BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV060676.seq (630 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY069439-1|AAL39584.1| 612|Drosophila melanogaster LD15062p pro... 29 6.9 AE014298-694|AAS65260.1| 621|Drosophila melanogaster CG4068-PB,... 29 6.9 AE014298-693|AAF45997.2| 621|Drosophila melanogaster CG4068-PA,... 29 6.9 AF132150-1|AAD34738.1| 313|Drosophila melanogaster unknown prot... 28 9.1 AE014297-2628|AAF55637.1| 313|Drosophila melanogaster CG5629-PB... 28 9.1 AE014297-2627|AAN13797.1| 313|Drosophila melanogaster CG5629-PA... 28 9.1 >AY069439-1|AAL39584.1| 612|Drosophila melanogaster LD15062p protein. Length = 612 Score = 28.7 bits (61), Expect = 6.9 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 4/86 (4%) Frame = +1 Query: 328 KSADGASLCRYRPSSAHFLLLSRFNFPG-SCPNLRRLQCGFCPRFC--YSRRHNSFPFWS 498 +SADG +CR + SS+ F ++ C NL + G C +R+ P S Sbjct: 11 RSADGCCICRAKSSSSRFTASRKYEKESMQCFNLNEPRNGEICNACVLLVKRYKRLPIGS 70 Query: 499 HFYGNHRL-FQSRPGTAPLFEAMLND 573 + H + ++ PGT + + D Sbjct: 71 KRHWGHVVDARAGPGTKSMAKQKKRD 96 >AE014298-694|AAS65260.1| 621|Drosophila melanogaster CG4068-PB, isoform B protein. Length = 621 Score = 28.7 bits (61), Expect = 6.9 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 4/86 (4%) Frame = +1 Query: 328 KSADGASLCRYRPSSAHFLLLSRFNFPG-SCPNLRRLQCGFCPRFC--YSRRHNSFPFWS 498 +SADG +CR + SS+ F ++ C NL + G C +R+ P S Sbjct: 11 RSADGCCICRAKSSSSRFTASRKYEKESMQCFNLNEPRNGEICNACVLLVKRYKRLPIGS 70 Query: 499 HFYGNHRL-FQSRPGTAPLFEAMLND 573 + H + ++ PGT + + D Sbjct: 71 KRHWGHVVDARAGPGTKSMAKQKKRD 96 >AE014298-693|AAF45997.2| 621|Drosophila melanogaster CG4068-PA, isoform A protein. Length = 621 Score = 28.7 bits (61), Expect = 6.9 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 4/86 (4%) Frame = +1 Query: 328 KSADGASLCRYRPSSAHFLLLSRFNFPG-SCPNLRRLQCGFCPRFC--YSRRHNSFPFWS 498 +SADG +CR + SS+ F ++ C NL + G C +R+ P S Sbjct: 11 RSADGCCICRAKSSSSRFTASRKYEKESMQCFNLNEPRNGEICNACVLLVKRYKRLPIGS 70 Query: 499 HFYGNHRL-FQSRPGTAPLFEAMLND 573 + H + ++ PGT + + D Sbjct: 71 KRHWGHVVDARAGPGTKSMAKQKKRD 96 >AF132150-1|AAD34738.1| 313|Drosophila melanogaster unknown protein. Length = 313 Score = 28.3 bits (60), Expect = 9.1 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = +1 Query: 97 FSETHAKPSILPSIRTLLIIVCFPKSNISNRIVIFTVTGPT 219 F TH P+ R+LL C + + NRIV+ T G T Sbjct: 7 FYNTHLPPADFEDNRSLLKEFCERHNKLQNRIVLVTSGGTT 47 >AE014297-2628|AAF55637.1| 313|Drosophila melanogaster CG5629-PB, isoform B protein. Length = 313 Score = 28.3 bits (60), Expect = 9.1 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = +1 Query: 97 FSETHAKPSILPSIRTLLIIVCFPKSNISNRIVIFTVTGPT 219 F TH P+ R+LL C + + NRIV+ T G T Sbjct: 7 FYNTHLPPADFEDNRSLLKEFCERHNKLQNRIVLVTSGGTT 47 >AE014297-2627|AAN13797.1| 313|Drosophila melanogaster CG5629-PA, isoform A protein. Length = 313 Score = 28.3 bits (60), Expect = 9.1 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = +1 Query: 97 FSETHAKPSILPSIRTLLIIVCFPKSNISNRIVIFTVTGPT 219 F TH P+ R+LL C + + NRIV+ T G T Sbjct: 7 FYNTHLPPADFEDNRSLLKEFCERHNKLQNRIVLVTSGGTT 47 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 28,306,674 Number of Sequences: 53049 Number of extensions: 573390 Number of successful extensions: 1695 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1618 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1695 length of database: 24,988,368 effective HSP length: 82 effective length of database: 20,638,350 effective search space used: 2621070450 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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