Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060683.seq
         (638 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025089-1|ABE73260.1|  764|Drosophila melanogaster IP13014p pro...    30   3.0  
BT010124-1|AAQ22593.1|  594|Drosophila melanogaster AT11375p pro...    29   4.0  
BT010069-1|AAQ22538.1|  314|Drosophila melanogaster LD13050p pro...    29   4.0  
AF253528-2|AAF71285.1|  314|Drosophila melanogaster proteolipid ...    29   4.0  
AF253528-1|AAF71284.1|  248|Drosophila melanogaster proteolipid ...    29   4.0  
AE014298-3068|AAF50869.1|  594|Drosophila melanogaster CG10998-P...    29   4.0  
AE014296-3552|AAN12170.1|  314|Drosophila melanogaster CG7540-PB...    29   4.0  
AE014296-3551|AAF51736.1|  314|Drosophila melanogaster CG7540-PA...    29   4.0  

>BT025089-1|ABE73260.1|  764|Drosophila melanogaster IP13014p
           protein.
          Length = 764

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 17/51 (33%), Positives = 31/51 (60%)
 Frame = +3

Query: 363 SHLNLKQH*IDKIKLITQLHSSRSRQKVRNQMRLSSRSVLHSDKFTFLIVN 515
           S L ++QH    + L +QLHS R  Q+ +  + L++ SV  S+K+++ + N
Sbjct: 698 SSLQIQQHVAFPVFLKSQLHSLRP-QQAQQVVSLTTNSVAESNKWSYPVGN 747


>BT010124-1|AAQ22593.1|  594|Drosophila melanogaster AT11375p
           protein.
          Length = 594

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
 Frame = +2

Query: 311 PPLCTFTDIKQLINHRYFTFKPEA----TLNRQNKTNHTTSLLAFPPKSPEPNE 460
           P LCTF ++ +++N  Y T +  +    T   + K ++ +S L+ P  SP  +E
Sbjct: 530 PQLCTFIELCRMLNKDYITLRKMSQLVTTKRLRTKISNRSSFLSSPNCSPNFSE 583


>BT010069-1|AAQ22538.1|  314|Drosophila melanogaster LD13050p
           protein.
          Length = 314

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = -2

Query: 412 VISFILSI*CCFRFKCEITVVY*LF-NICESAQRRENKTKPLDVTFRYPPKSPLKNLSI 239
           +++F+ S+  CF     +T +Y +F N+C S +  ++        F +PP + L+++ +
Sbjct: 181 LLNFVWSLILCFLVV--VTFIYTMFWNMCTSVEHSQSCIDLTQFHFMFPPNTKLEDMKV 237


>AF253528-2|AAF71285.1|  314|Drosophila melanogaster proteolipid
           protein M6-2 protein.
          Length = 314

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = -2

Query: 412 VISFILSI*CCFRFKCEITVVY*LF-NICESAQRRENKTKPLDVTFRYPPKSPLKNLSI 239
           +++F+ S+  CF     +T +Y +F N+C S +  ++        F +PP + L+++ +
Sbjct: 181 LLNFVWSLILCFLVV--VTFIYTMFWNMCTSVEHSQSCIDLTQFHFMFPPNTKLEDMKV 237


>AF253528-1|AAF71284.1|  248|Drosophila melanogaster proteolipid
           protein M6-1 protein.
          Length = 248

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = -2

Query: 412 VISFILSI*CCFRFKCEITVVY*LF-NICESAQRRENKTKPLDVTFRYPPKSPLKNLSI 239
           +++F+ S+  CF     +T +Y +F N+C S +  ++        F +PP + L+++ +
Sbjct: 115 LLNFVWSLILCFLVV--VTFIYTMFWNMCTSVEHSQSCIDLTQFHFMFPPNTKLEDMKV 171


>AE014298-3068|AAF50869.1|  594|Drosophila melanogaster CG10998-PA,
           isoform A protein.
          Length = 594

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
 Frame = +2

Query: 311 PPLCTFTDIKQLINHRYFTFKPEA----TLNRQNKTNHTTSLLAFPPKSPEPNE 460
           P LCTF ++ +++N  Y T +  +    T   + K ++ +S L+ P  SP  +E
Sbjct: 530 PQLCTFIELCRMLNKDYITLRKMSQLVTTKRLRTKISNRSSFLSSPNCSPNFSE 583


>AE014296-3552|AAN12170.1|  314|Drosophila melanogaster CG7540-PB,
           isoform B protein.
          Length = 314

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = -2

Query: 412 VISFILSI*CCFRFKCEITVVY*LF-NICESAQRRENKTKPLDVTFRYPPKSPLKNLSI 239
           +++F+ S+  CF     +T +Y +F N+C S +  ++        F +PP + L+++ +
Sbjct: 181 LLNFVWSLILCFLVV--VTFIYTMFWNMCTSVEHSQSCIDLTQFHFMFPPNTKLEDMKV 237


>AE014296-3551|AAF51736.1|  314|Drosophila melanogaster CG7540-PA,
           isoform A protein.
          Length = 314

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = -2

Query: 412 VISFILSI*CCFRFKCEITVVY*LF-NICESAQRRENKTKPLDVTFRYPPKSPLKNLSI 239
           +++F+ S+  CF     +T +Y +F N+C S +  ++        F +PP + L+++ +
Sbjct: 181 LLNFVWSLILCFLVV--VTFIYTMFWNMCTSVEHSQSCIDLTQFHFMFPPNTKLEDMKV 237


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,614,295
Number of Sequences: 53049
Number of extensions: 497436
Number of successful extensions: 1125
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1125
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)