Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060690.seq
         (635 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   6.1  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   8.1  
AY825724-1|AAV70287.1|  159|Anopheles gambiae subtilase serine p...    23   8.1  
AY825711-1|AAV70274.1|  159|Anopheles gambiae subtilase serine p...    23   8.1  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 551 YWNVVVVLWRTITTTVWIPE 610
           YW+ ++ L  TIT  +W P+
Sbjct: 141 YWSSMLNLDATITCGIWTPD 160


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 440 LFKAYANVMTHPYPPSGGTLYAGALDILV 354
           LF  + N + +  PP G  LYA  + I +
Sbjct: 682 LFSLFINDVCNVLPPDGHLLYADDIKIFL 710


>AY825724-1|AAV70287.1|  159|Anopheles gambiae subtilase serine
           protease protein.
          Length = 159

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -3

Query: 459 EGKNDYIIQSIRECDDPSVSSVWRHLVRRCVRHLGTFITL 340
           EG  DY    I + D  +  +V++ L++    HL   + L
Sbjct: 94  EGLRDYQTAQISKLDAENAENVYQALLKDNPNHLAAHLAL 133


>AY825711-1|AAV70274.1|  159|Anopheles gambiae subtilase serine
           protease protein.
          Length = 159

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -3

Query: 459 EGKNDYIIQSIRECDDPSVSSVWRHLVRRCVRHLGTFITL 340
           EG  DY    I + D  +  +V++ L++    HL   + L
Sbjct: 94  EGLRDYQTAQISKLDAENAENVYQALLKDNPNHLAAHLAL 133


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,888
Number of Sequences: 2352
Number of extensions: 13598
Number of successful extensions: 68
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)