Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060690.seq
         (635 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    24   1.1  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    24   1.1  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    24   1.1  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   7.6  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 540 LNHSIGMLLSFFGGPLLRRFGYRKVAAVGG 629
           + +S  +L   +GGPLLR F    +  V G
Sbjct: 214 ITNSTPLLKKLYGGPLLRIFTKHMLDVVSG 243


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 540 LNHSIGMLLSFFGGPLLRRFGYRKVAAVGG 629
           + +S  +L   +GGPLLR F    +  V G
Sbjct: 229 ITNSTPLLKKLYGGPLLRIFTKHMLDVVSG 258


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 354 TFITLQITSIKYTLNKNHCNST 289
           T  T  +TS K T+ +NH NST
Sbjct: 327 TTTTSPMTSTKSTIVRNHLNST 348


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 409 WVITFAYALNNVVVLPLISSFGLVFQEAFDET 504
           ++I FAY +  +VV  + +       EAF+E+
Sbjct: 816 YMIAFAYPIMLIVVCTVYAVLTRKIPEAFNES 847


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,126
Number of Sequences: 438
Number of extensions: 4336
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)