Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060675.seq
         (634 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   1.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   3.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   3.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   3.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   3.7  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   4.9  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   4.9  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   4.9  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    22   4.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   4.9  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.6  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   8.6  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   8.6  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   8.6  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   8.6  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/18 (61%), Positives = 11/18 (61%), Gaps = 5/18 (27%)
 Frame = +2

Query: 551 MGYH-----FTCATCGVE 589
           MGYH     FTC  CGVE
Sbjct: 490 MGYHGFHNPFTCNMCGVE 507


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +3

Query: 42  LIKTRFFSLPNASLFLATMSLDNMYCTR 125
           L+K   ++LP +++ +A + +DN  C R
Sbjct: 533 LLKRENYTLPASAVGIAWLYVDNDCCIR 560


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 396 SLQMPVLSSMLVEHCAMY 449
           +L +PVL S L+  C MY
Sbjct: 167 NLSVPVLLSGLIAMCGMY 184


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 396 SLQMPVLSSMLVEHCAMY 449
           +L +PVL S L+  C MY
Sbjct: 400 NLSVPVLLSGLIAMCGMY 417


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 396 SLQMPVLSSMLVEHCAMY 449
           +L +PVL S L+  C MY
Sbjct: 400 NLSVPVLLSGLIAMCGMY 417


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 397 LYITLFTSEAGRMPIRVHRLYNAANHK 317
           +Y    T+  GR+PI  + LY    HK
Sbjct: 314 VYDASITASLGRVPIWPYTLYFRMPHK 340


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 397 LYITLFTSEAGRMPIRVHRLYNAANHK 317
           +Y    T+  GR+PI  + LY    HK
Sbjct: 321 VYDASITASLGRVPIWPYTLYFRMPHK 347


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/24 (33%), Positives = 9/24 (37%)
 Frame = +2

Query: 437 LCHVCNARIKADGLQNYMCHKCHG 508
           LC +C  R        Y C  C G
Sbjct: 85  LCSICGDRASGKHYGVYSCEGCKG 108


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -1

Query: 424 MLDKTGIC 401
           MLDKTGIC
Sbjct: 95  MLDKTGIC 102


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 189 NCFVCAQCFRMFPDGVFYE 245
           NC    +C+ +F DG+  E
Sbjct: 527 NCTASTRCWEVFMDGICNE 545


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 315 SPHFAQHGANKTWKSCSQYFLPQI 244
           +P   +H  +   K CS + LP+I
Sbjct: 294 APPGVEHFEDVVHKKCSNFTLPEI 317



 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 216 RMFPDGVFYEFEGESIVNRI 275
           R+ PDGVF  F  + IV ++
Sbjct: 591 RVLPDGVFVAFLLKHIVPKL 610


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 586 NSTGSTGKVIAHGKLLPDNVKV 521
           N+TG+  +  AHG   PD + V
Sbjct: 37  NTTGAVVECSAHGNPTPDIIWV 58


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 156 IVNSNGELWHTNC 194
           ++N N  LW+ NC
Sbjct: 168 MINMNCALWYINC 180


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 156 IVNSNGELWHTNC 194
           ++N N  LW+ NC
Sbjct: 168 MINMNCALWYINC 180


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 156 IVNSNGELWHTNC 194
           ++N N  LW+ NC
Sbjct: 168 MINMNCALWYINC 180


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 237 FYEFEGESIVNRISKFYLHH 296
           FY +EG +  N +  FYL H
Sbjct: 356 FY-YEGPNSENNLDNFYLIH 374


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,998
Number of Sequences: 336
Number of extensions: 4072
Number of successful extensions: 19
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)