Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060684.seq
         (604 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    24   1.3  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    24   1.3  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    24   1.3  
AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.            23   3.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   9.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   9.3  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   9.3  

>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = +2

Query: 245 VYKSEEISYQGQKFT-LSYNYMNCKSKPESTEESSDKSLLVEIQDGLWEATTRFMDDSDE 421
           + K   + +QG +    S++    K  P   +    K  L EI D + + TTRF D   +
Sbjct: 84  INKRAPMGFQGMRGKKASFDDEYYKRAPMGFQGMRGKKSLEEILDEIKKKTTRFQDSRSK 143

Query: 422 SPF 430
             +
Sbjct: 144 DVY 146


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = +2

Query: 245 VYKSEEISYQGQKFT-LSYNYMNCKSKPESTEESSDKSLLVEIQDGLWEATTRFMDDSDE 421
           + K   + +QG +    S++    K  P   +    K  L EI D + + TTRF D   +
Sbjct: 84  INKRAPMGFQGMRGKKASFDDEYYKRAPMGFQGMRGKKSLEEILDEIKKKTTRFQDSRSK 143

Query: 422 SPF 430
             +
Sbjct: 144 DVY 146


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = +2

Query: 245 VYKSEEISYQGQKFT-LSYNYMNCKSKPESTEESSDKSLLVEIQDGLWEATTRFMDDSDE 421
           + K   + +QG +    S++    K  P   +    K  L EI D + + TTRF D   +
Sbjct: 84  INKRAPMGFQGMRGKKASFDDEYYKRAPMGFQGMRGKKSLEEILDEIKKKTTRFQDSRSK 143

Query: 422 SPF 430
             +
Sbjct: 144 DVY 146


>AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.
          Length = 122

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 99  DEYDIYHQDFTTVSEWEV 152
           D  ++YH  F  V EW V
Sbjct: 59  DGIELYHHKFFQVHEWPV 76


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 420 SSLSSINLVVASQSPSWISTN 358
           S L  +NL+  S S  W ST+
Sbjct: 480 SFLERLNLIFMSSSLQWSSTH 500


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 420 SSLSSINLVVASQSPSWISTN 358
           S L  +NL+  S S  W ST+
Sbjct: 518 SFLERLNLIFMSSSLQWSSTH 538


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 206 CGFRQSPINQYLFYS 162
           CG   SP+   L+YS
Sbjct: 252 CGMALSPVTNNLYYS 266


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,466
Number of Sequences: 438
Number of extensions: 2542
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)