Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060678.seq
         (626 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC032672-1|AAH32672.1|  273|Homo sapiens HVCN1 protein protein.        30   5.8  
BC009731-1|AAH09731.1|  273|Homo sapiens hydrogen voltage-gated ...    30   5.8  
BC007277-1|AAH07277.1|  236|Homo sapiens HVCN1 protein protein.        30   5.8  
AY359054-1|AAQ89413.1|  255|Homo sapiens ATWD578 protein.              30   5.8  

>BC032672-1|AAH32672.1|  273|Homo sapiens HVCN1 protein protein.
          Length = 273

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -1

Query: 170 AKRCSEFAGHTGLRSRDYQLWNTSYYKCEN 81
           A+R S+F  H  +   DY  WN +Y K EN
Sbjct: 18  AERMSKFLRHFTVVGDDYHAWNINYKKWEN 47


>BC009731-1|AAH09731.1|  273|Homo sapiens hydrogen voltage-gated
           channel 1 protein.
          Length = 273

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -1

Query: 170 AKRCSEFAGHTGLRSRDYQLWNTSYYKCEN 81
           A+R S+F  H  +   DY  WN +Y K EN
Sbjct: 18  AERMSKFLRHFTVVGDDYHAWNINYKKWEN 47


>BC007277-1|AAH07277.1|  236|Homo sapiens HVCN1 protein protein.
          Length = 236

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -1

Query: 170 AKRCSEFAGHTGLRSRDYQLWNTSYYKCEN 81
           A+R S+F  H  +   DY  WN +Y K EN
Sbjct: 18  AERMSKFLRHFTVVGDDYHAWNINYKKWEN 47


>AY359054-1|AAQ89413.1|  255|Homo sapiens ATWD578 protein.
          Length = 255

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -1

Query: 170 AKRCSEFAGHTGLRSRDYQLWNTSYYKCEN 81
           A+R S+F  H  +   DY  WN +Y K EN
Sbjct: 18  AERMSKFLRHFTVVGDDYHAWNINYKKWEN 47


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,908,969
Number of Sequences: 237096
Number of extensions: 1094455
Number of successful extensions: 1189
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1189
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)