)
 Frame = +1

Query: 4   HEPFGKGSLINLLRQFGKLHIDKKQISVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGET 183
           ++ FGKGSL+++LRQF +L  DK+ ISVGF+GYPNVGKSSVINTLR+K VCKVAPI GET
Sbjct: 285 NKSFGKGSLLSVLRQFARLKSDKQAISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGET 344

Query: 184 KVWQYITLMKRIFLIDCPGVVYPS 255
           KVWQYITL KRIFLIDCPGVVY S
Sbjct: 345 KVWQYITLTKRIFLIDCPGVVYQS 368



 Score = 94.3 bits (224), Expect = 6e-20
 Identities = 42/84 (50%), Positives = 63/84 (75%)
 Frame = +3

Query: 258 ETDTEKVLKGVVRVELVQNPDDYIEEVIKRVRKEYLVKTYKVDGWETATEFLEKLAARTG 437
           +T+T+ VLKGVVRV  +++  ++I EV++RV+KE+L + YK+  WE   +FL +L   +G
Sbjct: 370 DTETDIVLKGVVRVTNLEDASEHIGEVLRRVKKEHLQRAYKIKDWEDDHDFLLQLCKSSG 429

Query: 438 KLLKKGEPDVNQVARMVLNDWQRG 509
           KLLK GEPD+   A+M+L+DWQRG
Sbjct: 430 KLLKGGEPDLMTGAKMILHDWQRG 453


>At3g07050.1 68416.m00837 GTP-binding family protein contains Pfam
           domain, PF01926: GTPase of unknown function
          Length = 582

 Score = 74.1 bits (174), Expect = 7e-14
 Identities = 37/77 (48%), Positives = 49/77 (63%)
 Frame = +1

Query: 16  GKGSLINLLRQFGKLHIDKKQISVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGETKVWQ 195
           G  +LI LL+ + + H  KK I+VG IG PNVGKSS+IN+L+   V  V    G T+  Q
Sbjct: 233 GADTLIKLLKNYSRSHELKKSITVGIIGLPNVGKSSLINSLKRAHVVNVGATPGLTRSLQ 292

Query: 196 YITLMKRIFLIDCPGVV 246
            + L K + L+DCPGVV
Sbjct: 293 EVHLDKNVKLLDCPGVV 309



 Score = 68.1 bits (159), Expect = 4e-12
 Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
 Frame = +3

Query: 183 KSLAVYHLNEE-NILD*LSGCCLSIAETDTEKVLKGVVRVELVQNPDDYIEEVIKRVRKE 359
           +SL   HL++   +LD      L  +  D    L+   R+E + +P   ++E++K   K+
Sbjct: 289 RSLQEVHLDKNVKLLDCPGVVMLKSSGNDASIALRNCKRIEKLDDPVSPVKEILKLCPKD 348

Query: 360 YLVKTYKVDGWETATEFLEKLAARTGKLLKKGEPDVNQVARMVLNDWQRG 509
            LV  YK+  +E   +FL K+A   GKL K G  D++  AR+VL+DW  G
Sbjct: 349 MLVTLYKIPSFEAVDDFLYKVATVRGKLKKGGLVDIDAAARIVLHDWNEG 398


>At2g27200.1 68415.m03269 GTP-binding family protein contains Pfam
           domain, PF01926: GTPase of unknown function
          Length = 537

 Score = 68.5 bits (160), Expect = 3e-12
 Identities = 30/66 (45%), Positives = 44/66 (66%)
 Frame = +1

Query: 73  KQISVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGETKVWQYITLMKRIFLIDCPGVVYP 252
           +Q+ VGF+GYPNVGKSS IN L  +K   V    G+TK +Q + + + + L DCPG+V+P
Sbjct: 303 EQVVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISEDLMLCDCPGLVFP 362

Query: 253 SLKQTQ 270
           S   ++
Sbjct: 363 SFSSSR 368


>At1g08410.1 68414.m00930 GTP-binding family protein contains Pfam
           domain, PF01926: GTPase of unknown function
          Length = 589

 Score = 66.9 bits (156), Expect = 1e-11
 Identities = 30/67 (44%), Positives = 42/67 (62%)
 Frame = +1

Query: 70  KKQISVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGETKVWQYITLMKRIFLIDCPGVVY 249
           + Q  VGF+GYPNVGKSS IN L  +K   V    G+TK +Q + +   + L DCPG+V+
Sbjct: 306 RDQAVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISDELMLCDCPGLVF 365

Query: 250 PSLKQTQ 270
           PS   ++
Sbjct: 366 PSFSSSR 372


>At4g02790.1 68417.m00379 GTP-binding family protein contains Pfam
           domain, PF01926: GTPase of unknown function
          Length = 372

 Score = 61.3 bits (142), Expect = 5e-10
 Identities = 26/58 (44%), Positives = 39/58 (67%)
 Frame = +1

Query: 73  KQISVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGETKVWQYITLMKRIFLIDCPGVV 246
           + +  G IGYPNVGKSS+IN L  +K+C  AP  G T+  +++ L K + L+D PG++
Sbjct: 212 RSVRAGIIGYPNVGKSSLINRLLKRKICAAAPRPGVTREMKWVKLGKDLDLLDSPGML 269


>At5g11480.1 68418.m01340 expressed protein
          Length = 318

 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
 Frame = +1

Query: 94  IGYPNVGKSSVINTL-RSKKVCKVAPIAGETKVWQYITLMKRIFLIDCPGVVYPS----L 258
           +G  NVGKSS++N+L R K++   +   G+T+   +  +  + +L+D PG  Y S    L
Sbjct: 141 VGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFRINDKWYLVDLPGYGYASAPHEL 200

Query: 259 KQTQRKY*KE 288
           KQ   K+ K+
Sbjct: 201 KQDWNKFTKD 210


>At2g22870.1 68415.m02715 expressed protein
          Length = 300

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
 Frame = +1

Query: 67  DKKQISVGFIGYPNVGKSSVINTL-RSKKVCKVAPIAGETKVWQYITLMKRIFLIDCPG 240
           D+ +I++  +G  NVGKSS+IN L R K+V   +   G+T++  +  + K  +++D PG
Sbjct: 119 DRPEIAI--LGRSNVGKSSLINCLVRKKEVALTSKKPGKTQLINHFLVNKSWYIVDLPG 175


>At3g12080.1 68416.m01504 GTP-binding family protein contains Pfam
           domain, PF01926: GTPase of unknown function
          Length = 663

 Score = 36.3 bits (80), Expect = 0.017
 Identities = 15/35 (42%), Positives = 24/35 (68%)
 Frame = +1

Query: 82  SVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGETK 186
           ++  IG PNVGKSS++N L  +    V+P++G T+
Sbjct: 370 AIAIIGRPNVGKSSILNALVREDRTIVSPVSGTTR 404


>At1g02280.1 68414.m00169 GTP-binding protein (TOC33) identical to
           atToc33 protein (GI:11557973) [Arabidopsis thaliana];
           Carboxyl-terminal end highly similar to GTP-binding
           protein SP:U43377, location of EST gb|AA394770 and
           gb|R30089; identical to cDNA for chloroplast atToc33
           protein GI:11557972
          Length = 297

 Score = 35.5 bits (78), Expect = 0.029
 Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
 Frame = +1

Query: 37  LLRQFGKL-HIDKKQISVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGE--TKVWQYITL 207
           L+  FGKL   D   ++V  +G   VGKSS +N+L  ++V +V+P   E    V    T+
Sbjct: 22  LIEFFGKLKQKDMNSMTVLVLGKGGVGKSSTVNSLIGEQVVRVSPFQAEGLRPVMVSRTM 81

Query: 208 MK-RIFLIDCPGVV 246
               I +ID PG+V
Sbjct: 82  GGFTINIIDTPGLV 95


>At5g58370.2 68418.m07309 expressed protein
          Length = 465

 Score = 35.1 bits (77), Expect = 0.038
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +1

Query: 85  VGFIGYPNVGKSSVINTL-RSKKVCKVAPIAGETKVWQYITLMKRIFLIDCPG 240
           + F G  NVGKSS++N L R   V + +   G T+   +  L  ++ L+D PG
Sbjct: 291 IAFAGRSNVGKSSLLNALTRQWGVVRTSDKPGLTQTINFFGLGPKVRLVDLPG 343


>At5g58370.1 68418.m07308 expressed protein
          Length = 446

 Score = 35.1 bits (77), Expect = 0.038
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +1

Query: 85  VGFIGYPNVGKSSVINTL-RSKKVCKVAPIAGETKVWQYITLMKRIFLIDCPG 240
           + F G  NVGKSS++N L R   V + +   G T+   +  L  ++ L+D PG
Sbjct: 291 IAFAGRSNVGKSSLLNALTRQWGVVRTSDKPGLTQTINFFGLGPKVRLVDLPG 343


>At5g39960.1 68418.m04846 GTP-binding family protein contains Pfam
           domain, PF01926: GTPase of unknown function
          Length = 616

 Score = 34.3 bits (75), Expect = 0.067
 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = +1

Query: 70  KKQISVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGETK---VWQYITLMKRIFLIDCPG 240
           K  + +  +G PNVGKS+++N L  ++   V P AG T+     Q+    + ++L+D  G
Sbjct: 310 KLPLQLAIVGKPNVGKSTLLNALLEEERVLVGPEAGLTRDAVRVQFEFQGRTVYLVDTAG 369


>At1g30960.1 68414.m03791 GTP-binding protein (ERG) identical to
           GTP-binding protein ERG SP:O82653 from [Arabidopsis
           thaliana]
          Length = 437

 Score = 34.3 bits (75), Expect = 0.067
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +1

Query: 67  DKKQISVGFIGYPNVGKSSVINTLRSKKV 153
           D+K ++VG IG PN GKSS+ N +   KV
Sbjct: 150 DQKSLNVGIIGPPNAGKSSLTNFMVGTKV 178


>At2g41670.1 68415.m05148 GTP-binding family protein contains Pfam
           domain, PF01926: GTPase of unknown function
          Length = 386

 Score = 32.7 bits (71), Expect = 0.21
 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 13/68 (19%)
 Frame = +1

Query: 94  IGYPNVGKSSVINTLRS-----------KKVCKVAPIAGETKVWQYITLMKR--IFLIDC 234
           +G PNVGKS++IN++              K   V P+ G T+      +  R  I+++D 
Sbjct: 142 VGVPNVGKSALINSIHQIAAARFPVQERLKRATVGPLPGVTQDIAGFKIAHRPSIYVLDS 201

Query: 235 PGVVYPSL 258
           PGV+ PS+
Sbjct: 202 PGVLVPSI 209


>At1g78010.1 68414.m09091 tRNA modification GTPase, putative similar
           to tRNA modification GTPase trmE [strain PCC 7120,
           Anabaena sp.] SWISS-PROT:Q8YN91
          Length = 560

 Score = 32.7 bits (71), Expect = 0.21
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 79  ISVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGETK 186
           + +  +G PNVGKSS++N     +   V  +AG T+
Sbjct: 318 LQIAIVGRPNVGKSSLLNAWSKSERAIVTEVAGTTR 353


>At1g50920.1 68414.m05725 GTP-binding protein-related similar to
           GTP-binding protein SP:Q99ME9 from [Mus musculus]
          Length = 671

 Score = 32.3 bits (70), Expect = 0.27
 Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = +1

Query: 64  IDKKQISVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGETK---VWQYITLMKRIFLIDC 234
           ID    +V   GYPNVGKSS +N +    V  V P A  TK   V        R  +ID 
Sbjct: 164 IDPNTRTVLICGYPNVGKSSFMNKVTRADV-DVQPYAFTTKSLFVGHTDYKYLRYQVIDT 222

Query: 235 PGVV 246
           PG++
Sbjct: 223 PGIL 226


>At1g33530.1 68414.m04149 F-box family protein contains F-box domain
           Pfam:PF00646; contains TIGRFAM TIGR01640: F-box protein
           interaction domain
          Length = 441

 Score = 31.9 bits (69), Expect = 0.36
 Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
 Frame = +3

Query: 306 VQNPDDYIEEVIKRVRKEYLVKTYKVD-GWETATEFLEKLAARTGKLLKK 452
           V+ PD  +EE+++R+  +YLV+   +  GW++  E  + LA +  +LL+K
Sbjct: 95  VELPDVLVEEILQRLPVKYLVRLKSISKGWKSLIE-SDHLAEKHLRLLEK 143


>At1g30580.1 68414.m03741 expressed protein
          Length = 394

 Score = 31.5 bits (68), Expect = 0.47
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = +1

Query: 79  ISVGFIGYPNVGKSSVINTL 138
           + +G +G PNVGKS++ NTL
Sbjct: 25  LKIGIVGLPNVGKSTLFNTL 44


>At3g01850.2 68416.m00129 ribulose-phosphate 3-epimerase, cytosolic,
           putative / pentose-5-phosphate 3-epimerase, putative
           strong similarity to D-ribulose-5-phosphate 3-epimerase
           [Oryza sativa] GI:6007803; contains Pfam profile
           PF00834: Ribulose-phosphate 3 epimerase family; contains
           non-consensus splice sites at exon 1 and exon2
          Length = 225

 Score = 30.7 bits (66), Expect = 0.83
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
 Frame = +3

Query: 303 LVQNPDDYIEEVIKRVRKEYLVKTYKV-DGWETATEFLEKLAARTGKLLKKGEPDVNQVA 479
           +V NP DY+ ++ K     +        D W+   E ++    R G  LK G P V QV 
Sbjct: 69  MVTNPMDYVAQMAKAGASGFTFHVEVAQDNWQQLVEKIKSTGMRPGVALKPGTP-VEQVY 127

Query: 480 RMV 488
            +V
Sbjct: 128 PLV 130


>At3g01850.1 68416.m00128 ribulose-phosphate 3-epimerase, cytosolic,
           putative / pentose-5-phosphate 3-epimerase, putative
           strong similarity to D-ribulose-5-phosphate 3-epimerase
           [Oryza sativa] GI:6007803; contains Pfam profile
           PF00834: Ribulose-phosphate 3 epimerase family; contains
           non-consensus splice sites at exon 1 and exon2
          Length = 225

 Score = 30.7 bits (66), Expect = 0.83
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
 Frame = +3

Query: 303 LVQNPDDYIEEVIKRVRKEYLVKTYKV-DGWETATEFLEKLAARTGKLLKKGEPDVNQVA 479
           +V NP DY+ ++ K     +        D W+   E ++    R G  LK G P V QV 
Sbjct: 69  MVTNPMDYVAQMAKAGASGFTFHVEVAQDNWQQLVEKIKSTGMRPGVALKPGTP-VEQVY 127

Query: 480 RMV 488
            +V
Sbjct: 128 PLV 130


>At4g39520.1 68417.m05588 GTP-binding protein, putative similar to
           SP|Q9Y295 Developmentally regulated GTP-binding protein
           1 (DRG 1) {Homo sapiens}; contains Pfam profiles
           PF02824: TGS domain, PF01018: GTP1/OBG family
          Length = 369

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
 Frame = +1

Query: 85  VGFIGYPNVGKSSVINTLRSKKVCKVA--PIAGETKVWQYITLM-KRIFLIDCPGVV 246
           VG +G+P+VGKS+++N L +    +VA       T +   IT    +I L+D PG++
Sbjct: 68  VGLVGFPSVGKSTLLNKL-TGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPGII 123


>At3g10920.1 68416.m01317 superoxide dismutase [Mn], mitochondrial
           (SODA) / manganese superoxide dismutase (MSD1) identical
           to manganese superoxide dismutase [Arabidopsis thaliana]
           gi|3273751|gb|AAC24832
          Length = 231

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +3

Query: 342 KRVRKEYLVKTYKVDGWETATEFLEK 419
           K VR EYL   +KV  W+ A+E  EK
Sbjct: 203 KNVRPEYLKNVWKVINWKYASEVYEK 228


>At1g80770.1 68414.m09476 expressed protein
          Length = 451

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
 Frame = +1

Query: 64  IDKKQISVGFIGYPNVGKSSVINTLRSKK--VCKVAPIAGETKVWQYITL-MKRIFLIDC 234
           +D +  ++  +G PNVGKSS++  L + K  +C   P      +  +I L  +R  + D 
Sbjct: 249 VDLEMPTLCLVGAPNVGKSSLVRILSTGKPEICNY-PFTTRGILMGHIVLNYQRFQVTDT 307

Query: 235 PGVV 246
           PG++
Sbjct: 308 PGLL 311


>At1g07630.1 68414.m00818 protein phosphatase 2C family protein /
           PP2C family protein similar to protein phosphatase-2c
           (GI:3608412) [Mesembryanthemum crystallinum]; contains
           Pfam PF00481 : Protein phosphatase 2C domain
          Length = 662

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
 Frame = +3

Query: 159 SSPNCW*NKSLA-VYHLNEENILD*LSGCCLSIAETDTEKVLKGVVRVELVQNPDDYIEE 335
           S P+ W  K    +  +NEE +++ L GC     E D   ++  +   +L  +    IEE
Sbjct: 444 SEPDYWLAKIRQDLERINEETMMNDLEGC-----EGDQSSLVPNLSAFQLTVDHSTNIEE 498

Query: 336 VIKRVRKEY 362
            ++R+R E+
Sbjct: 499 EVERIRNEH 507


>At5g55300.1 68418.m06891 DNA topoisomerase I identical to
           Swiss-Prot:P30181 DNA topoisomerase I [Arabidopsis
           thaliana]
          Length = 916

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 18/64 (28%), Positives = 27/64 (42%)
 Frame = +3

Query: 273 KVLKGVVRVELVQNPDDYIEEVIKRVRKEYLVKTYKVDGWETATEFLEKLAARTGKLLKK 452
           K L    + E  +N  D+I+ +     K +  K  K+     AT  ++KLA R G     
Sbjct: 588 KGLSDKEKYEKARNLTDHIDNIRTTYTKNFTAKDVKMRQIAVATYLIDKLALRAGNEKDD 647

Query: 453 GEPD 464
            E D
Sbjct: 648 DEAD 651


>At5g66470.1 68418.m08382 expressed protein
          Length = 427

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
 Frame = +1

Query: 85  VGFIGYPNVGKSSVINTLRSKKVCKVA--PIAGETKVWQYITLMK-RIFLIDCPGVV 246
           V  +G PNVGKS++ N +  +K+  V   P     ++    +  + ++ L D PGV+
Sbjct: 132 VAVVGMPNVGKSTLSNQMIGQKISIVTDKPQTTRHRILGICSSPEYQMILYDTPGVI 188


>At4g28740.1 68417.m04110 expressed protein
          Length = 347

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 279 LKGVVRVELVQNPDDYIEEVIKRVRKEY 362
           L+GV R+ +   P ++IEE  KR  KEY
Sbjct: 204 LRGVARLVICAGPAEFIEEAFKR-SKEY 230


>At3g20740.1 68416.m02624 fertilization-independent endosperm
           protein (FIE) contains 6 WD-40 repeats (PF00400);
           identical to fertilization-independent endosperm protein
           (GI:4567095) [Arabidopsis thaliana]
          Length = 369

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
 Frame = -3

Query: 559 LREWYFKSLWSYIERQFPLCQSLRTILATWLTSGSPF---FNNFPVLAASFSKNSV 401
           ++ W  K  W+Y+E+ F           TW    S F   F  FPV  AS   N V
Sbjct: 199 IKIWSMKEFWTYVEKSF-----------TWTDDPSKFPTKFVQFPVFTASIHTNYV 243


>At1g07620.1 68414.m00817 GTP1/OBG family protein similar to
           SP|P20964 Spo0B-associated GTP-binding protein {Bacillus
           subtilis}; contains Pfam profile PF01018: GTP1/OBG
           family
          Length = 1016

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +1

Query: 37  LLRQFGKLHIDKKQIS-VGFIGYPNVGKSSVINTLRSKK 150
           LL     L ++ K I+ VG +G PN GKS+++  L   K
Sbjct: 812 LLGSEAVLILELKSIADVGLVGMPNAGKSTLLGALSRAK 850


>At5g44870.1 68418.m05501 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1170

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +1

Query: 4   HEPFGKGSLINLLRQFGKLHIDKKQI-SVGFIGYPNVGKSSVINTLRSK 147
           H P   G    L     KL  D  +  +VG +G P +GK+++  TL  K
Sbjct: 251 HPPPNYGIEPRLKEMEEKLDFDSLETKTVGIVGMPGIGKTTLAETLYRK 299


>At3g51570.1 68416.m05648 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1226

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +1

Query: 1   RHEPFGKGSLINLLRQFGKLHIDKKQISV-GFIGYPNVGKSSVINTLRSKKVCK 159
           +HE +G    +  L++  KL +D ++  + G +G P +GK+++   +     CK
Sbjct: 206 KHEIYGLKQRLEELKE--KLDLDCEETRILGVVGMPGIGKTTLAREIYETLRCK 257


>At3g24430.1 68416.m03066 expressed protein contains Pfam profile
           PF01883: Domain of unknown function
          Length = 532

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +1

Query: 1   RHEPFGKGSLINLLRQFGKLHI 66
           R+ PFGKGS   +++QFG  H+
Sbjct: 355 RYYPFGKGSGSEVVKQFGIPHL 376


>At1g67460.1 68414.m07681 hypothetical protein contains Pfam domain
           PF03193: Protein of unknown function, DUF258
          Length = 434

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
 Frame = +1

Query: 70  KKQISVGFIGYPNVGKSSVINTLRS---KKVCKVAPIAGETK-VWQYITLMKRI---FLI 228
           + Q SV  +G   VGKSS+IN LRS   + V +V+   G  K   + +TL+      +L 
Sbjct: 247 RNQTSV-IVGPSGVGKSSLINILRSSYDQSVGEVSHRNGRGKHTTRNVTLLPLCGGGYLA 305

Query: 229 DCPGV-VYPSLKQTQRK 276
           D PG   +  LK T++K
Sbjct: 306 DTPGFNKHKLLKVTKQK 322


>At1g48110.1 68414.m05369 expressed protein contains Pfam profile
           PF04146: YT521-B-like family
          Length = 639

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +2

Query: 509 KLPFYVAPEGFEVPLSKQTQDEKTVEVANEEEKITTETK 625
           K P  ++ +  E+P   +  +E TV+  NEE+  +T+ K
Sbjct: 521 KKPSVISAKTEELPSKSEGNEETTVKEGNEEDTSSTQKK 559


>At1g09180.1 68414.m01025 GTP-binding protein, putative strong
           similarity to SP:Q01474 GTP-binding protein SAR1B and
           SP:O04834 GTP-binding protein SAR1A [Arabidopsis
           thaliana]
          Length = 193

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 10/37 (27%), Positives = 24/37 (64%)
 Frame = +1

Query: 58  LHIDKKQISVGFIGYPNVGKSSVINTLRSKKVCKVAP 168
           L + KK+  + F+G  N GK+++++ L+ +++ +  P
Sbjct: 14  LGLCKKEAKILFLGLDNAGKTTLLHMLKDERLVQHQP 50


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,052,648
Number of Sequences: 28952
Number of extensions: 232653
Number of successful extensions: 748
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1275599520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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