Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060672.seq
         (691 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    30   0.079
EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.           26   0.97 

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 29.9 bits (64), Expect = 0.079
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +1

Query: 403 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIV 510
           ++ FE +   + V   V+   Y +PTPIQ    PI+
Sbjct: 173 VESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPII 208



 Score = 29.9 bits (64), Expect = 0.079
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = +2

Query: 539 QTGSGKTLAYILPAIVHI 592
           QTGSGKT A++LP I H+
Sbjct: 219 QTGSGKTAAFMLPMIHHL 236


>EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.
          Length = 452

 Score = 26.2 bits (55), Expect = 0.97
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 119 TVVPNLEEATNSAIIRLDLATVAVDLEDLEDLVGKKNSLE 238
           T++ +L+E   S +  LDL    +D  +L +L    +SLE
Sbjct: 140 TMLRDLDEGCRSRVQYLDLKLNEIDTVNLAELAASSDSLE 179


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 686,650
Number of Sequences: 2352
Number of extensions: 13855
Number of successful extensions: 26
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)