Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060676.seq
         (630 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069439-1|AAL39584.1|  612|Drosophila melanogaster LD15062p pro...    29   6.9  
AE014298-694|AAS65260.1|  621|Drosophila melanogaster CG4068-PB,...    29   6.9  
AE014298-693|AAF45997.2|  621|Drosophila melanogaster CG4068-PA,...    29   6.9  
AF132150-1|AAD34738.1|  313|Drosophila melanogaster unknown prot...    28   9.1  
AE014297-2628|AAF55637.1|  313|Drosophila melanogaster CG5629-PB...    28   9.1  
AE014297-2627|AAN13797.1|  313|Drosophila melanogaster CG5629-PA...    28   9.1  

>AY069439-1|AAL39584.1|  612|Drosophila melanogaster LD15062p
           protein.
          Length = 612

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
 Frame = +1

Query: 328 KSADGASLCRYRPSSAHFLLLSRFNFPG-SCPNLRRLQCGFCPRFC--YSRRHNSFPFWS 498
           +SADG  +CR + SS+ F    ++      C NL   + G     C    +R+   P  S
Sbjct: 11  RSADGCCICRAKSSSSRFTASRKYEKESMQCFNLNEPRNGEICNACVLLVKRYKRLPIGS 70

Query: 499 HFYGNHRL-FQSRPGTAPLFEAMLND 573
             +  H +  ++ PGT  + +    D
Sbjct: 71  KRHWGHVVDARAGPGTKSMAKQKKRD 96


>AE014298-694|AAS65260.1|  621|Drosophila melanogaster CG4068-PB,
           isoform B protein.
          Length = 621

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
 Frame = +1

Query: 328 KSADGASLCRYRPSSAHFLLLSRFNFPG-SCPNLRRLQCGFCPRFC--YSRRHNSFPFWS 498
           +SADG  +CR + SS+ F    ++      C NL   + G     C    +R+   P  S
Sbjct: 11  RSADGCCICRAKSSSSRFTASRKYEKESMQCFNLNEPRNGEICNACVLLVKRYKRLPIGS 70

Query: 499 HFYGNHRL-FQSRPGTAPLFEAMLND 573
             +  H +  ++ PGT  + +    D
Sbjct: 71  KRHWGHVVDARAGPGTKSMAKQKKRD 96


>AE014298-693|AAF45997.2|  621|Drosophila melanogaster CG4068-PA,
           isoform A protein.
          Length = 621

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
 Frame = +1

Query: 328 KSADGASLCRYRPSSAHFLLLSRFNFPG-SCPNLRRLQCGFCPRFC--YSRRHNSFPFWS 498
           +SADG  +CR + SS+ F    ++      C NL   + G     C    +R+   P  S
Sbjct: 11  RSADGCCICRAKSSSSRFTASRKYEKESMQCFNLNEPRNGEICNACVLLVKRYKRLPIGS 70

Query: 499 HFYGNHRL-FQSRPGTAPLFEAMLND 573
             +  H +  ++ PGT  + +    D
Sbjct: 71  KRHWGHVVDARAGPGTKSMAKQKKRD 96


>AF132150-1|AAD34738.1|  313|Drosophila melanogaster unknown
           protein.
          Length = 313

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +1

Query: 97  FSETHAKPSILPSIRTLLIIVCFPKSNISNRIVIFTVTGPT 219
           F  TH  P+     R+LL   C   + + NRIV+ T  G T
Sbjct: 7   FYNTHLPPADFEDNRSLLKEFCERHNKLQNRIVLVTSGGTT 47


>AE014297-2628|AAF55637.1|  313|Drosophila melanogaster CG5629-PB,
           isoform B protein.
          Length = 313

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +1

Query: 97  FSETHAKPSILPSIRTLLIIVCFPKSNISNRIVIFTVTGPT 219
           F  TH  P+     R+LL   C   + + NRIV+ T  G T
Sbjct: 7   FYNTHLPPADFEDNRSLLKEFCERHNKLQNRIVLVTSGGTT 47


>AE014297-2627|AAN13797.1|  313|Drosophila melanogaster CG5629-PA,
           isoform A protein.
          Length = 313

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +1

Query: 97  FSETHAKPSILPSIRTLLIIVCFPKSNISNRIVIFTVTGPT 219
           F  TH  P+     R+LL   C   + + NRIV+ T  G T
Sbjct: 7   FYNTHLPPADFEDNRSLLKEFCERHNKLQNRIVLVTSGGTT 47


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,306,674
Number of Sequences: 53049
Number of extensions: 573390
Number of successful extensions: 1695
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1695
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)