Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060678.seq
         (626 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   0.91 
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   1.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.7  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   8.4  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   8.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +2

Query: 95   NNWYSIIGNHGTASRCVPQIHYN 163
            +++Y  +  H     C P +HYN
Sbjct: 1219 SSFYVCVNGHLVPQNCAPGLHYN 1241


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/22 (40%), Positives = 17/22 (77%)
 Frame = -3

Query: 354 NII*IKLSH*LQSNVIEFPNDS 289
           +++ +KL+H L S+V  FP+D+
Sbjct: 16  SLLTLKLTHALSSSVQNFPSDA 37


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = +3

Query: 183 LKKKNVSITNIILHSLQ 233
           +KK+  +++N+ LHSL+
Sbjct: 14  VKKRKCTVSNVSLHSLK 30


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +1

Query: 313 IRLQLVG*FNLYYIKYTTVNDYEMTRLNRTQSTN 414
           + LQ     N+  ++Y  +N+Y  T +  T  T+
Sbjct: 194 MELQYCHYLNILRVRYQLLNEYLETLVQETNRTS 227


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +1

Query: 313 IRLQLVG*FNLYYIKYTTVNDYEMTRLNRTQSTN 414
           + LQ     N+  ++Y  +N+Y  T +  T  T+
Sbjct: 194 MELQYCHYLNILRVRYQLLNEYLETLVQETNRTS 227


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,216
Number of Sequences: 336
Number of extensions: 2251
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)