Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060672.seq
(691 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 62 5e-10
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 54 8e-08
08_01_0397 - 3509186-3510291,3510322-3512335 52 3e-07
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 50 2e-06
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 48 7e-06
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 43 2e-04
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 42 3e-04
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 42 3e-04
06_03_0287 - 19168685-19168735,19168847-19168884,19169517-191697... 38 0.008
03_05_0865 - 28365430-28367640 38 0.010
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 33 0.16
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 33 0.21
02_01_0381 - 2764331-2764342,2768966-2769907 32 0.49
06_03_1255 + 28780181-28781172,28782065-28782932 31 0.65
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 31 0.86
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 30 1.5
03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773... 30 2.0
03_02_0189 - 6253659-6255380 30 2.0
01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237,448... 30 2.0
02_05_0064 - 25529630-25531440,25531663-25531673,25533113-255331... 29 2.6
01_05_0722 + 24598426-24598649,24599113-24599219,24599319-245993... 29 2.6
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 29 3.5
06_03_0337 + 19678152-19678484,19678616-19678801,19679232-196794... 29 3.5
01_05_0721 + 24594815-24594834,24595207-24595313,24595417-245954... 29 3.5
01_01_0447 - 3327727-3328144,3328438-3328688,3328820-3328909,332... 29 3.5
12_02_1076 - 25862671-25863159,25863290-25863451,25863614-258638... 29 4.6
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 29 4.6
09_05_0008 + 20042390-20042845,20043323-20043457,20043539-200436... 29 4.6
03_01_0059 + 484305-484617,484919-485406,485608-486092,486185-48... 29 4.6
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 28 6.1
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 28 6.1
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 28 6.1
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 28 8.0
07_01_0322 - 2258067-2258519,2258620-2258781,2258896-2259159,225... 28 8.0
05_05_0226 + 23442971-23443857,23444209-23446324 28 8.0
03_06_0531 + 34552206-34552598,34552665-34552735,34553363-345533... 28 8.0
01_04_0011 + 15067536-15068236,15068283-15068898 28 8.0
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 61.7 bits (143), Expect = 5e-10
Identities = 41/140 (29%), Positives = 57/140 (40%)
Frame = +3
Query: 255 PDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGR*GS*SYSIL*RSKFS* 434
P D SL PF KNFY P V S +V +YR ++TV G + F
Sbjct: 106 PKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPD 165
Query: 435 LCATRCKDNGLQRTDAYSSSRLADSMSGKNLVGVLKRVPAKRWPTSCQPLCT*TTNRLFR 614
C +G S ++ G++++G+ + K L
Sbjct: 166 YCMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLE 225
Query: 615 RGDGPIALVLGATRELAQQI 674
+GDGPI L+L TRELA QI
Sbjct: 226 QGDGPIVLILAPTRELAVQI 245
Score = 60.9 bits (141), Expect = 9e-10
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = +1
Query: 382 GVEVHNXIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 507
G +V ++YF+EANFPDY Q + G+ EPTPIQ+QGWP+
Sbjct: 148 GHDVPKPVRYFQEANFPDYCMQAIAKSGFVEPTPIQSQGWPM 189
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +2
Query: 539 QTGSGKTLAYILPAIVHINNQPPISE 616
QTGSGKTL+Y+LP +VH+ QP + +
Sbjct: 201 QTGSGKTLSYLLPGLVHVGAQPRLEQ 226
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 54.4 bits (125), Expect = 8e-08
Identities = 44/145 (30%), Positives = 57/145 (39%)
Frame = +3
Query: 240 SEHASPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGR*GS*SYSIL*R 419
S A+ D D L F KNFY P+V + EVE YR E+TV GR
Sbjct: 38 SAAAAADLDG--LPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRD 95
Query: 420 SKFS*LCATRCKDNGLQRTDAYSSSRLADSMSGKNLVGVLKRVPAKRWPTSCQPLCT*TT 599
F G S ++ G++L+G+ + K +
Sbjct: 96 VGFPEYVLQEITKAGFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNA 155
Query: 600 NRLFRRGDGPIALVLGATRELAQQI 674
+ GDGPI LVL TRELA QI
Sbjct: 156 QPILAPGDGPIVLVLAPTRELAVQI 180
Score = 50.0 bits (114), Expect = 2e-06
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +1
Query: 382 GVEVHNXIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 507
G +V ++ F + FP+YV Q + G+ EPTPIQ+QGWP+
Sbjct: 83 GRDVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQGWPM 124
Score = 44.4 bits (100), Expect = 9e-05
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +2
Query: 539 QTGSGKTLAYILPAIVHINNQP 604
+TGSGKTLAY+LPAIVH+N QP
Sbjct: 136 ETGSGKTLAYLLPAIVHVNAQP 157
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 52.4 bits (120), Expect = 3e-07
Identities = 39/139 (28%), Positives = 56/139 (40%)
Frame = +3
Query: 258 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGR*GS*SYSIL*RSKFS*L 437
D + QPF KNFY + K + EV YR E+ V G+ +S +
Sbjct: 375 DHSKIDYQPFRKNFYIEVKDITKMAAEEVAAYRKQLELKVHGKDVPKPIKTWVQSGLTSK 434
Query: 438 CATRCKDNGLQRTDAYSSSRLADSMSGKNLVGVLKRVPAKRWPTSCQPLCT*TTNRLFRR 617
K G ++ + + L MSG++ +G+ K K L
Sbjct: 435 LLDTIKKLGFEKPMSIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQPAVVP 494
Query: 618 GDGPIALVLGATRELAQQI 674
GDGPI L++ TREL QI
Sbjct: 495 GDGPIGLIMAPTRELVVQI 513
Score = 36.7 bits (81), Expect = 0.017
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +2
Query: 539 QTGSGKTLAYILPAIVHINNQPPI 610
+TGSGKTLA++LP + H+ +QP +
Sbjct: 469 KTGSGKTLAFVLPMLRHVKDQPAV 492
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 50.0 bits (114), Expect = 2e-06
Identities = 35/139 (25%), Positives = 56/139 (40%)
Frame = +3
Query: 258 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGR*GS*SYSIL*RSKFS*L 437
D ++ +PFNK+FY+ P+V S EV +Y + + VSG F
Sbjct: 170 DHSTIEYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQ 229
Query: 438 CATRCKDNGLQRTDAYSSSRLADSMSGKNLVGVLKRVPAKRWPTSCQPLCT*TTNRLFRR 617
G ++ L +SG++++G+ K K + +
Sbjct: 230 LMNAIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEK 289
Query: 618 GDGPIALVLGATRELAQQI 674
+GPI +V TRELA QI
Sbjct: 290 EEGPIGVVCAPTRELAHQI 308
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 48.0 bits (109), Expect = 7e-06
Identities = 38/139 (27%), Positives = 54/139 (38%)
Frame = +3
Query: 258 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGR*GS*SYSIL*RSKFS*L 437
D + QPF KN Y + + EV YR N E+ V G+ +S +
Sbjct: 236 DHSKIEYQPFRKNLYIEVKDITMMTGEEVATYRKNLELKVHGKDVPKPIKTWVQSGLTSK 295
Query: 438 CATRCKDNGLQRTDAYSSSRLADSMSGKNLVGVLKRVPAKRWPTSCQPLCT*TTNRLFRR 617
K G ++ + L MSG++ +G+ K K L
Sbjct: 296 LLDTIKKLGFEKPMPIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQPPVVP 355
Query: 618 GDGPIALVLGATRELAQQI 674
GDGPI L++ TREL QI
Sbjct: 356 GDGPIGLIMAPTRELVVQI 374
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/24 (58%), Positives = 21/24 (87%)
Frame = +2
Query: 539 QTGSGKTLAYILPAIVHINNQPPI 610
+TGSGKTLA++LP + H+ +QPP+
Sbjct: 330 KTGSGKTLAFVLPMLRHVKDQPPV 353
Score = 31.9 bits (69), Expect = 0.49
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1
Query: 382 GVEVHNXIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIV 510
G +V I+ + ++ + +K +G+++P PIQAQ PI+
Sbjct: 277 GKDVPKPIKTWVQSGLTSKLLDTIKKLGFEKPMPIQAQALPII 319
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/43 (44%), Positives = 24/43 (55%)
Frame = +1
Query: 379 VGVEVHNXIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 507
VG V I FE FP + + ++ G+ PTPIQAQ WPI
Sbjct: 141 VGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPI 183
Score = 31.9 bits (69), Expect = 0.49
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 539 QTGSGKTLAYILPAIVHI 592
+TGSGKTL Y+LP +HI
Sbjct: 195 KTGSGKTLGYLLPGFMHI 212
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +1
Query: 379 VGVEVHNXIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIVCLER 522
VG V FE FP + Q + G+ PTPIQAQ WP+ R
Sbjct: 595 VGENVPPPFMTFEATGFPPEILQEIHAAGFLNPTPIQAQTWPVALQNR 642
Score = 32.7 bits (71), Expect = 0.28
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +2
Query: 539 QTGSGKTLAYILPAIVHI 592
+TGSGKTL Y++PA +H+
Sbjct: 649 KTGSGKTLGYLIPAFIHL 666
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +1
Query: 379 VGVEVHNXIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIVCLER 522
VG E F+ FP + + V+ G+ PTPIQAQ WPI R
Sbjct: 171 VGNEAPAPFMTFQSTGFPPEILREVQQAGFSAPTPIQAQSWPIALRNR 218
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +3
Query: 621 DGPIALVLGATRELAQQI 674
DGP LVL TRELA QI
Sbjct: 251 DGPTVLVLSPTRELATQI 268
>06_03_0287 -
19168685-19168735,19168847-19168884,19169517-19169727,
19171461-19171643,19171879-19172028,19172161-19172256,
19172378-19172464,19172535-19172741,19172823-19173047,
19173150-19173261,19173397-19173453,19175522-19176882
Length = 925
Score = 37.9 bits (84), Expect = 0.008
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +2
Query: 509 YVWKEFSWRTQTGSGKTLAYILPAIVHINNQPPI 610
Y+ K+ + +TG+GKT+A++LPAI ++ PPI
Sbjct: 490 YIGKDVLAKAKTGTGKTVAFLLPAIEVVSKLPPI 523
>03_05_0865 - 28365430-28367640
Length = 736
Score = 37.5 bits (83), Expect = 0.010
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +2
Query: 539 QTGSGKTLAYILPAIVHINNQPPISE 616
+TGSGKT A++LP + +I PPISE
Sbjct: 360 ETGSGKTAAFVLPMLSYITRLPPISE 385
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 382 GVEVHNXIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIVCLER 522
G +V ++ + E+ + + V+ GYKEP+PIQ P+ +R
Sbjct: 307 GSKVPRPMRKWSESKLGTELLRAVEKAGYKEPSPIQMASIPLGLQQR 353
Score = 29.5 bits (63), Expect = 2.6
Identities = 25/71 (35%), Positives = 34/71 (47%)
Frame = +3
Query: 462 GLQRTDAYSSSRLADSMSGKNLVGVLKRVPAKRWPTSCQPLCT*TTNRLFRRGDGPIALV 641
GLQ+ D +A++ SGK VL P + T P+ +GP A+V
Sbjct: 349 GLQQRDVIG---IAETGSGKTAAFVL---PMLSYITRLPPISE------ENEAEGPYAVV 396
Query: 642 LGATRELAQQI 674
+ TRELAQQI
Sbjct: 397 MAPTRELAQQI 407
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +1
Query: 382 GVEVHNXIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWP-IVCLERI*LAYSNGFRQN 558
G +V + I F + P+ + ++ GY PTP+Q Q P +C + ++ G +
Sbjct: 174 GEDVPDPIMCFSSSGLPEKLVLNLEAAGYVMPTPVQMQVIPSSICNRSLLVSADTGSGKT 233
Query: 559 VG--LHLASHCAH 591
+ + +HC+H
Sbjct: 234 ASFLVPIIAHCSH 246
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 33.1 bits (72), Expect = 0.21
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 412 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIV 510
FE + V +GV+ GY+ PTPIQ + P++
Sbjct: 28 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLI 60
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 31.9 bits (69), Expect = 0.49
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 382 GVEVHNXIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIV 510
G +V + F + P+ + + ++ G +PTPIQ QG P+V
Sbjct: 174 GDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVV 216
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 31.5 bits (68), Expect = 0.65
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 382 GVEVHNXIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 507
G +V + F + P+ + + ++ G ++PTPIQ QG P+
Sbjct: 165 GDDVPPPSRSFGDLRLPEPILRALRGKGIEKPTPIQVQGLPV 206
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 31.1 bits (67), Expect = 0.86
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +1
Query: 382 GVEVHNXIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIVCLER 522
G +V FE A + V + V GY+ PTP+Q PI R
Sbjct: 76 GEDVPPPADGFEAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGR 122
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +2
Query: 518 KEFSWRTQTGSGKTLAYILPAIVHINNQ 601
++F TGSGKT+A+ +PA++H+ +
Sbjct: 130 RDFIGIAATGSGKTIAFGVPALMHVRRK 157
>03_06_0344 -
33276366-33276548,33277044-33277169,33277254-33277322,
33277401-33277505,33277595-33277633,33277717-33278016,
33278093-33278182,33278271-33278312,33278433-33278516,
33278762-33278947,33279218-33279403,33279663-33280025
Length = 590
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 518 KEFSWRTQTGSGKTLAYILPAI 583
K+ +TGSGKTLA+++PAI
Sbjct: 134 KDVMGAAKTGSGKTLAFLIPAI 155
>03_02_0189 - 6253659-6255380
Length = 573
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2
Query: 533 RTQTGSGKTLAYILPAIVHINNQPPISER*WSD 631
++ TGSGKTLAY+LP + I +E+ SD
Sbjct: 174 QSYTGSGKTLAYLLPILSEIGPLKRPTEQDGSD 206
>01_01_0602 -
4484972-4485450,4485949-4485997,4486108-4486237,
4486636-4486778,4486819-4486877,4487167-4487200,
4487489-4487629,4487719-4487907,4488027-4488122,
4488163-4488225,4488588-4489097
Length = 630
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Frame = +2
Query: 536 TQTGSGKTLAYILPAI-VHINN 598
+ TGSGKTLAY+LP + + I N
Sbjct: 154 SHTGSGKTLAYLLPLVQIEIEN 175
>02_05_0064 -
25529630-25531440,25531663-25531673,25533113-25533198,
25533412-25534259,25535385-25535736
Length = 1035
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2
Query: 533 RTQTGSGKTLAYILPAIVHI 592
++ TGSGKTLAY+LP + I
Sbjct: 636 QSYTGSGKTLAYLLPILSEI 655
>01_05_0722 +
24598426-24598649,24599113-24599219,24599319-24599374,
24599469-24599675,24599757-24599963,24600037-24600123,
24600167-24600208,24600209-24600304,24600406-24600621,
24600693-24600875,24601014-24601241
Length = 550
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +2
Query: 533 RTQTGSGKTLAYILPAIVHINNQP 604
+ +TG+GKT+A++LPAI ++ P
Sbjct: 117 KAKTGTGKTVAFLLPAIELLSTLP 140
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 436 YVQQGVKTMGYKEPTPIQAQGWPIV 510
Y+ + +G++EPTPIQ Q PI+
Sbjct: 156 YLVGNLSKLGFQEPTPIQRQAIPIL 180
>06_03_0337 +
19678152-19678484,19678616-19678801,19679232-19679417,
19680840-19680926,19681045-19681086,19681164-19681253,
19681399-19681503,19681797-19681835,19681914-19682018,
19682463-19682531,19682587-19682736,19683156-19683335
Length = 523
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/15 (73%), Positives = 15/15 (100%)
Frame = +2
Query: 539 QTGSGKTLAYILPAI 583
+TGSGKTLA+++PAI
Sbjct: 131 KTGSGKTLAFLIPAI 145
>01_05_0721 +
24594815-24594834,24595207-24595313,24595417-24595472,
24595562-24595810,24595871-24596077,24596157-24596243,
24596331-24596426,24596500-24596715,24596908-24597090,
24597222-24597449
Length = 482
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +2
Query: 518 KEFSWRTQTGSGKTLAYILPAIVHINNQP 604
K+ + +TG+GKT+A++LPAI ++ P
Sbjct: 44 KDVLAKAKTGTGKTVAFLLPAIEVLSALP 72
>01_01_0447 -
3327727-3328144,3328438-3328688,3328820-3328909,
3329061-3329159,3329240-3329353,3329450-3329555,
3329661-3329740,3329913-3330173,3330271-3330507,
3330635-3330922
Length = 647
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 518 KEFSWRTQTGSGKTLAYILPAIVHINNQP 604
K+ + TGSGKTLA+++P + + +P
Sbjct: 61 KDVAVDAATGSGKTLAFVVPVVEILRRRP 89
>12_02_1076 -
25862671-25863159,25863290-25863451,25863614-25863838,
25863939-25864037,25864584-25864992,25865094-25865221,
25865955-25866329
Length = 628
Score = 28.7 bits (61), Expect = 4.6
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 498 LADSMSGKNLVGVLKRVPAKRWPTSCQPL-CT*TTNRLFRRGDGPIALVLGATRELAQQI 674
L +M GK++VG K K L N G P+A+VL TRELA+Q+
Sbjct: 129 LEPAMQGKDMVGRAKTGTGKTLAFGIPILDAIIRHNEKNSPGKFPLAIVLAPTRELAKQV 188
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2
Query: 539 QTGSGKTLAYILPAIVHINNQPP 607
QTGSGKT A+ P I I PP
Sbjct: 200 QTGSGKTAAFCFPIISGIMRGPP 222
>09_05_0008 +
20042390-20042845,20043323-20043457,20043539-20043679,
20043771-20043882,20044084-20044154,20044251-20044405,
20044484-20044595,20044932-20045033,20045116-20045176,
20045251-20045422,20045512-20045608,20045692-20045786,
20045881-20046014,20046208-20046422
Length = 685
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 533 RTQTGSGKTLAYILPAIVHINN 598
R +TG GKTLA++LP + + N
Sbjct: 147 RARTGQGKTLAFVLPILESLVN 168
>03_01_0059 +
484305-484617,484919-485406,485608-486092,486185-486461,
486495-486626,486721-486893,486982-487204
Length = 696
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 539 QTGSGKTLAYILPAIVHINNQ 601
Q+GSGKTLAY+ P + ++ +
Sbjct: 285 QSGSGKTLAYLCPVVQNLRKE 305
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 533 RTQTGSGKTLAYILPAIVHINNQPPISER 619
+ TG+GKTLAY+ P + + + P ER
Sbjct: 67 KAATGTGKTLAYLAPIVHLLQMREPRVER 95
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 382 GVEVHNXIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 507
G +V + F E + D + + ++ Y +PTP+Q PI
Sbjct: 229 GHDVPPPVNTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPI 270
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 518 KEFSWRTQTGSGKTLAYILPAI 583
K+ + +TGSGKT AY+LP +
Sbjct: 121 KDVVAKAKTGSGKTFAYLLPML 142
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 412 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIVCLER 522
F E N + + + +GY++PTPIQA P+ R
Sbjct: 196 FLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGR 232
>07_01_0322 -
2258067-2258519,2258620-2258781,2258896-2259159,
2259196-2259294,2259723-2260131,2260223-2260350,
2261115-2261181,2262766-2262838,2262911-2263130
Length = 624
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 498 LADSMSGKNLVGVLKRVPAKRWPTSCQPLCT*TTNRLFRRGDG--PIALVLGATRELAQQ 671
L +M GK+++G + K P+ + G G P+A++L TRELA+Q
Sbjct: 124 LDPAMQGKDMIGRARTGTGKTLAFGI-PIMDRILRHNEKNGSGRNPLAIILAPTRELARQ 182
Query: 672 I 674
+
Sbjct: 183 V 183
>05_05_0226 + 23442971-23443857,23444209-23446324
Length = 1000
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 143 ATNSAIIRLDLATVAVDLEDLEDLVGKKNSLEVRTCVARL 262
A + ++LDL +A ++D +G+ + + RT VARL
Sbjct: 32 AQEAQSLQLDLRMIAAVMDDQLRAMGRATTADARTAVARL 71
>03_06_0531 +
34552206-34552598,34552665-34552735,34553363-34553369,
34553603-34553736,34553834-34554245,34554655-34554753,
34555059-34555283,34555652-34556029,34556412-34556555,
34556832-34556927,34557228-34557547,34557965-34558040
Length = 784
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 603 RLFRRGDGPIALVLGATRELAQQI 674
R RRG P LVL TRELA+Q+
Sbjct: 199 RSVRRGRIPRVLVLAPTRELAKQV 222
>01_04_0011 + 15067536-15068236,15068283-15068898
Length = 438
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +1
Query: 256 QIGILFHSNLSTKTFMIHILQFSKDHHMKSKSTE 357
++ ++ NLS K + +L+ +K+ H+ SKST+
Sbjct: 188 EVVVIVGCNLSGKEVALELLRVAKEVHLSSKSTK 221
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,540,272
Number of Sequences: 37544
Number of extensions: 352102
Number of successful extensions: 871
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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