Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060687.seq
(624 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 53 3e-08
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 49 6e-07
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 44 1e-05
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 41 2e-04
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 38 0.001
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 38 0.001
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 36 0.005
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 35 0.011
SPAC12B10.09 |||S-adenosylmethionine transporter |Schizosaccharo... 31 0.18
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 30 0.24
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 29 0.72
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 27 1.7
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 27 2.2
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 27 2.9
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 27 2.9
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 26 3.8
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 25 6.7
SPCC1259.07 |||transcriptional regulatory protein Rxt3 |Schizosa... 25 8.9
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 25 8.9
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 53.2 bits (122), Expect = 3e-08
Identities = 28/74 (37%), Positives = 38/74 (51%)
Frame = +3
Query: 270 FPIDTTKTRLQIQGQKIDPRHVELRYTGMVDCIIKTSKQEGVKALYCGIWPAVLRQATYG 449
FP++ +TRLQ QG P Y G +DC KT+K EG + LY G+ P +L+ A
Sbjct: 354 FPLNVIRTRLQTQGTSAHPA----TYDGFIDCFYKTTKNEGFRGLYKGLSPNLLKVAPSV 409
Query: 450 TIKFGTYYTLKNAL 491
I + Y K L
Sbjct: 410 AISYLVYENCKKWL 423
Score = 28.7 bits (61), Expect = 0.72
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +3
Query: 267 TFPIDTTKTRL-QIQGQKIDPRHVELRYTGMVDCIIKTSKQEGVKALYCGIWPAVLRQAT 443
T P+D K L G K P++ + ++ + G+++ + G VL+
Sbjct: 145 TAPLDRLKVMLISDTGSKPSPKYP---FATLLHTTKVLWNRNGIRSFFVGNGINVLKVMP 201
Query: 444 YGTIKFGTYYTLKNAL 491
+IKFGTY +K L
Sbjct: 202 ESSIKFGTYEAMKRVL 217
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 48.8 bits (111), Expect = 6e-07
Identities = 32/94 (34%), Positives = 46/94 (48%)
Frame = +3
Query: 270 FPIDTTKTRLQIQGQKIDPRHVELRYTGMVDCIIKTSKQEGVKALYCGIWPAVLRQATYG 449
+P+D KTR+Q+ K D Y G DC+ K K EG LY GI P +L +A
Sbjct: 27 YPLDVVKTRMQLSVGKSD-------YNGTFDCLKKIVKNEGPHRLYRGILPPILMEAPKR 79
Query: 450 TIKFGTYYTLKNALAKRRAEVERRSTSLRTLSVL 551
+KF + + +K +V +R S LS+L
Sbjct: 80 ALKFAS----NDTYSKLWRKVFKRKDSSPALSIL 109
Score = 39.9 bits (89), Expect = 3e-04
Identities = 25/84 (29%), Positives = 37/84 (44%)
Frame = +3
Query: 261 FGTFPIDTTKTRLQIQGQKIDPRHVELRYTGMVDCIIKTSKQEGVKALYCGIWPAVLRQA 440
F P + K RLQ D ++ +Y G VDC K KQE + ALY G + R
Sbjct: 120 FVVVPFELMKIRLQ------DVKNAS-KYNGTVDCFTKIVKQERILALYNGFEATMWRHV 172
Query: 441 TYGTIKFGTYYTLKNALAKRRAEV 512
+ FG ++N+L + +
Sbjct: 173 VWNAGYFGVIQKIRNSLTPASSRI 196
Score = 30.7 bits (66), Expect = 0.18
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +3
Query: 261 FGTF---PIDTTKTRLQIQGQKIDPRHVELRYTGMVDCIIKTSKQEGVKALYCGIWPAVL 431
FGTF P D K+R+Q + +Y ++ +++EG ALY G P VL
Sbjct: 212 FGTFLSTPFDVIKSRIQTVPRIAGQVP---KYNWAYPALVTVAREEGFTALYKGFVPKVL 268
Query: 432 RQATYGTI 455
R G I
Sbjct: 269 RLGPGGGI 276
Score = 25.4 bits (53), Expect = 6.7
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +2
Query: 539 TFCAAFAGGLSSAIA-NPTDVLKVRMQM 619
TF A G+S + P DV+K RMQ+
Sbjct: 11 TFAAGAVAGISEVLTLYPLDVVKTRMQL 38
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 44.4 bits (100), Expect = 1e-05
Identities = 24/71 (33%), Positives = 38/71 (53%)
Frame = +3
Query: 270 FPIDTTKTRLQIQGQKIDPRHVELRYTGMVDCIIKTSKQEGVKALYCGIWPAVLRQATYG 449
+ +D +TRL K + E ++ G+VD KT + +G++ LY G P+V+ Y
Sbjct: 151 YSLDYARTRLA-NDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGFGPSVVGIVVYR 209
Query: 450 TIKFGTYYTLK 482
+ FG Y TLK
Sbjct: 210 GLYFGMYDTLK 220
Score = 36.3 bits (80), Expect = 0.004
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +3
Query: 240 ISVHSAEFGTFPIDTTKTRLQIQGQKIDPRHVELRYTGMVDCIIKTSKQEGVKALYCGIW 419
+S ++ PI+ K +Q Q + I + RY G+ +C +T+ +EGV +L+ G
Sbjct: 36 VSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRGNT 95
Query: 420 PAVLR 434
VLR
Sbjct: 96 ANVLR 100
Score = 27.5 bits (58), Expect = 1.7
Identities = 15/73 (20%), Positives = 34/73 (46%)
Frame = +3
Query: 216 LATVYLRWISVHSAEFGTFPIDTTKTRLQIQGQKIDPRHVELRYTGMVDCIIKTSKQEGV 395
LA+ L W + ++P+DT + R+ + + ++Y+ +C + +EG
Sbjct: 233 LASFLLGWAVTTGSGVASYPLDTIRRRMMMTSGE------AVKYSSSFECGRQILAKEGA 286
Query: 396 KALYCGIWPAVLR 434
++ + G +LR
Sbjct: 287 RSFFKGAGANILR 299
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 40.7 bits (91), Expect = 2e-04
Identities = 28/79 (35%), Positives = 41/79 (51%)
Frame = +3
Query: 267 TFPIDTTKTRLQIQGQKIDPRHVELRYTGMVDCIIKTSKQEGVKALYCGIWPAVLRQATY 446
T PI KTRLQ+ + +Y +DCIIKT + EG + LY G+ A L
Sbjct: 180 TNPIWLVKTRLQLDKKSGQAA----QYRSSIDCIIKTIRLEGFRGLYKGL-SASLLGVGE 234
Query: 447 GTIKFGTYYTLKNALAKRR 503
T+++ Y K+A+A R+
Sbjct: 235 STLQWVLYEKFKHAVAIRQ 253
Score = 35.1 bits (77), Expect = 0.008
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 270 FPIDTTKTRLQIQGQKIDPRHVELRYTGMVDCIIKTSKQEGVKALYCGIWPAVLRQATYG 449
+P + +TRL+ Q I+ +YTG++ C ++G+ LY G+ +LR
Sbjct: 291 YPHEVVRTRLR-QSPSINGTP---KYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNA 346
Query: 450 TIKFGTY 470
I FG+Y
Sbjct: 347 CILFGSY 353
Score = 27.1 bits (57), Expect = 2.2
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Frame = +3
Query: 267 TFPIDTTKTRLQ--------IQGQKIDPRHVELRYTGMVD-CII-KTSK-QEGVKALYCG 413
T P+D KTRLQ ++ + Y +D CII K K EG +AL+ G
Sbjct: 66 TAPLDVVKTRLQSDFYKDRFLKQTAKSKSPLTAAYRHFMDTCIILKNVKVHEGTRALFRG 125
Query: 414 IWPAVLRQATYGTIKFGTYYTLKNALA 494
+ P ++ +I F +Y K LA
Sbjct: 126 LGPNLIGTIPARSINFFSYGNGKRILA 152
Score = 27.1 bits (57), Expect = 2.2
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 518 KEHLPTNTFCAAFAGGLSSAIANPTDVLKVRMQM 619
+E+ + AA AG ++SA NP ++K R+Q+
Sbjct: 159 QENSQIHLMAAAIAGVITSAATNPIWLVKTRLQL 192
Score = 25.0 bits (52), Expect = 8.9
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +2
Query: 530 PTNTFCAAFAGGLSSAIAN-PTDVLKVRMQ 616
P + F A G+ AIA P DV+K R+Q
Sbjct: 48 PLSHFIAGGVAGMLGAIATAPLDVVKTRLQ 77
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 37.9 bits (84), Expect = 0.001
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +3
Query: 273 PIDTTKTRLQIQGQKIDPR-HVELRYTGMVDCIIKTSKQEGVKALYCGIWPAVLRQATYG 449
P + KTRLQ+QG+ +P Y + + +KQEG+K + G +LR +
Sbjct: 130 PSEVLKTRLQLQGRYNNPHFQSNYNYPSFRGAVKQIAKQEGMKTFFYGYRATILRDIPFS 189
Query: 450 TIKFGTYYTLKNALAK 497
+ Y L+ K
Sbjct: 190 GFQLLFYEKLRQVAQK 205
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 37.9 bits (84), Expect = 0.001
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +3
Query: 267 TFPIDTTKTRLQIQGQ--KIDPRHVELRYTGMVDCIIKTSKQEGVKALYCGIWPAVLRQA 440
T P + KTR Q+QGQ K+DP + G +I ++ EG++ L G+ A + Q
Sbjct: 41 TNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLI--ARHEGIRGLQRGLGTAYVYQI 98
Query: 441 TYGTIKFGTYYTLKNAL 491
+ G Y ++ L
Sbjct: 99 CLNGCRLGFYEPIRRTL 115
Score = 32.3 bits (70), Expect = 0.059
Identities = 22/79 (27%), Positives = 36/79 (45%)
Frame = +3
Query: 255 AEFGTFPIDTTKTRLQIQGQKIDPRHVELRYTGMVDCIIKTSKQEGVKALYCGIWPAVLR 434
A FG+ P KTR+Q K P + Y + + + K+ GVK L+ G A+LR
Sbjct: 143 ALFGS-PFFLVKTRMQSYSPKF-PVGQQYGYKHIFNAFSRIIKENGVKGLFVGADAAILR 200
Query: 435 QATYGTIKFGTYYTLKNAL 491
+ +++ Y K +
Sbjct: 201 TVSGSSVQLPIYNWAKRMI 219
Score = 31.9 bits (69), Expect = 0.077
Identities = 27/71 (38%), Positives = 34/71 (47%)
Frame = +3
Query: 279 DTTKTRLQIQGQKIDPRHVELRYTGMVDCIIKTSKQEGVKALYCGIWPAVLRQATYGTIK 458
DT TR+ Q K EL Y +DCI+KT + EG ALY G + R A + TI
Sbjct: 251 DTVMTRMYNQKNK------EL-YKNPIDCILKTIRSEGFFALYKGFGAHLARIAPH-TIF 302
Query: 459 FGTYYTLKNAL 491
T+ N L
Sbjct: 303 CLTFVEQTNKL 313
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 35.9 bits (79), Expect = 0.005
Identities = 21/78 (26%), Positives = 34/78 (43%)
Frame = +3
Query: 273 PIDTTKTRLQIQGQKIDPRHVELRYTGMVDCIIKTSKQEGVKALYCGIWPAVLRQATYGT 452
P++ K Q+Q K YT + ++K +EG+ + G LR YG
Sbjct: 40 PLERMKIIFQVQNNK--------EYTSLTSTLVKIWNREGLIGFFRGNGTNCLRAFPYGA 91
Query: 453 IKFGTYYTLKNALAKRRA 506
++F T+ LK K R+
Sbjct: 92 VQFATFNMLKQRALKNRS 109
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 34.7 bits (76), Expect = 0.011
Identities = 24/75 (32%), Positives = 34/75 (45%)
Frame = +3
Query: 273 PIDTTKTRLQIQGQKIDPRHVELRYTGMVDCIIKTSKQEGVKALYCGIWPAVLRQATYGT 452
P D K RLQ Q +V Y +DC+ K SK EG+ A Y G +L +
Sbjct: 37 PFDCVKVRLQSQS------NVSPIYNNALDCVKKISKNEGLAAFYKGTVLPLLGIGFCVS 90
Query: 453 IKFGTYYTLKNALAK 497
I+F T+ K ++
Sbjct: 91 IQFTTFEYCKRFFSR 105
>SPAC12B10.09 |||S-adenosylmethionine transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 345
Score = 30.7 bits (66), Expect = 0.18
Identities = 25/73 (34%), Positives = 31/73 (42%)
Frame = +3
Query: 267 TFPIDTTKTRLQIQGQKIDPRHVELRYTGMVDCIIKTSKQEGVKALYCGIWPAVLRQATY 446
T P D KTR+ Q+ L Y + I+ EG ALY GI P VL +
Sbjct: 276 TTPFDVVKTRIMTSQQR-------LSYVFTIKSIVA---HEGFLALYKGIVPRVLWLSGG 325
Query: 447 GTIKFGTYYTLKN 485
G I G Y + N
Sbjct: 326 GAIFLGCYDVILN 338
Score = 27.9 bits (59), Expect = 1.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 252 SAEFGTFPIDTTKTRLQIQG 311
+ + FPIDT KTRLQ +G
Sbjct: 95 AVDLSLFPIDTLKTRLQAKG 114
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 30.3 bits (65), Expect = 0.24
Identities = 20/68 (29%), Positives = 27/68 (39%)
Frame = +3
Query: 267 TFPIDTTKTRLQIQGQKIDPRHVELRYTGMVDCIIKTSKQEGVKALYCGIWPAVLRQATY 446
T PIDT K+R+Q Y + C K Q+G+ + G P + R
Sbjct: 221 TQPIDTVKSRMQ-------SLSASKEYKNSIHCAYKILTQDGLLRFWSGATPRLARLILS 273
Query: 447 GTIKFGTY 470
G I F Y
Sbjct: 274 GGIVFTVY 281
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 28.7 bits (61), Expect = 0.72
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +3
Query: 270 FPIDTTKTRLQIQGQKIDPRHVELRYTGMVDCIIKTSKQEGVKALYCGIWPAVLRQATYG 449
+P+D KTR+Q+ R V +V+ +IK S EGV +L+ GI ++
Sbjct: 38 YPVDAIKTRMQMLNGV--SRSVS---GNIVNSVIKISSTEGVYSLWRGISSVIMGAGPSH 92
Query: 450 TIKFGTYYTLKNAL 491
I F K+ +
Sbjct: 93 AIYFSVLEFFKSKI 106
Score = 27.1 bits (57), Expect = 2.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 551 AFAGGLSSAIANPTDVLKVRMQM 619
AF+G L ++ P D +K RMQM
Sbjct: 27 AFSGILEHSVMYPVDAIKTRMQM 49
Score = 25.0 bits (52), Expect = 8.9
Identities = 17/73 (23%), Positives = 27/73 (36%)
Frame = +3
Query: 273 PIDTTKTRLQIQGQKIDPRHVELRYTGMVDCIIKTSKQEGVKALYCGIWPAVLRQATYGT 452
P D K R+Q+ +K Y + C + EG+ A Y + +
Sbjct: 133 PFDVIKQRMQLPSRK---------YKSALHCATTVFRNEGLGAFYISYPTCIAMSIPFTA 183
Query: 453 IKFGTYYTLKNAL 491
I+ TY T + L
Sbjct: 184 IQVATYDTCMSFL 196
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 27.5 bits (58), Expect = 1.7
Identities = 25/82 (30%), Positives = 34/82 (41%)
Frame = +3
Query: 240 ISVHSAEFGTFPIDTTKTRLQIQGQKIDPRHVELRYTGMVDCIIKTSKQEGVKALYCGIW 419
IS F P D K R+QI + P E T ++EGV+AL+ G
Sbjct: 25 ISSVICRFMIAPFDVIKIRMQITQSSLRPVFKE------------TVQKEGVRALWRGNV 72
Query: 420 PAVLRQATYGTIKFGTYYTLKN 485
A L YG +F + LK+
Sbjct: 73 VAELLYLVYGAAEFVAFSKLKH 94
Score = 26.2 bits (55), Expect = 3.8
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 345 YTGMVDCIIKTSKQEGVKALYCGIWPAVLRQA 440
Y DC + + G+K LY G+ ++L+ A
Sbjct: 227 YKSFKDCFLSIYRNSGIKGLYRGLSVSMLKVA 258
Score = 25.8 bits (54), Expect = 5.1
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 4/25 (16%)
Frame = +2
Query: 557 AGGLSSAIAN----PTDVLKVRMQM 619
AGG+SS I P DV+K+RMQ+
Sbjct: 22 AGGISSVICRFMIAPFDVIKIRMQI 46
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 27.1 bits (57), Expect = 2.2
Identities = 15/70 (21%), Positives = 30/70 (42%)
Frame = +3
Query: 273 PIDTTKTRLQIQGQKIDPRHVELRYTGMVDCIIKTSKQEGVKALYCGIWPAVLRQATYGT 452
PI+ +TR+Q G P H + D + Q+G+ L+ G+ + R +
Sbjct: 156 PIELFRTRVQAVGGHYPPGHAREIANEVFDGLKLMIHQKGILNLWSGVSVTLWRDVPFSA 215
Query: 453 IKFGTYYTLK 482
+ +Y ++
Sbjct: 216 FYWWSYERIR 225
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 26.6 bits (56), Expect = 2.9
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +3
Query: 345 YTGMVDCIIKTSKQEGVKALYCGIWPAVLRQATYGTIKFGTYYTLKN 485
Y G + +EG++ LY G P ++ + G K+G Y K+
Sbjct: 58 YPGNIAGFKTILSKEGLRGLYTGGMPTLIGYSLQGCGKYGFYELFKH 104
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 26.6 bits (56), Expect = 2.9
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 530 PTNTFCAAF-AGGLSSAIANPTDVLKVRMQ 616
P +TF AA + +S+ I P D +KVR Q
Sbjct: 17 PASTFSAALVSSAISNVIGYPLDSIKVRQQ 46
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 26.2 bits (55), Expect = 3.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 545 CAAFAGGLSSAIANPTDVLKVRMQMG 622
C AFAG ++ P +V + +MQ+G
Sbjct: 242 CGAFAGVCGQTVSYPFEVCRRKMQIG 267
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 25.4 bits (53), Expect = 6.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 381 KQEGVKALYCGIWPAVLRQATYGTIKFGTYYTLK 482
K EG++ Y G P++L + G ++F Y LK
Sbjct: 145 KNEGLRGCYAGFAPSLL-GVSQGALQFMAYEKLK 177
>SPCC1259.07 |||transcriptional regulatory protein Rxt3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 351
Score = 25.0 bits (52), Expect = 8.9
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 190 ISRVMGERNWRPFIYGGLASIVQNSAHSLSIQPKL 294
IS + E W+P ASI +NS H+L+++ +L
Sbjct: 307 ISLKIKEVTWKP----ACASIFENSIHTLTLEERL 337
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 25.0 bits (52), Expect = 8.9
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 500 TSGGGTKEHLPTNTFCAAF 556
TS T HLPTNT + F
Sbjct: 3731 TSSSFTTSHLPTNTLASTF 3749
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,642,444
Number of Sequences: 5004
Number of extensions: 54085
Number of successful extensions: 168
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 164
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 275671126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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