Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060676.seq
         (630 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    23   1.6  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          23   1.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   2.1  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   2.1  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   3.7  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   3.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.9  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.5  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   8.5  

>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
 Frame = -1

Query: 627 EFHASKFIC--KCVEEVEGL-VIEHSLKEWRRTR 535
           EFH SK++C  + ++  + L + E  +K W + R
Sbjct: 103 EFHRSKYLCRPRRIQMAQNLNLTERQIKIWFQNR 136


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
 Frame = -1

Query: 627 EFHASKFIC--KCVEEVEGL-VIEHSLKEWRRTR 535
           EFH SK++C  + ++  + L + E  +K W + R
Sbjct: 123 EFHRSKYLCRPRRIQMAQNLNLTERQIKIWFQNR 156


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/36 (30%), Positives = 15/36 (41%)
 Frame = +1

Query: 436 QCGFCPRFCYSRRHNSFPFWSHFYGNHRLFQSRPGT 543
           QC   P   +    N     +HF+ +H  FQ   GT
Sbjct: 154 QCPIHPGMTFRYHFNVHNSGTHFWHSHSGFQRSDGT 189


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 51  LDLALVADPALQFVILLGDPCQTVYSSVNPDSSNY 155
           L L L+    + FV+LLGD   T+Y  +  + + Y
Sbjct: 213 LILDLLVFITINFVVLLGDLYVTLYIILTNNQAKY 247


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +1

Query: 466 SRRHNSFPFWSHFYGNHRLFQSRPGTAPLFEAMLNDQPFNFLNTFANE 609
           S  +NSF     FY +     S+   AP  E   +   FNFL+  AN+
Sbjct: 474 SDNYNSF---HQFYSSE---SSQNQVAPTGENSNSSSDFNFLSNLAND 515


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +1

Query: 466 SRRHNSFPFWSHFYGNHRLFQSRPGTAPLFEAMLNDQPFNFLNTFANE 609
           S  +NSF     FY +     S+   AP  E   +   FNFL+  AN+
Sbjct: 422 SDNYNSF---HQFYSSE---SSQNQVAPTGENSNSSSDFNFLSNLAND 463


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = +3

Query: 354 PVQAIERSLFAPLKVQLSRLLPKSSSTP-MW 443
           P+ A     FA      S L PK++S+P +W
Sbjct: 280 PIGASHLPYFAAAVAAASNLSPKTNSSPDLW 310


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 364 PSSAHFLLLSRF 399
           P SAHF  +SRF
Sbjct: 68  PISAHFSFMSRF 79


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 364 PSSAHFLLLSRF 399
           P SAHF  +SRF
Sbjct: 24  PISAHFSFMSRF 35


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,065
Number of Sequences: 336
Number of extensions: 3045
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)