BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV060691.seq (627 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g52980.1 68414.m05995 GTP-binding family protein contains Pfa... 144 3e-35 At3g07050.1 68416.m00837 GTP-binding family protein contains Pfa... 74 7e-14 At2g27200.1 68415.m03269 GTP-binding family protein contains Pfa... 69 3e-12 At1g08410.1 68414.m00930 GTP-binding family protein contains Pfa... 67 1e-11 At4g02790.1 68417.m00379 GTP-binding family protein contains Pfa... 61 5e-10 At5g11480.1 68418.m01340 expressed protein 41 8e-04 At2g22870.1 68415.m02715 expressed protein 40 0.002 At3g12080.1 68416.m01504 GTP-binding family protein contains Pfa... 36 0.017 At1g02280.1 68414.m00169 GTP-binding protein (TOC33) identical t... 36 0.029 At5g58370.2 68418.m07309 expressed protein 35 0.038 At5g58370.1 68418.m07308 expressed protein 35 0.038 At5g39960.1 68418.m04846 GTP-binding family protein contains Pfa... 34 0.067 At1g30960.1 68414.m03791 GTP-binding protein (ERG) identical to ... 34 0.067 At2g41670.1 68415.m05148 GTP-binding family protein contains Pfa... 33 0.21 At1g78010.1 68414.m09091 tRNA modification GTPase, putative simi... 33 0.21 At1g50920.1 68414.m05725 GTP-binding protein-related similar to ... 32 0.27 At1g33530.1 68414.m04149 F-box family protein contains F-box dom... 32 0.36 At1g30580.1 68414.m03741 expressed protein 31 0.47 At3g01850.2 68416.m00129 ribulose-phosphate 3-epimerase, cytosol... 31 0.83 At3g01850.1 68416.m00128 ribulose-phosphate 3-epimerase, cytosol... 31 0.83 At4g39520.1 68417.m05588 GTP-binding protein, putative similar t... 29 1.9 At3g10920.1 68416.m01317 superoxide dismutase [Mn], mitochondria... 29 1.9 At1g80770.1 68414.m09476 expressed protein 29 1.9 At1g07630.1 68414.m00818 protein phosphatase 2C family protein /... 29 1.9 At5g55300.1 68418.m06891 DNA topoisomerase I identical to Swiss-... 29 2.5 At5g66470.1 68418.m08382 expressed protein 28 5.8 At4g28740.1 68417.m04110 expressed protein 28 5.8 At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 28 5.8 At1g07620.1 68414.m00817 GTP1/OBG family protein similar to SP|P... 28 5.8 At5g44870.1 68418.m05501 disease resistance protein (TIR-NBS-LRR... 27 7.7 At3g51570.1 68416.m05648 disease resistance protein (TIR-NBS-LRR... 27 7.7 At3g24430.1 68416.m03066 expressed protein contains Pfam profile... 27 7.7 At1g67460.1 68414.m07681 hypothetical protein contains Pfam doma... 27 7.7 At1g48110.1 68414.m05369 expressed protein contains Pfam profile... 27 7.7 At1g09180.1 68414.m01025 GTP-binding protein, putative strong si... 27 7.7 >At1g52980.1 68414.m05995 GTP-binding family protein contains Pfam domain, PF01926: GTPase of unknown function Length = 576 Score = 144 bits (350), Expect = 3e-35 Identities = 66/84 (78%), Positives = 75/84 (89%) Frame = +1 Query: 4 HEPFGKGSLINLLRQFGKLHIDKKQISVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGET 183 ++ FGKGSL+++LRQF +L DK+ ISVGF+GYPNVGKSSVINTLR+K VCKVAPI GET Sbjct: 285 NKSFGKGSLLSVLRQFARLKSDKQAISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGET 344 Query: 184 KVWQYITLMKRIFLIDCPGVVYPS 255 KVWQYITL KRIFLIDCPGVVY S Sbjct: 345 KVWQYITLTKRIFLIDCPGVVYQS 368 Score = 94.3 bits (224), Expect = 6e-20 Identities = 42/84 (50%), Positives = 63/84 (75%) Frame = +3 Query: 258 ETDTEKVLKGVVRVELVQNPDDYIEEVIKRVRKEYLVKTYKVDGWETATEFLEKLAARTG 437 +T+T+ VLKGVVRV +++ ++I EV++RV+KE+L + YK+ WE +FL +L +G Sbjct: 370 DTETDIVLKGVVRVTNLEDASEHIGEVLRRVKKEHLQRAYKIKDWEDDHDFLLQLCKSSG 429 Query: 438 KLLKKGEPDVNQVARMVLNDWQRG 509 KLLK GEPD+ A+M+L+DWQRG Sbjct: 430 KLLKGGEPDLMTGAKMILHDWQRG 453 >At3g07050.1 68416.m00837 GTP-binding family protein contains Pfam domain, PF01926: GTPase of unknown function Length = 582 Score = 74.1 bits (174), Expect = 7e-14 Identities = 37/77 (48%), Positives = 49/77 (63%) Frame = +1 Query: 16 GKGSLINLLRQFGKLHIDKKQISVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGETKVWQ 195 G +LI LL+ + + H KK I+VG IG PNVGKSS+IN+L+ V V G T+ Q Sbjct: 233 GADTLIKLLKNYSRSHELKKSITVGIIGLPNVGKSSLINSLKRAHVVNVGATPGLTRSLQ 292 Query: 196 YITLMKRIFLIDCPGVV 246 + L K + L+DCPGVV Sbjct: 293 EVHLDKNVKLLDCPGVV 309 Score = 68.1 bits (159), Expect = 4e-12 Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 1/110 (0%) Frame = +3 Query: 183 KSLAVYHLNEE-NILD*LSGCCLSIAETDTEKVLKGVVRVELVQNPDDYIEEVIKRVRKE 359 +SL HL++ +LD L + D L+ R+E + +P ++E++K K+ Sbjct: 289 RSLQEVHLDKNVKLLDCPGVVMLKSSGNDASIALRNCKRIEKLDDPVSPVKEILKLCPKD 348 Query: 360 YLVKTYKVDGWETATEFLEKLAARTGKLLKKGEPDVNQVARMVLNDWQRG 509 LV YK+ +E +FL K+A GKL K G D++ AR+VL+DW G Sbjct: 349 MLVTLYKIPSFEAVDDFLYKVATVRGKLKKGGLVDIDAAARIVLHDWNEG 398 >At2g27200.1 68415.m03269 GTP-binding family protein contains Pfam domain, PF01926: GTPase of unknown function Length = 537 Score = 68.5 bits (160), Expect = 3e-12 Identities = 30/66 (45%), Positives = 44/66 (66%) Frame = +1 Query: 73 KQISVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGETKVWQYITLMKRIFLIDCPGVVYP 252 +Q+ VGF+GYPNVGKSS IN L +K V G+TK +Q + + + + L DCPG+V+P Sbjct: 303 EQVVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISEDLMLCDCPGLVFP 362 Query: 253 SLKQTQ 270 S ++ Sbjct: 363 SFSSSR 368 >At1g08410.1 68414.m00930 GTP-binding family protein contains Pfam domain, PF01926: GTPase of unknown function Length = 589 Score = 66.9 bits (156), Expect = 1e-11 Identities = 30/67 (44%), Positives = 42/67 (62%) Frame = +1 Query: 70 KKQISVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGETKVWQYITLMKRIFLIDCPGVVY 249 + Q VGF+GYPNVGKSS IN L +K V G+TK +Q + + + L DCPG+V+ Sbjct: 306 RDQAVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISDELMLCDCPGLVF 365 Query: 250 PSLKQTQ 270 PS ++ Sbjct: 366 PSFSSSR 372 >At4g02790.1 68417.m00379 GTP-binding family protein contains Pfam domain, PF01926: GTPase of unknown function Length = 372 Score = 61.3 bits (142), Expect = 5e-10 Identities = 26/58 (44%), Positives = 39/58 (67%) Frame = +1 Query: 73 KQISVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGETKVWQYITLMKRIFLIDCPGVV 246 + + G IGYPNVGKSS+IN L +K+C AP G T+ +++ L K + L+D PG++ Sbjct: 212 RSVRAGIIGYPNVGKSSLINRLLKRKICAAAPRPGVTREMKWVKLGKDLDLLDSPGML 269 >At5g11480.1 68418.m01340 expressed protein Length = 318 Score = 40.7 bits (91), Expect = 8e-04 Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 5/70 (7%) Frame = +1 Query: 94 IGYPNVGKSSVINTL-RSKKVCKVAPIAGETKVWQYITLMKRIFLIDCPGVVYPS----L 258 +G NVGKSS++N+L R K++ + G+T+ + + + +L+D PG Y S L Sbjct: 141 VGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFRINDKWYLVDLPGYGYASAPHEL 200 Query: 259 KQTQRKY*KE 288 KQ K+ K+ Sbjct: 201 KQDWNKFTKD 210 >At2g22870.1 68415.m02715 expressed protein Length = 300 Score = 39.5 bits (88), Expect = 0.002 Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%) Frame = +1 Query: 67 DKKQISVGFIGYPNVGKSSVINTL-RSKKVCKVAPIAGETKVWQYITLMKRIFLIDCPG 240 D+ +I++ +G NVGKSS+IN L R K+V + G+T++ + + K +++D PG Sbjct: 119 DRPEIAI--LGRSNVGKSSLINCLVRKKEVALTSKKPGKTQLINHFLVNKSWYIVDLPG 175 >At3g12080.1 68416.m01504 GTP-binding family protein contains Pfam domain, PF01926: GTPase of unknown function Length = 663 Score = 36.3 bits (80), Expect = 0.017 Identities = 15/35 (42%), Positives = 24/35 (68%) Frame = +1 Query: 82 SVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGETK 186 ++ IG PNVGKSS++N L + V+P++G T+ Sbjct: 370 AIAIIGRPNVGKSSILNALVREDRTIVSPVSGTTR 404 >At1g02280.1 68414.m00169 GTP-binding protein (TOC33) identical to atToc33 protein (GI:11557973) [Arabidopsis thaliana]; Carboxyl-terminal end highly similar to GTP-binding protein SP:U43377, location of EST gb|AA394770 and gb|R30089; identical to cDNA for chloroplast atToc33 protein GI:11557972 Length = 297 Score = 35.5 bits (78), Expect = 0.029 Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 4/74 (5%) Frame = +1 Query: 37 LLRQFGKL-HIDKKQISVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGE--TKVWQYITL 207 L+ FGKL D ++V +G VGKSS +N+L ++V +V+P E V T+ Sbjct: 22 LIEFFGKLKQKDMNSMTVLVLGKGGVGKSSTVNSLIGEQVVRVSPFQAEGLRPVMVSRTM 81 Query: 208 MK-RIFLIDCPGVV 246 I +ID PG+V Sbjct: 82 GGFTINIIDTPGLV 95 >At5g58370.2 68418.m07309 expressed protein Length = 465 Score = 35.1 bits (77), Expect = 0.038 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Frame = +1 Query: 85 VGFIGYPNVGKSSVINTL-RSKKVCKVAPIAGETKVWQYITLMKRIFLIDCPG 240 + F G NVGKSS++N L R V + + G T+ + L ++ L+D PG Sbjct: 291 IAFAGRSNVGKSSLLNALTRQWGVVRTSDKPGLTQTINFFGLGPKVRLVDLPG 343 >At5g58370.1 68418.m07308 expressed protein Length = 446 Score = 35.1 bits (77), Expect = 0.038 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Frame = +1 Query: 85 VGFIGYPNVGKSSVINTL-RSKKVCKVAPIAGETKVWQYITLMKRIFLIDCPG 240 + F G NVGKSS++N L R V + + G T+ + L ++ L+D PG Sbjct: 291 IAFAGRSNVGKSSLLNALTRQWGVVRTSDKPGLTQTINFFGLGPKVRLVDLPG 343 >At5g39960.1 68418.m04846 GTP-binding family protein contains Pfam domain, PF01926: GTPase of unknown function Length = 616 Score = 34.3 bits (75), Expect = 0.067 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +1 Query: 70 KKQISVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGETK---VWQYITLMKRIFLIDCPG 240 K + + +G PNVGKS+++N L ++ V P AG T+ Q+ + ++L+D G Sbjct: 310 KLPLQLAIVGKPNVGKSTLLNALLEEERVLVGPEAGLTRDAVRVQFEFQGRTVYLVDTAG 369 >At1g30960.1 68414.m03791 GTP-binding protein (ERG) identical to GTP-binding protein ERG SP:O82653 from [Arabidopsis thaliana] Length = 437 Score = 34.3 bits (75), Expect = 0.067 Identities = 15/29 (51%), Positives = 20/29 (68%) Frame = +1 Query: 67 DKKQISVGFIGYPNVGKSSVINTLRSKKV 153 D+K ++VG IG PN GKSS+ N + KV Sbjct: 150 DQKSLNVGIIGPPNAGKSSLTNFMVGTKV 178 >At2g41670.1 68415.m05148 GTP-binding family protein contains Pfam domain, PF01926: GTPase of unknown function Length = 386 Score = 32.7 bits (71), Expect = 0.21 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 13/68 (19%) Frame = +1 Query: 94 IGYPNVGKSSVINTLRS-----------KKVCKVAPIAGETKVWQYITLMKR--IFLIDC 234 +G PNVGKS++IN++ K V P+ G T+ + R I+++D Sbjct: 142 VGVPNVGKSALINSIHQIAAARFPVQERLKRATVGPLPGVTQDIAGFKIAHRPSIYVLDS 201 Query: 235 PGVVYPSL 258 PGV+ PS+ Sbjct: 202 PGVLVPSI 209 >At1g78010.1 68414.m09091 tRNA modification GTPase, putative similar to tRNA modification GTPase trmE [strain PCC 7120, Anabaena sp.] SWISS-PROT:Q8YN91 Length = 560 Score = 32.7 bits (71), Expect = 0.21 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = +1 Query: 79 ISVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGETK 186 + + +G PNVGKSS++N + V +AG T+ Sbjct: 318 LQIAIVGRPNVGKSSLLNAWSKSERAIVTEVAGTTR 353 >At1g50920.1 68414.m05725 GTP-binding protein-related similar to GTP-binding protein SP:Q99ME9 from [Mus musculus] Length = 671 Score = 32.3 bits (70), Expect = 0.27 Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 3/64 (4%) Frame = +1 Query: 64 IDKKQISVGFIGYPNVGKSSVINTLRSKKVCKVAPIAGETK---VWQYITLMKRIFLIDC 234 ID +V GYPNVGKSS +N + V V P A TK V R +ID Sbjct: 164 IDPNTRTVLICGYPNVGKSSFMNKVTRADV-DVQPYAFTTKSLFVGHTDYKYLRYQVIDT 222 Query: 235 PGVV 246 PG++ Sbjct: 223 PGIL 226 >At1g33530.1 68414.m04149 F-box family protein contains F-box domain Pfam:PF00646; contains TIGRFAM TIGR01640: F-box protein interaction domain Length = 441 Score = 31.9 bits (69), Expect = 0.36 Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 1/50 (2%) Frame = +3 Query: 306 VQNPDDYIEEVIKRVRKEYLVKTYKVD-GWETATEFLEKLAARTGKLLKK 452 V+ PD +EE+++R+ +YLV+ + GW++ E + LA + +LL+K Sbjct: 95 VELPDVLVEEILQRLPVKYLVRLKSISKGWKSLIE-SDHLAEKHLRLLEK 143 >At1g30580.1 68414.m03741 expressed protein Length = 394 Score = 31.5 bits (68), Expect = 0.47 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = +1 Query: 79 ISVGFIGYPNVGKSSVINTL 138 + +G +G PNVGKS++ NTL Sbjct: 25 LKIGIVGLPNVGKSTLFNTL 44 >At3g01850.2 68416.m00129 ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putative strong similarity to D-ribulose-5-phosphate 3-epimerase [Oryza sativa] GI:6007803; contains Pfam profile PF00834: Ribulose-phosphate 3 epimerase family; contains non-consensus splice sites at exon 1 and exon2 Length = 225 Score = 30.7 bits (66), Expect = 0.83 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Frame = +3 Query: 303 LVQNPDDYIEEVIKRVRKEYLVKTYKV-DGWETATEFLEKLAARTGKLLKKGEPDVNQVA 479 +V NP DY+ ++ K + D W+ E ++ R G LK G P V QV Sbjct: 69 MVTNPMDYVAQMAKAGASGFTFHVEVAQDNWQQLVEKIKSTGMRPGVALKPGTP-VEQVY 127 Query: 480 RMV 488 +V Sbjct: 128 PLV 130 >At3g01850.1 68416.m00128 ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putative strong similarity to D-ribulose-5-phosphate 3-epimerase [Oryza sativa] GI:6007803; contains Pfam profile PF00834: Ribulose-phosphate 3 epimerase family; contains non-consensus splice sites at exon 1 and exon2 Length = 225 Score = 30.7 bits (66), Expect = 0.83 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Frame = +3 Query: 303 LVQNPDDYIEEVIKRVRKEYLVKTYKV-DGWETATEFLEKLAARTGKLLKKGEPDVNQVA 479 +V NP DY+ ++ K + D W+ E ++ R G LK G P V QV Sbjct: 69 MVTNPMDYVAQMAKAGASGFTFHVEVAQDNWQQLVEKIKSTGMRPGVALKPGTP-VEQVY 127 Query: 480 RMV 488 +V Sbjct: 128 PLV 130 >At4g39520.1 68417.m05588 GTP-binding protein, putative similar to SP|Q9Y295 Developmentally regulated GTP-binding protein 1 (DRG 1) {Homo sapiens}; contains Pfam profiles PF02824: TGS domain, PF01018: GTP1/OBG family Length = 369 Score = 29.5 bits (63), Expect = 1.9 Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 3/57 (5%) Frame = +1 Query: 85 VGFIGYPNVGKSSVINTLRSKKVCKVA--PIAGETKVWQYITLM-KRIFLIDCPGVV 246 VG +G+P+VGKS+++N L + +VA T + IT +I L+D PG++ Sbjct: 68 VGLVGFPSVGKSTLLNKL-TGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPGII 123 >At3g10920.1 68416.m01317 superoxide dismutase [Mn], mitochondrial (SODA) / manganese superoxide dismutase (MSD1) identical to manganese superoxide dismutase [Arabidopsis thaliana] gi|3273751|gb|AAC24832 Length = 231 Score = 29.5 bits (63), Expect = 1.9 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = +3 Query: 342 KRVRKEYLVKTYKVDGWETATEFLEK 419 K VR EYL +KV W+ A+E EK Sbjct: 203 KNVRPEYLKNVWKVINWKYASEVYEK 228 >At1g80770.1 68414.m09476 expressed protein Length = 451 Score = 29.5 bits (63), Expect = 1.9 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%) Frame = +1 Query: 64 IDKKQISVGFIGYPNVGKSSVINTLRSKK--VCKVAPIAGETKVWQYITL-MKRIFLIDC 234 +D + ++ +G PNVGKSS++ L + K +C P + +I L +R + D Sbjct: 249 VDLEMPTLCLVGAPNVGKSSLVRILSTGKPEICNY-PFTTRGILMGHIVLNYQRFQVTDT 307 Query: 235 PGVV 246 PG++ Sbjct: 308 PGLL 311 >At1g07630.1 68414.m00818 protein phosphatase 2C family protein / PP2C family protein similar to protein phosphatase-2c (GI:3608412) [Mesembryanthemum crystallinum]; contains Pfam PF00481 : Protein phosphatase 2C domain Length = 662 Score = 29.5 bits (63), Expect = 1.9 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Frame = +3 Query: 159 SSPNCW*NKSLA-VYHLNEENILD*LSGCCLSIAETDTEKVLKGVVRVELVQNPDDYIEE 335 S P+ W K + +NEE +++ L GC E D ++ + +L + IEE Sbjct: 444 SEPDYWLAKIRQDLERINEETMMNDLEGC-----EGDQSSLVPNLSAFQLTVDHSTNIEE 498 Query: 336 VIKRVRKEY 362 ++R+R E+ Sbjct: 499 EVERIRNEH 507 >At5g55300.1 68418.m06891 DNA topoisomerase I identical to Swiss-Prot:P30181 DNA topoisomerase I [Arabidopsis thaliana] Length = 916 Score = 29.1 bits (62), Expect = 2.5 Identities = 18/64 (28%), Positives = 27/64 (42%) Frame = +3 Query: 273 KVLKGVVRVELVQNPDDYIEEVIKRVRKEYLVKTYKVDGWETATEFLEKLAARTGKLLKK 452 K L + E +N D+I+ + K + K K+ AT ++KLA R G Sbjct: 588 KGLSDKEKYEKARNLTDHIDNIRTTYTKNFTAKDVKMRQIAVATYLIDKLALRAGNEKDD 647 Query: 453 GEPD 464 E D Sbjct: 648 DEAD 651 >At5g66470.1 68418.m08382 expressed protein Length = 427 Score = 27.9 bits (59), Expect = 5.8 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Frame = +1 Query: 85 VGFIGYPNVGKSSVINTLRSKKVCKVA--PIAGETKVWQYITLMK-RIFLIDCPGVV 246 V +G PNVGKS++ N + +K+ V P ++ + + ++ L D PGV+ Sbjct: 132 VAVVGMPNVGKSTLSNQMIGQKISIVTDKPQTTRHRILGICSSPEYQMILYDTPGVI 188 >At4g28740.1 68417.m04110 expressed protein Length = 347 Score = 27.9 bits (59), Expect = 5.8 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = +3 Query: 279 LKGVVRVELVQNPDDYIEEVIKRVRKEY 362 L+GV R+ + P ++IEE KR KEY Sbjct: 204 LRGVARLVICAGPAEFIEEAFKR-SKEY 230 >At3g20740.1 68416.m02624 fertilization-independent endosperm protein (FIE) contains 6 WD-40 repeats (PF00400); identical to fertilization-independent endosperm protein (GI:4567095) [Arabidopsis thaliana] Length = 369 Score = 27.9 bits (59), Expect = 5.8 Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 3/56 (5%) Frame = -3 Query: 559 LREWYFKSLWSYIERQFPLCQSLRTILATWLTSGSPF---FNNFPVLAASFSKNSV 401 ++ W K W+Y+E+ F TW S F F FPV AS N V Sbjct: 199 IKIWSMKEFWTYVEKSF-----------TWTDDPSKFPTKFVQFPVFTASIHTNYV 243 >At1g07620.1 68414.m00817 GTP1/OBG family protein similar to SP|P20964 Spo0B-associated GTP-binding protein {Bacillus subtilis}; contains Pfam profile PF01018: GTP1/OBG family Length = 1016 Score = 27.9 bits (59), Expect = 5.8 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = +1 Query: 37 LLRQFGKLHIDKKQIS-VGFIGYPNVGKSSVINTLRSKK 150 LL L ++ K I+ VG +G PN GKS+++ L K Sbjct: 812 LLGSEAVLILELKSIADVGLVGMPNAGKSTLLGALSRAK 850 >At5g44870.1 68418.m05501 disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein. Length = 1170 Score = 27.5 bits (58), Expect = 7.7 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Frame = +1 Query: 4 HEPFGKGSLINLLRQFGKLHIDKKQI-SVGFIGYPNVGKSSVINTLRSK 147 H P G L KL D + +VG +G P +GK+++ TL K Sbjct: 251 HPPPNYGIEPRLKEMEEKLDFDSLETKTVGIVGMPGIGKTTLAETLYRK 299 >At3g51570.1 68416.m05648 disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein. Length = 1226 Score = 27.5 bits (58), Expect = 7.7 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Frame = +1 Query: 1 RHEPFGKGSLINLLRQFGKLHIDKKQISV-GFIGYPNVGKSSVINTLRSKKVCK 159 +HE +G + L++ KL +D ++ + G +G P +GK+++ + CK Sbjct: 206 KHEIYGLKQRLEELKE--KLDLDCEETRILGVVGMPGIGKTTLAREIYETLRCK 257 >At3g24430.1 68416.m03066 expressed protein contains Pfam profile PF01883: Domain of unknown function Length = 532 Score = 27.5 bits (58), Expect = 7.7 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = +1 Query: 1 RHEPFGKGSLINLLRQFGKLHI 66 R+ PFGKGS +++QFG H+ Sbjct: 355 RYYPFGKGSGSEVVKQFGIPHL 376 >At1g67460.1 68414.m07681 hypothetical protein contains Pfam domain PF03193: Protein of unknown function, DUF258 Length = 434 Score = 27.5 bits (58), Expect = 7.7 Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 8/77 (10%) Frame = +1 Query: 70 KKQISVGFIGYPNVGKSSVINTLRS---KKVCKVAPIAGETK-VWQYITLMKRI---FLI 228 + Q SV +G VGKSS+IN LRS + V +V+ G K + +TL+ +L Sbjct: 247 RNQTSV-IVGPSGVGKSSLINILRSSYDQSVGEVSHRNGRGKHTTRNVTLLPLCGGGYLA 305 Query: 229 DCPGV-VYPSLKQTQRK 276 D PG + LK T++K Sbjct: 306 DTPGFNKHKLLKVTKQK 322 >At1g48110.1 68414.m05369 expressed protein contains Pfam profile PF04146: YT521-B-like family Length = 639 Score = 27.5 bits (58), Expect = 7.7 Identities = 12/39 (30%), Positives = 22/39 (56%) Frame = +2 Query: 509 KLPFYVAPEGFEVPLSKQTQDEKTVEVANEEEKITTETK 625 K P ++ + E+P + +E TV+ NEE+ +T+ K Sbjct: 521 KKPSVISAKTEELPSKSEGNEETTVKEGNEEDTSSTQKK 559 >At1g09180.1 68414.m01025 GTP-binding protein, putative strong similarity to SP:Q01474 GTP-binding protein SAR1B and SP:O04834 GTP-binding protein SAR1A [Arabidopsis thaliana] Length = 193 Score = 27.5 bits (58), Expect = 7.7 Identities = 10/37 (27%), Positives = 24/37 (64%) Frame = +1 Query: 58 LHIDKKQISVGFIGYPNVGKSSVINTLRSKKVCKVAP 168 L + KK+ + F+G N GK+++++ L+ +++ + P Sbjct: 14 LGLCKKEAKILFLGLDNAGKTTLLHMLKDERLVQHQP 50 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,052,648 Number of Sequences: 28952 Number of extensions: 232653 Number of successful extensions: 748 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 732 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 745 length of database: 12,070,560 effective HSP length: 78 effective length of database: 9,812,304 effective search space used: 1275599520 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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