Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060680.seq
(630 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g34100.1 68417.m04838 zinc finger (C3HC4-type RING finger) fa... 61 7e-10
At2g02960.5 68415.m00248 zinc finger (C3HC4-type RING finger) fa... 51 6e-07
At2g02960.4 68415.m00247 zinc finger (C3HC4-type RING finger) fa... 51 6e-07
At2g02960.3 68415.m00246 zinc finger (C3HC4-type RING finger) fa... 51 6e-07
At2g02960.2 68415.m00245 zinc finger (C3HC4-type RING finger) fa... 51 6e-07
At2g02960.1 68415.m00244 zinc finger (C3HC4-type RING finger) fa... 51 6e-07
At5g38070.1 68418.m04587 zinc finger (C3HC4-type RING finger) fa... 50 1e-06
At1g02610.1 68414.m00211 zinc finger (C3HC4-type RING finger) fa... 50 1e-06
At3g47550.6 68416.m05176 zinc finger (C3HC4-type RING finger) fa... 50 1e-06
At3g47550.5 68416.m05174 zinc finger (C3HC4-type RING finger) fa... 50 1e-06
At3g47550.4 68416.m05172 zinc finger (C3HC4-type RING finger) fa... 50 1e-06
At3g47550.3 68416.m05175 zinc finger (C3HC4-type RING finger) fa... 50 1e-06
At3g47550.2 68416.m05173 zinc finger (C3HC4-type RING finger) fa... 50 1e-06
At3g47550.1 68416.m05171 zinc finger (C3HC4-type RING finger) fa... 50 1e-06
At5g62460.1 68418.m07838 zinc finger (C3HC4-type RING finger) fa... 50 2e-06
At2g01275.1 68415.m00041 zinc finger (C3HC4-type RING finger) fa... 49 2e-06
At1g14260.2 68414.m01690 zinc finger (C3HC4-type RING finger) fa... 49 3e-06
At1g14260.1 68414.m01689 zinc finger (C3HC4-type RING finger) fa... 49 3e-06
At4g02075.1 68417.m00278 zinc finger (C3HC4-type RING finger) fa... 48 4e-06
At2g22120.1 68415.m02626 zinc finger (C3HC4-type RING finger) fa... 42 3e-04
At1g11020.1 68414.m01264 zinc finger (C3HC4-type RING finger) fa... 42 3e-04
At3g06330.1 68416.m00729 zinc finger (C3HC4-type RING finger) fa... 41 8e-04
At1g50440.2 68414.m05654 zinc finger (C3HC4-type RING finger) fa... 40 0.001
At1g50440.1 68414.m05653 zinc finger (C3HC4-type RING finger) fa... 40 0.001
At5g18760.1 68418.m02228 zinc finger (C3HC4-type RING finger) fa... 39 0.003
At5g03180.1 68418.m00266 zinc finger (C3HC4-type RING finger) fa... 36 0.022
At5g01070.1 68418.m00010 zinc finger (C3HC4-type RING finger) fa... 36 0.029
At5g60580.3 68418.m07597 zinc finger (C3HC4-type RING finger) fa... 34 0.068
At5g60580.2 68418.m07596 zinc finger (C3HC4-type RING finger) fa... 34 0.068
At5g60580.1 68418.m07595 zinc finger (C3HC4-type RING finger) fa... 34 0.068
At4g09130.1 68417.m01507 zinc finger (C3HC4-type RING finger) fa... 34 0.068
At3g09760.1 68416.m01156 zinc finger (C3HC4-type RING finger) fa... 34 0.089
At5g05830.1 68418.m00641 zinc finger (C3HC4-type RING finger) fa... 31 0.63
At2g45530.1 68415.m05662 zinc finger (C3HC4-type RING finger) fa... 30 1.1
At2g37950.1 68415.m04658 zinc finger (C3HC4-type RING finger) fa... 30 1.5
At1g07220.1 68414.m00768 expressed protein 28 4.4
At3g16540.1 68416.m02112 DegP protease, putative contains simila... 28 5.9
At5g46650.1 68418.m05748 zinc finger (C3HC4-type RING finger) fa... 27 7.8
At2g41910.1 68415.m05185 protein kinase family protein contains ... 27 7.8
>At4g34100.1 68417.m04838 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 1092
Score = 60.9 bits (141), Expect = 7e-10
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +2
Query: 389 DICRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQWL 502
D+CRIC + NPL PC CSGS+K+VHQ CL QWL
Sbjct: 66 DVCRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWL 103
>At2g02960.5 68415.m00248 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger); contains PROSITE
PS00190: Cytochrome c family heme-binding site signature
Length = 275
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +2
Query: 395 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQW 499
CRIC ES +N L +PC CSGSLKY H+ C+Q+W
Sbjct: 43 CRICSDESPVEN-LESPCACSGSLKYAHRKCVQRW 76
>At2g02960.4 68415.m00247 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger); contains PROSITE
PS00190: Cytochrome c family heme-binding site signature
Length = 271
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +2
Query: 395 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQW 499
CRIC ES +N L +PC CSGSLKY H+ C+Q+W
Sbjct: 43 CRICSDESPVEN-LESPCACSGSLKYAHRKCVQRW 76
>At2g02960.3 68415.m00246 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger); contains PROSITE
PS00190: Cytochrome c family heme-binding site signature
Length = 271
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +2
Query: 395 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQW 499
CRIC ES +N L +PC CSGSLKY H+ C+Q+W
Sbjct: 43 CRICSDESPVEN-LESPCACSGSLKYAHRKCVQRW 76
>At2g02960.2 68415.m00245 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger); contains PROSITE
PS00190: Cytochrome c family heme-binding site signature
Length = 271
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +2
Query: 395 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQW 499
CRIC ES +N L +PC CSGSLKY H+ C+Q+W
Sbjct: 43 CRICSDESPVEN-LESPCACSGSLKYAHRKCVQRW 76
>At2g02960.1 68415.m00244 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger); contains PROSITE
PS00190: Cytochrome c family heme-binding site signature
Length = 271
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +2
Query: 395 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQW 499
CRIC ES +N L +PC CSGSLKY H+ C+Q+W
Sbjct: 43 CRICSDESPVEN-LESPCACSGSLKYAHRKCVQRW 76
>At5g38070.1 68418.m04587 zinc finger (C3HC4-type RING finger)
family protein contains InterPro Entry IPR001841
Zn-finger, RING; contains PROSITE PS00190: Cytochrome c
family heme-binding site signature
Length = 259
Score = 50.4 bits (115), Expect = 1e-06
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +2
Query: 395 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQW 499
CRICH E E N + PC CSG+LK+ H +C+Q+W
Sbjct: 54 CRICHDEDEDTN-MDTPCSCSGTLKFAHHNCVQRW 87
>At1g02610.1 68414.m00211 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 146
Score = 50.4 bits (115), Expect = 1e-06
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +2
Query: 395 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQW 499
CRICH E E ++ APC CSG++K+ H+ C+Q+W
Sbjct: 20 CRICH-EEEAESYFEAPCSCSGTIKFAHRDCIQRW 53
>At3g47550.6 68416.m05176 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 288
Score = 50.0 bits (114), Expect = 1e-06
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +2
Query: 395 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQW 499
CRIC E +N L APC C+GSLKY H+ C+Q+W
Sbjct: 69 CRICQEEDSTKN-LEAPCACNGSLKYAHRKCVQRW 102
>At3g47550.5 68416.m05174 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 249
Score = 50.0 bits (114), Expect = 1e-06
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +2
Query: 395 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQW 499
CRIC E +N L APC C+GSLKY H+ C+Q+W
Sbjct: 69 CRICQEEDSTKN-LEAPCACNGSLKYAHRKCVQRW 102
>At3g47550.4 68416.m05172 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 232
Score = 50.0 bits (114), Expect = 1e-06
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +2
Query: 395 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQW 499
CRIC E +N L APC C+GSLKY H+ C+Q+W
Sbjct: 69 CRICQEEDSTKN-LEAPCACNGSLKYAHRKCVQRW 102
>At3g47550.3 68416.m05175 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 288
Score = 50.0 bits (114), Expect = 1e-06
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +2
Query: 395 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQW 499
CRIC E +N L APC C+GSLKY H+ C+Q+W
Sbjct: 69 CRICQEEDSTKN-LEAPCACNGSLKYAHRKCVQRW 102
>At3g47550.2 68416.m05173 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 249
Score = 50.0 bits (114), Expect = 1e-06
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +2
Query: 395 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQW 499
CRIC E +N L APC C+GSLKY H+ C+Q+W
Sbjct: 69 CRICQEEDSTKN-LEAPCACNGSLKYAHRKCVQRW 102
>At3g47550.1 68416.m05171 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 232
Score = 50.0 bits (114), Expect = 1e-06
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +2
Query: 395 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQW 499
CRIC E +N L APC C+GSLKY H+ C+Q+W
Sbjct: 69 CRICQEEDSTKN-LEAPCACNGSLKYAHRKCVQRW 102
>At5g62460.1 68418.m07838 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 307
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +2
Query: 395 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQW 499
CRIC E +N L +PC CSGSLKY H+ C+Q+W
Sbjct: 78 CRICQEEDSVKN-LESPCSCSGSLKYAHRKCVQRW 111
>At2g01275.1 68415.m00041 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger); contains PROSITE
PS00190: Cytochrome c family heme-binding site signature
Length = 259
Score = 49.2 bits (112), Expect = 2e-06
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +2
Query: 395 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQW 499
CRICH E N + PC CSGS+KY H+ C+Q+W
Sbjct: 59 CRICHDEDLDSN-METPCSCSGSVKYAHRRCVQRW 92
>At1g14260.2 68414.m01690 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 265
Score = 48.8 bits (111), Expect = 3e-06
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = +2
Query: 395 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQW 499
CRIC E + +N L +PC C+GSLKY H+ C+Q+W
Sbjct: 57 CRICQDECDIKN-LESPCACNGSLKYAHRKCVQRW 90
>At1g14260.1 68414.m01689 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 265
Score = 48.8 bits (111), Expect = 3e-06
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = +2
Query: 395 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQW 499
CRIC E + +N L +PC C+GSLKY H+ C+Q+W
Sbjct: 57 CRICQDECDIKN-LESPCACNGSLKYAHRKCVQRW 90
>At4g02075.1 68417.m00278 zinc finger (C3HC4-type RING finger)
family protein contains InterPro Entry IPR001841
Zn-finger, RING
Length = 218
Score = 48.4 bits (110), Expect = 4e-06
Identities = 17/35 (48%), Positives = 26/35 (74%)
Frame = +2
Query: 395 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQW 499
CRICH E E ++ PC CSG++K+ H++C+Q+W
Sbjct: 20 CRICH-EEEEESFFEVPCACSGTVKFAHRNCIQRW 53
>At2g22120.1 68415.m02626 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 252
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +2
Query: 395 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQW 499
CRIC E++ ++ +APC C G+ KYVH+ CL W
Sbjct: 35 CRIC-LETDGRD-FIAPCKCKGTSKYVHRDCLDHW 67
>At1g11020.1 68414.m01264 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 321
Score = 41.9 bits (94), Expect = 3e-04
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Frame = +2
Query: 395 CRICHCESEPQ---NPLLAPCYCSGSLKYVHQSCLQQWLTAPRXDLVSY-ANLTSSCTLK 562
CRIC E + + + L++PC C G+ ++VH+SCL W + S+ + L+
Sbjct: 63 CRIC-LEDDSELLGDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLR 121
Query: 563 SXPF---NEWR 586
PF N WR
Sbjct: 122 VEPFEDNNSWR 132
>At3g06330.1 68416.m00729 zinc finger (C3HC4-type RING finger)
family protein contains InterPro Entry IPR001841
Zn-finger, RING ; contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 426
Score = 40.7 bits (91), Expect = 8e-04
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 392 ICRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQWLT 505
+CRIC E N L C C G L+ VH++C +W +
Sbjct: 217 VCRICLDVCEEGNTLKMECSCKGDLRLVHEACAMKWFS 254
>At1g50440.2 68414.m05654 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 250
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +2
Query: 395 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQW 499
CRIC L+APC C G+ K+VH+SCL W
Sbjct: 64 CRICL--DVGGEDLIAPCNCKGTQKHVHRSCLDNW 96
>At1g50440.1 68414.m05653 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 250
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +2
Query: 395 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQW 499
CRIC L+APC C G+ K+VH+SCL W
Sbjct: 64 CRICL--DVGGEDLIAPCNCKGTQKHVHRSCLDNW 96
>At5g18760.1 68418.m02228 zinc finger (C3HC4-type RING finger)
family protein predicted proteins, Arabidopsis thaliana
; contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 411
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 392 ICRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQWLT 505
+CRIC E N L C C G L+ VH+ C +W +
Sbjct: 202 VCRICLDVCEEGNTLKMECSCKGDLRLVHEHCAIKWFS 239
>At5g03180.1 68418.m00266 zinc finger (C3HC4-type RING finger)
family protein various predicted proteins, Arabidopsis
thaliana ; contains Pfam profile PF00097: Zinc finger,
C3HC4 type (RING finger)
Length = 462
Score = 35.9 bits (79), Expect = 0.022
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +2
Query: 392 ICRICHCE-SEPQNPLLAPCYCSGSLKYVHQSCLQQWLT 505
+CRIC E E + C C G L H++C +W T
Sbjct: 246 VCRICMVEMEEDEEAFKMECMCKGELALAHKTCTIKWFT 284
>At5g01070.1 68418.m00010 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 124
Score = 35.5 bits (78), Expect = 0.029
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = +2
Query: 395 CRICHCESEPQ-----NPLLAPCYCSGSLKYVHQSCLQQW 499
CRICH E +P++ C C L YVH+ C W
Sbjct: 78 CRICHLGLESSRHECGDPMVLGCSCKDDLGYVHKQCADTW 117
>At5g60580.3 68418.m07597 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 487
Score = 34.3 bits (75), Expect = 0.068
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +2
Query: 392 ICRICHCE-SEPQNPLLAPCYCSGSLKYVHQSCLQQWLT 505
+CRIC E E L C C G L H+ C +W T
Sbjct: 256 VCRICLVELCEGGETLKMECSCKGELALAHKDCALKWFT 294
>At5g60580.2 68418.m07596 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 494
Score = 34.3 bits (75), Expect = 0.068
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +2
Query: 392 ICRICHCE-SEPQNPLLAPCYCSGSLKYVHQSCLQQWLT 505
+CRIC E E L C C G L H+ C +W T
Sbjct: 256 VCRICLVELCEGGETLKMECSCKGELALAHKDCALKWFT 294
>At5g60580.1 68418.m07595 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 487
Score = 34.3 bits (75), Expect = 0.068
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +2
Query: 392 ICRICHCE-SEPQNPLLAPCYCSGSLKYVHQSCLQQWLT 505
+CRIC E E L C C G L H+ C +W T
Sbjct: 256 VCRICLVELCEGGETLKMECSCKGELALAHKDCALKWFT 294
>At4g09130.1 68417.m01507 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 357
Score = 34.3 bits (75), Expect = 0.068
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +2
Query: 395 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQWLTAPRXDLVSYANLT 544
C IC CE E + PL CS + H +C+ +WL++ V ANL+
Sbjct: 120 CAICLCEFEDEEPLRWMPPCSHTF---HANCIDEWLSSRSTCPVCRANLS 166
>At3g09760.1 68416.m01156 zinc finger (C3HC4-type RING finger)
family protein ; contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 491
Score = 33.9 bits (74), Expect = 0.089
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +2
Query: 392 ICRICHCE-SEPQNPLLAPCYCSGSLKYVHQSCLQQWLT 505
+CRIC E E C C G L H+ C +W T
Sbjct: 265 VCRICLVELGEDSEAFKMECLCRGELALAHKECTIKWFT 303
>At5g05830.1 68418.m00641 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger); contains PROSITE
PS00190: Cytochrome c family heme-binding site signature
Length = 204
Score = 31.1 bits (67), Expect = 0.63
Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 5/40 (12%)
Frame = +2
Query: 395 CRICHCESEPQN-----PLLAPCYCSGSLKYVHQSCLQQW 499
CRICH + N P+ C C L H+ C + W
Sbjct: 79 CRICHMSLDAANLESGVPIELGCSCKADLAAAHKHCAETW 118
>At2g45530.1 68415.m05662 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 240
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 395 CRICHCESEPQNPLLAPCYCSGSLKYVHQSCLQQW 499
CR+C + E L C C G L H+SC+ W
Sbjct: 74 CRVCLQDKEEVLIELG-CQCRGGLAKAHRSCIDAW 107
>At2g37950.1 68415.m04658 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger); contains PROSITE
PS00190: Cytochrome c family heme-binding site signature
Length = 207
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Frame = +2
Query: 395 CRICHC--ESEPQNPLLAPCYCSGSLKYVHQSCLQQW 499
CRICH E+ + C C L H+ C + W
Sbjct: 84 CRICHLGVETSGGGAIELGCSCKDDLAVAHRQCAETW 120
>At1g07220.1 68414.m00768 expressed protein
Length = 507
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -2
Query: 371 MMFDCSQTQSVQFLYHNHRPIPNFQFPMNSSHL 273
MMFDC + + P+P F++ N +HL
Sbjct: 193 MMFDCMDKPIINQTEYQSFPVPLFRYCTNEAHL 225
>At3g16540.1 68416.m02112 DegP protease, putative contains
similarity to DegP2 protease GI:13172275 from
[Arabidopsis thaliana]
Length = 555
Score = 27.9 bits (59), Expect = 5.9
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = -2
Query: 515 VSVPSTTAASNSGVRI*GFLNNNMGPTMGSVVHSHNGIYDKYLRWSCCMMFDCSQTQSVQ 336
V + T S R+ +N G+ V NG+ K L+ C ++ +CS T+ ++
Sbjct: 430 VPLTKTYLDSEHHQRLADDINEGYQSLYGAQVEKVNGVEVKNLKHLCELIEECS-TEDLR 488
Query: 335 FLYHNHRP-IPNFQFPMNSSHLFVER 261
+ NH+ + N++ ++ +ER
Sbjct: 489 LEFKNHKVLVLNYESAKKATLQILER 514
>At5g46650.1 68418.m05748 zinc finger (C3HC4-type RING finger)
family protein contains similarity to RING-H2 zinc
finger protein ATL6 [Arabidopsis thaliana] GI:4928403;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 289
Score = 27.5 bits (58), Expect = 7.8
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +2
Query: 395 CRICHCESEPQN---PLLAPCYCSGSLKYVHQSCLQQWLTAPRXDLVSYANL 541
C IC E E ++ LL CY HQ C+ QWL + + V NL
Sbjct: 114 CAICLLEFEEEHILLRLLTTCY-----HVFHQECIDQWLESNKTCPVCRRNL 160
>At2g41910.1 68415.m05185 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 373
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 176 HECHFSFQVNRKCILTYCNFCVNTFFIMPV 265
H CH + + C YC+ CV F I+ V
Sbjct: 340 HICHLAQPSQKICFFIYCSLCV-VFIILTV 368
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,296,272
Number of Sequences: 28952
Number of extensions: 235173
Number of successful extensions: 634
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 630
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1285411824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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