Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060688.seq
         (637 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   6.5  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   6.5  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   6.5  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   6.5  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   8.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.6  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 431 HIQKQQVMNSQHSH 472
           HIQ+QQ+    H+H
Sbjct: 54  HIQQQQLQYGYHNH 67


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 431 HIQKQQVMNSQHSH 472
           HIQ+QQ+    H+H
Sbjct: 54  HIQQQQLQYGYHNH 67


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 431 HIQKQQVMNSQHSH 472
           HIQ+QQ+    H+H
Sbjct: 54  HIQQQQLQYGYHNH 67


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 431 HIQKQQVMNSQHSH 472
           HIQ+QQ+    H+H
Sbjct: 54  HIQQQQLQYGYHNH 67


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -3

Query: 260 PKDIQSLYFSVFSRFLSQFLIFSL 189
           P DI S YF    +F   +++F++
Sbjct: 36  PTDINSFYFYKTEQFTVLWVLFTM 59


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 445  ASYEFTTLTCIPGVI 489
            A YEF TLT   G I
Sbjct: 1575 AEYEFATLTVTGGTI 1589


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
 Frame = -3

Query: 395  TEGKPIKATRASPDFSTSKPSPL---SPP 318
            +EG P+K T   P   +S P      SPP
Sbjct: 1101 SEGVPLKGTAVPPPSGSSGPGSTGSKSPP 1129


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,535
Number of Sequences: 336
Number of extensions: 2652
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)