Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060690.seq
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   2.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   3.7  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   3.7  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    21   8.6  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    21   8.6  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 273 RALNKMWNYSDFCLMCI 323
           RA N+++ +  FC +C+
Sbjct: 11  RASNQLFRFGQFCAICV 27


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 533 YNTQS*YWNVVVVLWRTIT 589
           Y T S  W+  V+LW  +T
Sbjct: 671 YTTYSDVWSFGVLLWEIVT 689


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 163 ILDYLNCRFTNDFSFNNI 216
           IL +L+CRF    S+N +
Sbjct: 79  ILTFLSCRFHQGASYNTL 96


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 356 PRCLTHLRTRCLQTEDTDGSS 418
           PR L  LRT+C + + T  S+
Sbjct: 85  PRALRRLRTQCERAKRTLSSA 105


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 356 PRCLTHLRTRCLQTEDTDGSS 418
           PR L  LRT+C + + T  S+
Sbjct: 85  PRALRRLRTQCERAKRTLSSA 105


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,542
Number of Sequences: 336
Number of extensions: 3412
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)