Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060679.seq
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    23   2.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   3.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   3.7  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   4.9  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   4.9  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   4.9  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   8.6  

>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -2

Query: 280 RHHNEWLQNIICKTKLMYCYCECLL 206
           ++ N  L+N++   +L+  Y +CLL
Sbjct: 29  KYDNIDLENVVKNERLLKSYVDCLL 53


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 472  DVTWPTFESKLVPS*SPRSTGKLNE 546
            +V+W T E  +VP   P +  K+ E
Sbjct: 1029 NVSWGTREVTVVPKPDPNAVQKIEE 1053


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 472  DVTWPTFESKLVPS*SPRSTGKLNE 546
            +V+W T E  +VP   P +  K+ E
Sbjct: 1029 NVSWGTREVTVVPKPDPNAVQKIEE 1053


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -2

Query: 553 YCTRLVFQYSAV 518
           YCT L++ Y+A+
Sbjct: 54  YCTHLIYGYAAI 65


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 56  YSLGFLLISIIVNSAFRI*TNKVKQYLISSLLVYV 160
           Y   + L+S+   S FRI TN+    +I+  L+++
Sbjct: 61  YITSYTLLSVY--SLFRIATNENNSLVINKRLIFI 93


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 56  YSLGFLLISIIVNSAFRI*TNKVKQYLISSLLVYV 160
           Y   + L+S+   S FRI TN+    +I+  L+++
Sbjct: 61  YITSYTLLSVY--SLFRIATNENNSLVINKRLIFI 93


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 258 KTLSVKQN*CIVIVSAYCSTSFL 190
           K  +VKQ   ++++   CST F+
Sbjct: 259 KINTVKQTIAVIVMYIACSTPFI 281


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,636
Number of Sequences: 336
Number of extensions: 3151
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)