Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060677.seq
         (631 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   4.9  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   8.5  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +1

Query: 139 STTVLLLYCDTQSCVLAGNIR*DIY*TTCTRGIKTFTSKAMRLSSFHYDVF 291
           +TT LLL+CD    ++  +I    +  +  R     T+ A+ L    Y +F
Sbjct: 12  NTTKLLLWCDQTIGLITFDINTPSFKLSKIRSFLNITASAVLLPFAIYHIF 62


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 416 SFCGNGGRLERW 451
           S CGNG R + W
Sbjct: 45  SSCGNGNRCDLW 56


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 355 IFYVCCLFYGGLRVFRRRIN 414
           IFY C  + GG     +R N
Sbjct: 436 IFYYCLAYNGGFVPLEQRCN 455


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,237
Number of Sequences: 336
Number of extensions: 3075
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)