Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060682.seq
         (632 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0027 - 25029725-25030017,25030097-25030211,25030347-250305...    48   5e-06
03_02_0583 + 9635002-9637299                                           28   7.1  

>05_06_0027 -
           25029725-25030017,25030097-25030211,25030347-25030504,
           25030582-25030682,25030846-25030994,25031089-25031239,
           25031329-25031482,25032249-25032321,25032446-25032676
          Length = 474

 Score = 48.4 bits (110), Expect = 5e-06
 Identities = 20/41 (48%), Positives = 30/41 (73%)
 Frame = +3

Query: 510 LLEADVNIRLVKNLRENVRAVIDFDEMAGGLNKRRMIQSAV 632
           LL++DV IR+V ++R N+R  ++ D +  G NKRR+IQ AV
Sbjct: 39  LLQSDVQIRMVSDMRANIRRAVNLDALPAGTNKRRIIQQAV 79


>03_02_0583 + 9635002-9637299
          Length = 765

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -1

Query: 500 ICFSIEFNTSSFIIVALLNDAKQWLFYGLNLLKPFW 393
           +  S+ F   +F  V L   A  +LF+ L +L  FW
Sbjct: 565 VALSLAFTAITFFAVGLAGGAGGFLFFALIVLASFW 600


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,932,223
Number of Sequences: 37544
Number of extensions: 267828
Number of successful extensions: 482
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 482
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)