Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060682.seq
         (632 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094660-1|AAM11013.1|  569|Drosophila melanogaster AT23778p pro...    81   1e-15
AF160891-1|AAD46831.1|  508|Drosophila melanogaster BcDNA.GM0948...    81   1e-15
AE014296-936|AAF50806.1|  508|Drosophila melanogaster CG4659-PA ...    81   1e-15
AE014134-2818|AAN10980.1| 1077|Drosophila melanogaster CG31784-P...    28   9.1  

>AY094660-1|AAM11013.1|  569|Drosophila melanogaster AT23778p
           protein.
          Length = 569

 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 40/41 (97%), Positives = 40/41 (97%)
 Frame = +3

Query: 510 LLEADVNIRLVKNLRENVRAVIDFDEMAGGLNKRRMIQSAV 632
           LLEADVNIRLVK LRENVRAVIDFDEMAGGLNKRRMIQSAV
Sbjct: 39  LLEADVNIRLVKQLRENVRAVIDFDEMAGGLNKRRMIQSAV 79



 Score = 41.5 bits (93), Expect = 0.001
 Identities = 18/22 (81%), Positives = 21/22 (95%)
 Frame = +1

Query: 442 SLSRATIINEEVLNSMLKQICA 507
           SLS+AT+INEE LNSMLK+ICA
Sbjct: 16  SLSKATVINEEALNSMLKEICA 37


>AF160891-1|AAD46831.1|  508|Drosophila melanogaster BcDNA.GM09489
           protein.
          Length = 508

 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 40/41 (97%), Positives = 40/41 (97%)
 Frame = +3

Query: 510 LLEADVNIRLVKNLRENVRAVIDFDEMAGGLNKRRMIQSAV 632
           LLEADVNIRLVK LRENVRAVIDFDEMAGGLNKRRMIQSAV
Sbjct: 39  LLEADVNIRLVKQLRENVRAVIDFDEMAGGLNKRRMIQSAV 79



 Score = 41.5 bits (93), Expect = 0.001
 Identities = 18/22 (81%), Positives = 21/22 (95%)
 Frame = +1

Query: 442 SLSRATIINEEVLNSMLKQICA 507
           SLS+AT+INEE LNSMLK+ICA
Sbjct: 16  SLSKATVINEEALNSMLKEICA 37


>AE014296-936|AAF50806.1|  508|Drosophila melanogaster CG4659-PA
           protein.
          Length = 508

 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 40/41 (97%), Positives = 40/41 (97%)
 Frame = +3

Query: 510 LLEADVNIRLVKNLRENVRAVIDFDEMAGGLNKRRMIQSAV 632
           LLEADVNIRLVK LRENVRAVIDFDEMAGGLNKRRMIQSAV
Sbjct: 39  LLEADVNIRLVKQLRENVRAVIDFDEMAGGLNKRRMIQSAV 79



 Score = 41.5 bits (93), Expect = 0.001
 Identities = 18/22 (81%), Positives = 21/22 (95%)
 Frame = +1

Query: 442 SLSRATIINEEVLNSMLKQICA 507
           SLS+AT+INEE LNSMLK+ICA
Sbjct: 16  SLSKATVINEEALNSMLKEICA 37


>AE014134-2818|AAN10980.1| 1077|Drosophila melanogaster CG31784-PB,
           isoform B protein.
          Length = 1077

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 16/67 (23%), Positives = 33/67 (49%)
 Frame = +1

Query: 301 ICFLINIYNYLQVKSVNSWQK*FLLIA*NLNQNGFSRFRP*NNHCFASLSRATIINEEVL 480
           +   + +Y++  +++  +W+   L +A  L    F   +  + H  A L     INEE+L
Sbjct: 585 VFIFLALYSFHHIRNPKNWK--ILEMASELELKRFRDRKTYDVHALAHLKNKKKINEELL 642

Query: 481 NSMLKQI 501
           N+M  ++
Sbjct: 643 NNMKSKL 649


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,818,941
Number of Sequences: 53049
Number of extensions: 489247
Number of successful extensions: 897
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)